Array 1 8231-8431 **** Predicted by CRISPRDetect 2.4 *** >NZ_KQ971227.1 Prevotella bivia strain GED7760C Scaffold609, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 8231 47 100.0 30 ............................................... CGTTGGCAAATCAGATATCAGTCTACGCTG 8308 47 100.0 30 ............................................... TACTTCACCTTTAAGCACTTTCATAACACC 8385 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 3 47 100.0 30 GTTGTGTTTGATACCACAAAGATAGAAATTTTCAAGCAAATCACAAC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACAAAGATAGAAATTTTCAAGCAAATCACAACACTTACTCGAATGAGCATCTTCCGCATATTGTTGTGTTTGATACCACAAAGATAGAAATTTTCAAGCAAATCACAACACAAGTTACTACCAATACTGGGAAAAAGACGTTGTGTTTGATACCACAAAGATAGAAATTTTCAAGCAAATCACAACGGAAAATACAAACAATATCTTACTGTTGAGTTGTGTTTGATACCACAAAGATAGAAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACAAAGATAGAAATTTTCAAGCAAATCACAACCAACATTAAATAAAAACGCAATGCGAGATG # Right flank : CTTTACCATCTTCATCTTGATAGAAAAAGTGTTGTGTTTGATACCACAAAGATAGAAATTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACAAAGATAGAAATTTTCAAGCAAATCACAACAGGTATAAGGAGAAGATACAGGAGTTATCAGTTGTGTTTGATACCACAAAGATAGAAATTTTCAAGCAAATCACAACCGAGAGCATATACGTGAGTTTCTTAATCGAGTTGTGTTTGATACCACAAAGATAGAAATTTTCAAGCAAATCACAACCTAATCTTCTTGCTACCCATCTGGATAAGGTTGTGTTTGATACCACAAAGATAGAAATTTTCAAGCAAATCACAACCCAAAGTTCTGCTAATAAGACTCAAATGAGTTGTGTTTGATACCACAAAGATAGAAATTTNNNNNNNNNNNNNNNN # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGTTTGATACCACAAAGATAGAAATTTTCAAGCAAATCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.90,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 2 9077-9360 **** Predicted by CRISPRDetect 2.4 *** >NZ_KQ971227.1 Prevotella bivia strain GED7760C Scaffold609, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 9077 47 100.0 30 ............................................... TCATAACGCTTACGTATGACAACGAGCATA 9154 47 100.0 30 ............................................... GTAGTTAGCGCAAAGTGTTATATATCATTA 9231 47 100.0 30 ............................................... AGAATGCGGATACTAATCGTATGAATGCTA 9308 47 87.2 0 ....................................G.....TGTGA | A,C,T,GTA [9339,9341,9344,9347] ========== ====== ====== ====== =============================================== ============================== ================== 4 47 96.8 30 GTTGTGTTTGATACCACAAAGATAGAAATTTTCAAGCAAATCACAAC # Left flank : NNNNNNNNNNNNNNNNACAAAGATAGAAATTTTCAAGCAAATCACAACAGGTATAAGGAGAAGATACAGGAGTTATCAGTTGTGTTTGATACCACAAAGATAGAAATTTTCAAGCAAATCACAACCGAGAGCATATACGTGAGTTTCTTAATCGAGTTGTGTTTGATACCACAAAGATAGAAATTTTCAAGCAAATCACAACCTAATCTTCTTGCTACCCATCTGGATAAGGTTGTGTTTGATACCACAAAGATAGAAATTTTCAAGCAAATCACAACCCAAAGTTCTGCTAATAAGACTCAAATGAGTTGTGTTTGATACCACAAAGATAGAAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACAAAGATAGAAATTTTCAAGCAAATCACAACTCGAATAAAAATTATTAATTATGAGTTCAT # Right flank : GGAACTGCA # Questionable array : NO Score: 2.70 # Score Detail : 1:0, 2:0, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGTTTGATACCACAAAGATAGAAATTTTCAAGCAAATCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.90,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-11.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //