Array 1 175500-174273 **** Predicted by CRISPRDetect 2.4 *** >NZ_VNWR01000053.1 Acinetobacter baumannii strain A42 NODE_8_length_228822_cov_21.207923, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 175499 28 100.0 32 ............................ ACCCGGAGAACACATATACAAAGGTTTGTTAT 175439 28 100.0 32 ............................ AGAAGATGGCGAAATTAAGGTAGTCAAAAATG 175379 28 100.0 32 ............................ ATCTGCAACAGTTGTATAAGCAAAAGCAGGTA 175319 28 100.0 32 ............................ TTACAACTGGGATGGCCGAAAAGTATGTGAAG 175259 28 100.0 32 ............................ CAAGACATTCGACTAGAGCTAGTTAAGCAAGC 175199 28 100.0 32 ............................ TATCGTAATCGTAGCGTTTAAACGCTTATTTG 175139 28 100.0 32 ............................ GAAGATGGCGAAATTAAGGTAGTCAAAAATGA 175079 28 100.0 32 ............................ GATTATTTTTATGTCACTAATCCAAATCTTGG 175019 28 100.0 32 ............................ TTATTTGCAGCGTTTAATACAGGCGTATTTGT 174959 28 100.0 32 ............................ TAAATAGTTTTGGTGAAGCGATTCAGCCTTTT 174899 28 100.0 32 ............................ TAAAAAACGTGGCGAGGAGCGCACTACCGTAC 174839 28 100.0 32 ............................ TTACCTACGAATGAAACAGTTCAACTTATTTT 174779 28 100.0 32 ............................ GACACCCCAGCATCATTGGGAACACAAATTAT 174719 28 100.0 32 ............................ TGGTCTGGTGGGCGTGGTGGAAAGCTGTCAAA 174659 28 100.0 32 ............................ TTAGCAGCATTCGCATTTGCAGTTTTGTTTTC 174599 28 100.0 32 ............................ CTGAGCAGTTGTCTGGTTATTCTGGTTTGAAT 174539 28 100.0 32 ............................ CAAATCAAAAGTGCAGTTGCTGCCTCAATAAC 174479 28 96.4 32 ...A........................ TGAGGGTGCCACACATTGGCAGGTTGGAGTGT 174419 28 96.4 32 ...A........................ TCTTCATCTGTTACATATGAAGCAAGGATCTT 174359 28 96.4 31 ...A........................ ACATTCAAAGAGGCTCATCGAATCCAATCGA 174300 27 78.6 0 A..T........TC........C.-... | A [174296] ========== ====== ====== ====== ============================ ================================ ================== 21 28 98.5 32 GTTGTTCATCGCATAGATGATTTAGAAA # Left flank : TTTAAAAATAGAGGCCGTTTTACCTGCATTTGCCTGATAATCAGTTGGAATAAGGAAGTCTTCATTTAATAAAGTTCGAGCACTAAGATAAGGTAAATCAAGTGCTTGTTGCTTACTTAATCGAATTCCACCTTTTTCAATATTGGAATTAATCGTCTTTAAACTAAAGTGCACCGATTCTTCTAAAGCGTTTATAAAAATATCAGTTTGTGGTTCAGGCATTATCTTCCCCGTTTTTGTTATCTAGCCAATTTTTAACACATTATTTGAAAAATGAAAGTATTGAAGTTGAGAGCTGCGACAAATTAAGTCGTAAAGACAATTGGATGAAAATATTATATGCTTCATAAATTTAGCCTAAGACGATTAGGTTATATTTTTATAAAATTAGAAAAATTAATATAATTCAATAGATTATATTGTTCTTCTATTTTGAAGGTTTTTAATTCATTAAAACTTTATATTATTGTTTTTAAGAGTTTTGTTTTTACTTAGCTCTA # Right flank : TTTAAAACGACATGTTTTGTCGTTAAAAGGCCGTATTAAGCTGATAAAAACTTTCTCTTTTTAAAACAAAATATTATATTTTTATTACATTCGAACTTTAACAATAAACTATGCATGTCATTTTCATCTCGGCTTGTGAAAAAAGAGCTTTAAAGAAAACTCGAGCGATTTTGGATAGCTATGCTATTCGTACAGGACATTCATCTTGGCAAGCACCAATGACAATGGAAGGTTTAAAAGAAATTCGTAGCGCATTAAAAAAAGTAGCCACCCGACAAACTGCGGTAGCCGCTTACATTAATTTTGGTGTACGCAGAATGAAGCTTGCATGGGTTGTGGGAGCAAAACATAAATTTGCACACGATGGTGCATACCCAGTTGCATCGACTAAGAAACAGCAAAAGTTACTCATGCTTGATGAGTGGGTCAAAGTAAGTAGCTTGTTGGCAGGTGCAGCAGGAGACATGCATGATATTGGTAAGGCATCCCAGCATTTTCAG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: R [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [70.0-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 180595-183803 **** Predicted by CRISPRDetect 2.4 *** >NZ_VNWR01000053.1 Acinetobacter baumannii strain A42 NODE_8_length_228822_cov_21.207923, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================== ================== 180595 29 100.0 31 ............................. TTGCCATGCTTGATATTGCGTTTGAGCAAAT 180655 29 96.6 31 ............................T TGTCCTGAGCATCATAAACACAATAATTCCC 180715 29 100.0 31 ............................. AGCGCTCTTGGGGCTTTGTTGAATCCGATCC 180775 29 100.0 31 ............................. GGCTTAATCCGGGAGTGAAAAAAATGAATAA 180835 29 96.6 31 ............................T TGGAAAAGCCACACTCACACAATTGGGAAAT 180895 29 93.1 31 A...........................T TATAGCCATTAAATGCGAAGATTGAGGCTAA 180955 29 100.0 31 ............................. CCAGCTTCGTCTCCACCGCCAGCTTTACCGC 181015 29 100.0 31 ............................. AAAACCCCCGCCCAATATAGTGGCATCTTCG 181075 29 96.6 31 ............................T TTACCTTTAATAAAAAACAACTTGTTAAAAC 181135 29 100.0 31 ............................. GCATGATTTAGTGTGATAGTGTTCTTTCCCC 181195 29 96.6 31 ............................G TTCGGCTAAAAGAGAGGTGTGTTTATAAAAC 181255 29 96.6 31 ............................C TAGTTTGGGGAATACGTCGGGTTTTTAGGCT 181315 29 96.6 31 ............................T CCATCAATTTAATGCAATCAGATTGGCTTAC 181375 29 100.0 31 ............................. CTTTAGTTGATGAACAAGTTACACAGTTCAA 181435 29 96.6 31 ............................T GCACCCCTGCCCCGCCTGTAATAGCAGATGC 181495 29 100.0 31 ............................. CTCAGTAATACAGTAAGTACCATCAGGGTTT 181555 29 100.0 31 ............................. TAAATAGGAACCGTAACTGTAAAATCCTGAA 181615 29 96.6 31 ............................T GCATTTGTGCACCAAACTTAGTCTGTTGCTC 181675 29 96.6 31 ............................T GGAACAAGCTAAATGCTATTTTTCAATGATT 181735 29 100.0 31 ............................. TACTAGTATTGTCATTGAGATATCCCCTGTG 181795 29 96.6 31 ............................T ATCGAAAATGGAAAGCACTCTTTTTGCAATG 181855 29 96.6 31 ............................T AGTTATTTAGTTACAAGGCGTTTACAAATGA 181915 29 96.6 31 ............................T TCAGGTCGCATAATGCCGACTATGTAAAATA 181975 29 96.6 31 ............................T TCAGGTCGCATAATGCCGACTATGTAAAATA 182035 29 100.0 31 ............................. AGATGGGGTAGGGGTTAAATCTACCATTTAT 182095 29 100.0 31 ............................. TGCGCCTTCGCTAGACTTCGGTTTGCATCGT 182155 29 100.0 31 ............................. TAATGTTGTTGTAGAGAAGAAAGCAACAGCT 182215 29 100.0 31 ............................. TTAACGGCGCAGACAATCCAAAAGAAACGGC 182275 29 96.6 31 ............................T CTTCAATAATTTGAATAAAGCTACCCAAATA 182335 29 96.6 31 ............................T GAAAAAAGGTGAACCATGTTTAAAACCAAAA 182395 29 96.6 31 ............................T AAGTATGTGAATGGCAAGGCTGAGCGCTGGG 182455 29 96.6 31 ............................G AGATAAGTAAAACTTAAGGAAGCTGAATGAA 182515 29 100.0 31 ............................. TCAGGTTGTTTGTTGACTAGGATTTTCCCAA 182575 29 96.6 31 ............................C ATCTGAGCCAATAGTCATGGTGTTAGCATCG 182635 29 96.6 31 ............................G CACGAATACGCTGAGATGTGCCGCCGTGAAG 182695 29 100.0 31 ............................. CAACCAGTAGGCGGCATATCGCAATATGTAG 182755 29 96.6 31 ............................G TATCGATCCAAGAACTTGCAGAGGAACCAGA 182815 29 96.6 31 ............................T GTCCAGCCTTTAACCGTATTTAACGGTATGT 182875 29 96.6 31 ............................T GTTGGTGAAACCATGGTTAATGGTGTTTGTA 182935 29 100.0 31 ............................. AAAACAGCATTTCCAATTTTAATGAAAAATA 182995 29 100.0 31 ............................. TATCAAATTCACTCATCCCTCAGCTCCCGAT 183055 29 96.6 31 ............................T AAAAAGGGCCTTGATTTAAAAATTGTTAAAG 183115 29 100.0 31 ............................. AACTAAATCTTCGGGCCAATTTTTACGTCTG 183175 29 96.6 31 ............................T AGTATTACTGGCAGCCAATAATAGTTCTTTC 183235 29 96.6 31 ............................C AACACGTGCTTGGGAAATGATGGCAGGCGGA 183295 29 96.6 31 ............................T TCTGCCGCATTTTATCTACTCCCAACACGTG 183355 29 96.6 31 ............................T GAACAGGTGATCGCTTTGTTATCTGCCACGA 183415 29 100.0 31 ............................. CTCACTCATCATCCCAATGTTGCTGCAAATG 183475 29 96.6 31 ............................C TGAACAGTATGCCGATTTAATGAATCCTGAA 183535 29 100.0 31 ............................. GTTACGCAAAAGCCAGTTGATTGTTATGTCT 183595 29 93.1 31 ............G...............T ATCATTGCGCGACAGAACGCATCAATTAATG 183655 29 86.2 31 ...GC.......CC............... GATCTATGCAAGATTTATTGGTCTACATTAG 183715 29 89.7 30 ...TG.......................C AAGCTGATGCTTCCTTATGGTTACAGTCAG 183774 29 82.8 0 .G..C...................AT..T | G [183778] ========== ====== ====== ====== ============================= =============================== ================== 54 29 97.2 31 GTTCTTCATCGCATAGATGATTTAGAAAA # Left flank : ACGTTGGGCCAAAACGCTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAGTTTATTCGTGATGAAGGCAAAAACTCTCATGACTCTATTGCGGATATAGCCAACAGCTACCTTGATCATGGAAACTATATTGCCTATGGCTATGCAGCAGTTGCTTTAAATGGAATGGGAATTAGCTTTGCCTTACCTATTTTACACGGTAAAACACGTCGTGGAGGTCTAGTCTTCGACCTCGCTGATCTAGTTAAAGATGCTTTTGTTATGCCAGTCGCTTTTACATGTGCAGCAAAAGGATTAAATCAAAAAGAATTTCGAATGCAACTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGATATATGTAGTAAAATCAAATAAAATCATATATTTAATCTAAGTACCTCATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : TTTGAATCTTAAAAGAAAAAACCCCGAAACTTTCGTTTCAGGGCTTTTCACGAATTTTGGTGGAGATGGCGGGAGTTGAACCCGCGTCCGCCAGCACTACGCTCGAGAATACTACATGCTTAGATATCGTCTATTGTTTTAACACCAAGTGACCCGACGAACAGGGTACAAAGTGCGATCCTCTAAGTTTGGTATAAAGCCCCGAGGCTTGACTCTATACGGACTTGTGTGCGTGCGCTTCAGTCGGGTTCCCAGACCACAAGTATTCTAGGAAGCGGACAAGCGGCCCTTAGGCAGCTAGAGCGTAAGTTTCGTCGTTTGCGACTATTTAAATGCAAATTTTATTTACGAGAGAAAATGCGCTCTCGGCATGCATCTATGAGTTTCATCACCGGCGTCGAAGCCAATAACATCCCCATGAATGTCTGCACATCATAGCATAACTAAAATAAAATGCTGTGCATTTTATCAACAGTCTGCCACTGATGAACATACTTACA # Questionable array : NO Score: 5.64 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.52, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //