Array 1 685755-682781 **** Predicted by CRISPRDetect 2.4 *** >NZ_FORL01000001.1 Chryseobacterium indologenes strain DSM 16777, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 685754 47 83.0 30 A.CT.AT..CAT................................... CATTTTAATGCTTACAGAATCGTCTGATAA T [685731] 685676 47 100.0 30 ............................................... AGGTAATCAAATGTATAGTTGAAGAAGGGG 685599 47 100.0 30 ............................................... ATTTCTAAATCTCTCATTATACCGTCGACC 685522 47 100.0 30 ............................................... TTTGGAAGTTGGTAAATATCACAGATTTCC 685445 47 100.0 30 ............................................... AAACCTATTTTCTGGAAAATAGAAACTACT 685368 47 100.0 30 ............................................... AAACCTATTTTCTGGAAAATAGAAACTACT 685291 47 100.0 30 ............................................... ACGCATCTCTCCTATCTGCTTTGCTTTTCT 685214 47 100.0 30 ............................................... ACCATCGCCTGCGCCTGTTGGATAATATGG 685137 47 100.0 30 ............................................... CATAACATTATCGATTTCATTTTCTAATGC 685060 47 100.0 30 ............................................... TAGGTTCACGCGTGCTAATTCAGCCGCAAC 684983 47 100.0 30 ............................................... ACGAGATCGGATTCGATCTGGATTGACTTC 684906 47 100.0 30 ............................................... ATTAGTCATCATTTCTACCTTAATCGCAAC 684829 47 100.0 30 ............................................... AATATTGCTTCCAATTAGATGGCATTGTAT 684752 47 100.0 30 ............................................... TATCGTTATCTAGTCGAATTAAGCGTTTTT 684675 47 100.0 30 ............................................... ATTGTTTTTTCAGCCTCAATTCTTTTTGTT 684598 47 100.0 30 ............................................... GTGACTACAGCATTTAAATACCACATCACT 684521 47 100.0 30 ............................................... AGACACTTCCAAGGCATTAGCTATCTCTTG 684444 47 100.0 30 ............................................... AATTACACCTTGGGGACATTGGGCTGTTTC 684367 47 100.0 30 ............................................... TTACCTGTGACGTATCTGATATAATTTCAT 684290 47 100.0 30 ............................................... AAAAGGTATTGCAGTTTGGTTAATCAGCAT 684213 47 100.0 30 ............................................... TAAAGACAACATAAGGAGTTGCTACCTTCA 684136 47 100.0 30 ............................................... GAATATCCATTTTGAGCAAACAGCACTCCA 684059 47 100.0 30 ............................................... AAATTCGATATTTTGTCCCAACGTGGACTT 683982 47 100.0 30 ............................................... TCATCCAGACCGGAACTCATGAGCTTTTAG 683905 47 100.0 30 ............................................... GTTCTTCGTTTCGCCTTCCATGCTTCGAAC 683828 47 100.0 30 ............................................... ACGCTGTAGACAGATTTGTTTCGCCGCATG 683751 47 100.0 30 ............................................... GTAGCTTTTATGAAGTAGCACCCGGCGTAC 683674 47 100.0 30 ............................................... CAGGCAAAATTTCCCTTAAAGCGTTGGGGT 683597 47 100.0 30 ............................................... CGAACTGTGATTGCTTACCTTCGTTGTTCA 683520 47 100.0 30 ............................................... CGTAATAAACGATACAACTCAATTCTATAT 683443 47 100.0 30 ............................................... CACGAACGCCGTACGTTAGGGGGCAGCGCG 683366 47 100.0 30 ............................................... ACTCGCCAGTACTTTTAATGCTCTCCCACT 683289 47 100.0 30 ............................................... CTGTGACTTGCTGGCCGCCTTTAGGAAATA 683212 47 100.0 30 ............................................... GGGGCTTTTGATTTCAAAACATATAATGGT 683135 47 100.0 30 ............................................... GATGGGCTAGATGAATATATATATTATACG 683058 47 100.0 30 ............................................... TTGCAACTGTATATCATGAGACAGGTGCTA 682981 47 100.0 30 ............................................... TGCCCGCAGCAATGAAGCTAAGGAACTCGG 682904 47 100.0 30 ............................................... TTGTTCCGGTTCTTCAGTATTGAAAAGCCA 682827 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 39 47 99.6 30 GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC # Left flank : AAGGTGTGTTTCAAGGTCAGCCGGTTTTTTGTCTTTTTCAGTTACGGAAGCCGGATCAACTTTAATAGAAGTCATATCTATAGTAAAGCTTCCTGCTACAAGCTGCCCACCTTCAATATTCAGGTCGCCTGATTTTATGTTTAAGGTACCCCAACGAGGTGCAAAACCTCCTTTGTGGAAAGCTTTCCAGTTTACTACAGAAGTTACCGTATCTACTGCTAATGCTTCTCCTTTTCCTTCAGCAACAGACTGTTCAGTAGCTACTGCTGTATCGGTTGTTTTTTCTTTATTGTTACATGATACTGCCAGTAATCCTACTGCTACCAATGCAATTACGCTAATTTTTTTCATATTGAACTGTTTAAATAAGTTTGTTGAAATCTTTGTTGTTTTCGGTTACAAAAATAGAAAAACATTATTATTGACATCTTATCATATATCAAGAAATGCGATAAGACAGTTTATTTGAACTTATGAATAAAAATAATGTGATACTTAGA # Right flank : CTCAAAAAACAATCCACTGAAAATCAGTAGATTGTTTTTGTTTTTTAGGATTTTAAATTTAGAATAATTCAAGCTGTTGAAAAGTTGGAGGAGGTTCTTCTTTATTTCTGGCAAAAAATATTTCAATATCTCCAAATTGTTTATCCGTAATACACATAATAGCAACTTTTCCAGCTTTTGGAAGCATAAATTTCACTCTTTTAATATGAACCTCAGCATTTTCACGACTTGGACAATGCCTTACATACATTGAAAACTGAAATAACGTAAAACCATCATCAAGCAAAGATTTACGAAACCGGTTCGCATCTTTCATGTTAGCTTTAGTTTCTGTTGGCAAATCGTATAATACTAAAACCCACATAATTCGATAAGCATTAAACCTTTCGGCATTCATATCAATTTAGGATAAGAGATCAATCGTTTTTCACCTGTATAGCATTTATATAGAGACATGGCTGTTGTTTTTACTGCAATCAATAATGGTCTGATTTTATCAT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.60,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //