Array 1 191865-193220 **** Predicted by CRISPRDetect 2.4 *** >NZ_WEOM01000003.1 Pediococcus acidilactici strain FAM20579 FAM20579_scf0003, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 191865 36 100.0 30 .................................... ATTAAAATAAAAAATGCTTTTCAAGGATTA 191931 36 100.0 30 .................................... TCACTAAGTCAATTGCTGGGTACACTCCGG 191997 36 100.0 30 .................................... GCTTTTTTAATTTAAAATATTTTAATTCTT 192063 36 100.0 30 .................................... GGTTATCGTCATCATCATGGAGAAGATATC 192129 36 100.0 30 .................................... TCTGCAAACAAGGAACGTAAGTTAAAATCT 192195 36 100.0 30 .................................... GCCCGAGTTATCTTAGACAACGCTACATTA 192261 36 100.0 30 .................................... GCCCGAGTTATCTTAGACAACGCTACATTA 192327 36 100.0 30 .................................... AGACGTTTATTACAATGCGCTACGTGTGGC 192393 36 100.0 30 .................................... AAGCATTCTAAATCGCTCGTGCCAATTGTG 192459 36 100.0 30 .................................... AAGTTAGAAGTCTAACGTTATAATAAATAT 192525 36 100.0 30 .................................... CTAAAGTTAATGACGTTCTTGTAAGTCCGG 192591 36 100.0 30 .................................... TAACTTTTTTAGGTCGTTAGTGGCTACATG 192657 36 100.0 30 .................................... AAATCACCTAAATCACCTGAGCCATTGACT 192723 36 100.0 30 .................................... GAAAAACTAGCTAAACAAAACGAAGATTTA 192789 36 100.0 30 .................................... CCAACAGACAGACCCGCAAAGCTTTCCTTT 192855 36 100.0 30 .................................... TGGTGTTTTCACCCGGTTTTGGAACACTGT 192921 36 100.0 30 .................................... ACTACAACTTCTACTTCTAAAGAGGTACCA 192987 36 100.0 30 .................................... TAAATTTTCAAGCGCGCCGTTATTGAGTTC 193053 36 100.0 30 .................................... TAGCCATATTCCCTTTTTCTAACTTAATCA 193119 36 100.0 30 .................................... ACTAGATGAGAACAATGGCTTTGAAAAGTT 193185 36 94.4 0 .................G................A. | ========== ====== ====== ====== ==================================== ============================== ================== 21 36 99.7 30 GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC # Left flank : CCAAGATTTAGTTATTCAAAAGTATTTAACTAAGATTGAACGGGTTTTTGCCGAAGGATTGGTGGATGAGCAACGTAACCAAATTCACGATCAGGTCAACCAACTATTTAATACGATTGCTGAACAATTATTTATGCTAGATTTACCGATTAGCGTCAATTATGATTTTGATTTGAAAAAGTTACTGAAGTATTGTGGAGTGCACTTTGATCCGCTAAGCGTGGGTAACCCGTATGGTATAATTGAAGCGATTTTGAAGATTCACGAGGAGTGCGCGATTAATTCGTGTGTCGTGTTAACTAATGTTGCACATTATTTGACAGCGACCCAAATTGAAGAGCTTACCCAGCTAGTAAGTCAAACGAATCAAGCACTCTTACTAATCGAATTCACAGAAATAGGTAATCAGGAGGCCTATGGAAATAGCGAATTCTACTACATTGACAATGACTTTGTTGATTGGCATCGATAATTGATGAAATTTTAGTTAGAAAATAACG # Right flank : CTGACTGAAATTAATAAGAGTTAATGTTTTAAGGAAGTTATCAATAGTATTAGTAGTGAACTTTGAAGAATGGAATTTTAATGAAACTACTAGTTACGGAGAATGATAAACTACTAAGGTTCAAATGAATTTATAGGTTTAGCATTATTACTCGAAGACGACGTTTTAGTGGTGGTTGGAAATAAAATCCGCTCGAAATGATCGGGTGGTTTTCAGTTTGTAAAAGTATACCAATATATTGATATAGTAAATGCATAAAGTTAAGAAAGTGATAAAAACTGGATGATGAAGAATAAAAAGGCATCGCAATAAGCAAATGACAATAGTGACACTAATCATTCAGACGATTACAGCTATTGTACAACTCATCACAATGCTTAAAAAATAGGTAAAAGAGGCGATACGTCTCTCTTCTGTTCATCAATTTTAAAATGGAGGCATTAAAATGAAAAACATAGAAAAACTACAATATTTAACTTTGACTATCAGTGTCGTTGCTC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.10,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //