Array 1 36126-35892 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFLWC010000031.1 Enterococcus ureasiticus strain DIV0861b scaffold1.31, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================== ================================= ================== 36125 34 97.1 32 .................................C AATCGGTAGAATCGTATTCAACGCTTCTTCTT 36059 34 97.1 33 .................................A TTTTGGAAAGTGCCTGGTATATCTCTTCAAAGA 35992 34 97.1 33 .................................T GGTATCGATCAAGACGAATGTTTTGATGTCATG 35925 34 100.0 0 .................................. | ========== ====== ====== ====== ================================== ================================= ================== 4 34 97.8 33 GTCTAGCTCTGTATAGAGCTAGTGGATTGAAATG # Left flank : AGATGGTTATCCACCATTTCTATGGAAGTAGGTGAAAAGTATGTTAGTTTTGATCACTTATGATGTAGCGACAAGTTCGAAGAATGGAACTCGCCGTTTGAGGAAGGTAGCAAAGAAGTGCCAAGATTATGGACAGCGCGTTCAAAATTCTGTGTTTGAATGTGTTGTTGATGCAACTGAATTAACTAAGTTAAAGAAAGAACTGATTGATTTAATTGATGAAGAATTAGACAGTTTACGTATTTATCGATTAGGAAATAATTATCAAAATAAAGTAGAACATGTAGGGGCAAAAGAGAGCTTTGATGTGGAAGCACCATTGATATTTTAATAAGAAAATTAGGTGCGAACCATAAGTGCACATGAAATCACTGGGAGACTCGCACCTAAATTTAGCTGTTTTTATCAATAAAAAGCTGTTTTTCTCATGTGAATTTAATTTTACATGTGTTTTTGTGTGGAAATGCAAAAATATGTCGTGTATTTTTGTCAATTTCACG # Right flank : TTTTAGGTTATTCCTCTATTATGCACCCCTACAAGTCTAGCTCTGTATAGAGCTAGACTTCCAAATTTCAACTACAATGTTTGACATGAACATAACAGGCACCATCCAATACTACGGCAGTTAACTCCATATAAAATCAAATAATTAAAAGAAGACAACCAAGCATTTTAGCCTGGTTGTCTTCTTTTTTATCCATTAAAAAATCCAATATTTAATCATCAAAAGGTAAACAAAAATGAAACTAGAAGTTATATTTATAAAAGGTATAATAGAATGACATGGTGTCATTTATATTCGTGCGTCTATCTAATCATTTTACTCACTAATCTAACACACACACATAATCATTAAACAAAAAAGACCTAAAAGGATAGCTATAGATAACTCAAAAAACACAGAAATTTTACATAGCAGAGCGAATAAATAAAAAAATAGATCTGAAAAAGGTTATTTTTTTTAACGAAAAAACTATTTTATATATGTTATTTAAAATAATTTAT # Questionable array : NO Score: 5.44 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTAGCTCTGTATAGAGCTAGTGGATTGAAATG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.61%AT] # Reference repeat match prediction: R [matched GTCTAGCTCTGTATAGAGCTAGTGGATTGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-5.70,-5.70] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [60.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 17638-17807 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFLWC010000026.1 Enterococcus ureasiticus strain DIV0861b scaffold1.26, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 17638 33 100.0 36 ................................. ACGATCAATGGTTGCAATGGTTGCTAACAATGCTTC 17707 33 100.0 35 ................................. TGCATTATTGACAAGTTCTAAAACAGTTTTATCAG 17775 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ==================================== ================== 3 33 100.0 36 GTCTCACTCTTTATTGAGTGAGTGGATTGAAAT # Left flank : AATGACCAATGCTCAAGCAGGAGAAAAAAACATGACGATCAGTGCGGTACATGCAGGGAAAATATTTGTTGATATTTTGGGTAACAATGAAGCAAAAGTAACTTTGGATGAAACTGGTGGTGGCATATTTCCTGTAAATGGCGGAGAAGTTTCTGTTTATGTAAATGAAGAGATTGTAGAGAAGTTGAGTAGAAGAATCGATGGTTTGGCTATGTAAGGCGCATAGTGGAGGAGAGTGCGCGTTACTTTTACTGAGTGATATGTAGATTAGAGCGTGACTTTTATTGAAAGAATAATTATACTAAGAGTAGTGACTCTGTAGCTAGAATATATGTAAAATTGGTGCGAACCTTAAGTGCACACGAAAACACTAGAGGACCCGCACCATAATTTGGGTAGAAAAGGTGTTGAATAGGTTTTTTTCTCATCAAATTCACATTTTTTGACTGAAATAATGTGGGAAAATAGTTGATATGTAAGTTGTTTATTACTTTTTCACA # Right flank : TGTTGTCGTTAGTCTTTTTTTGGTTTATGTTATTAGTCTCACTCTTTACCGAGTGAGTTTTTTATTTTTACTAAAATCTACAAAAACAATAAGTAAAGTTGATTTGTCACTAGAATTACCATCACACAAAAAGAAAATATTGTTCCAAGAATTCCATCATTATTAAAGAATTTTTGTCCTATATTTGGTATAATGTATAAGATTGAAAAAGAGAGAGGACGTTGATGATGGCACAAGAAAACGCCTTGATCCAAGGTATGAATCCGAGACAAAAAGAAGCCGTTCTACATACTGAAGGGCCTTTATTAGTTATGGCGGGTGCAGGTAGCGGGAAGACAAGAGTTTTGACTCACCGTATTGCCTATTTAATTGAAGAAAAAGATGTTAACCCATGGAATATTTTAGCGATCACATTTACCAATAAAGCCGCAAAAGAAATGAGAGAGCGGGTTGGAAAATTATTAGAAGTTGGCGGAAATGATGTTTGGGTTTCGACATTT # Questionable array : NO Score: 8.67 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCACTCTTTATTGAGTGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.64%AT] # Reference repeat match prediction: F [matched GTCTCACTCTTTATTGAGTGAGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.70,-2.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [75.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.37,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 37215-37581 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFLWC010000046.1 Enterococcus ureasiticus strain DIV0861b scaffold1.46, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ================================== ================== 37215 33 100.0 33 ................................. ACAAAAATTTGACGCTTAGCTTGCTAAAAAAAG 37281 33 100.0 34 ................................. ATGAGAAGGCATTTTTGCATATCCTAAAGAACCA 37348 33 100.0 34 ................................. AAACTGGGAGTTCCAAACCCAGGATATGACAAAG 37415 33 100.0 34 ................................. AATCAGGATATGCTATGAAGAGTCTAGGCAGTGG 37482 33 100.0 34 ................................. CTATGTGCATCTACCTTGAAGATCAATTCTCCAT 37549 33 93.9 0 ..........................G.....C | ========== ====== ====== ====== ================================= ================================== ================== 6 33 99.0 34 GTCTCACTCTAATATGAGTGAGTGGATTGAAAT # Left flank : AATATGGTGACGGCGGAGCAGATATTTTACCATTGTTCCGTTTGAATAAACGTCAAGGCAAGGCTTTGCTGAAAGAATTAGGCTCACCTGCTGAACTCTATACAAAAATCCCTACTGCTGATTTAGAAGATGATAAACCTTTGGTAGCAGATGAAGTAGCACTTGGTGTGACTTACGATGATATCGATGATTATGTTGAAGGAAAAGCTGTATCGGATAAAGCGAAAGAAAAGATTGAAGGTTGGTATAACAAAACACAGCATAAACGTCATATGCCGATTTCAATTTTTGATGATTTTTGGAAATAAGAGTTAGAAAAAAATGAACATTTTTGGTGCGGACCTCAAGTGCCCATGAAATCATTAGGAGACCCGCACCAAAATTAATGGAGAAAAGGACTTGATTTTGAATTTTTCTCATTTTTTTTTAATGTTTACGTTGATTTACTTGGAAAAATAAGGATTATGAATGATTTATGGAAGATAATCTTATTTTTCACG # Right flank : CAAAAGTTGGTAGAGTACCTTGTTCGATAGTTGAAGGTCTCACTCTAAAATTGAACGTATCAAAAAACACTAAAATCAACAAAAAAGAAAGACTAAAAAACTAGGCTTTCTTTTTTTATATCTAAATTTCAAATCAAACTACCTTCATTTTGTTCAAATGGTTAAAAAAAGTGTAAAATTAAACTAGTTATCTGAAATATTGGATAAACTATTCTACAATTGGTTTAACTACAGCAATAAGAAGGTGAATGAAAAGGTGAAAAAATTGTTTAGGAAAAAAAGAGATATAGATAAAGAGGAGTTTTCCCCATCAGAAGAAAAAGCACAAAAAATCAATGATAACGATATTCGGATTCCAACCGATATAAAAGGCTTGTCCGATCAAGAAGTACAACAAATCTATGCAGAAGGTAAGACCAACAAAGAAGTCGAAGATCTATCTAGAACGACGAAACAGATCATTTTAGATAACTCACTGACATTATTTAATTTTATCAACT # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCACTCTAATATGAGTGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.71%AT] # Reference repeat match prediction: F [matched GTCTCACTCTAATATGGAGTGAGTGGATTGAAAT with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.70,-2.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //