Array 1 2016-2304 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAERMS010000076.1 Prevotella illustrans strain A2931 NODE_76_length_2304_cov_194.122721, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 2016 30 100.0 34 .............................. CTTCTTCCGTGGAGAAGAAGTGGGTGGTTTCGGC 2080 30 100.0 36 .............................. TTGGTGCAGGACGGCTGAAAGGAATGTCAGACGTGA 2146 30 100.0 35 .............................. GAGAAAGGAGGAAAATTATGAGTAACGAAAGGGCA 2211 30 100.0 34 .............................. CATTGAGCGGATTAGGCGGCATTGTAAACAGTTT 2275 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 5 30 100.0 35 GTTTTAATCGTACCTTAGTGGAATTGAAAT # Left flank : TTTAAGATGTATTGGTAGAGATATGTATGTGATATTGATTTATGATGTGGGAGTGAAGCGTGTGGCTAAGATGCTTAAACTATGTCGACAATATTTGTGTTGGATTCAGAATTCTGTGTTTGAAGGAGAATTATCAGAGGTAAAGTTGAGAGAACTGGAATTACGGTTGAATGGCATTATAGATAAAAATGAAGATAGTGTGATAATATTTTCAAATCAAATGGGTTATCATATGAGTAAGGAGATTCTTGGGAAGGAACGGATGTCCACAGATAACTTCCTCTAAAGTTGTCGATGTCATTGTTGGCTCATGTCACGATGAAAAAAATGGGTTAAAAAGTGCATGCCGGTAATAGTGTGAGGCCTCTGTTTTAAGGAAGTTGTCGAAGTCTTAAGTAAAACATTCTTTTCAGCATCGACATATTTTTATTCGTTTTTTATATCTTTGCATAACAAAAACTATAGTGTTTATTATGTATTGTGCATATTTTCTCTATGGG # Right flank : | # Questionable array : NO Score: 9.06 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAATCGTACCTTAGTGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.80,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0 Confidence: HIGH] # Array family : NA // Array 1 26-1545 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAERMS010000058.1 Prevotella illustrans strain A2931 NODE_58_length_10989_cov_97.993689, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 26 30 100.0 34 .............................. CTTTTTCTTCAGGTCATTAAGCGCGTTGATCTGC 90 30 100.0 34 .............................. GACGTCGGGGATCTTGATATCGAGGACTTTGGGC 154 30 100.0 34 .............................. CGGGTGATGATGAGCATCTGCAGCTTCGATAATT 218 30 100.0 34 .............................. CGTTTCTGAGTAGGGAGACTGAACAGGAAATAAA 282 30 100.0 34 .............................. AGTCTCTAATCCTTGCACTAACACAGCGTGGAAA 346 30 100.0 34 .............................. TTTATCGTGCTTCTTTCCGTGTCGAGACAGAACG 410 30 100.0 34 .............................. TCGGACTTATATATCTCTACTTCATGACACCCGT 474 30 100.0 37 .............................. ATGATATATCTGAAATGATAAAATTGGACGACAAGTT 541 30 100.0 37 .............................. ACGATGAGAAAAATTCTCAGACGGAATGTAACAGAAT 608 30 100.0 36 .............................. ACGATACCGCCGTTTGCGAACGCGCCGCTGATGGAG 674 30 100.0 35 .............................. AAGTTCTCTGCCCCGATATAACGGCGCAAGTCATT 739 30 100.0 34 .............................. ATTTTATTACCAAACAATCTGATTTTGGGAAATA 803 30 100.0 34 .............................. TAGATAATTCCTTTCACCCCTTCTTCGATATGTC 867 30 100.0 35 .............................. TCTGCTCGCTCGTTGCATGCGTAAGCGATGCAGGA 932 30 100.0 36 .............................. TTTGTATTTCAACGGGAAAACCAAGAAATACATTTC 998 30 100.0 35 .............................. ACATACAATTCCGATTAGTATTGATATTGGAATGG 1063 30 100.0 34 .............................. ATGATCGTGGCCATGGCGGCGTCGGTACCGGTGT 1127 30 100.0 35 .............................. GTTTCTCACTCTGTTCAAAGAGTGTCCGGTACTTG 1192 30 100.0 34 .............................. CGACGAATAATCTTAATTGTGCGAATTGTGTCAA 1256 30 100.0 35 .............................. GCAGTTGTGTACAGCGGGTTGTTGGCAAACTCATA 1321 30 100.0 36 .............................. ACGTAACCTATTTACCTGACCAAACAAACGGGTATT 1387 30 100.0 35 .............................. ATCATTGCGACTATCACTATACAAATATACCGAAT 1452 30 100.0 34 .............................. TTGATGCAGAAAAACGCACAATAAAAGTAGAAAA 1516 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 24 30 100.0 35 GTTTTAATCGTACCTTAGTGGAATTGAAAT # Left flank : GATTAGGCGGCATTGTAAACAGTTTG # Right flank : TACATCCTGCAAGTAATATGTCAGTTCGGAATAAGTTTTTCTAAAATCAGCAGTGTGCAATGCTTGATTGCCAAGGCGGAACATGATGAATCACGCCCCTTCGACTCACGCCACGCCGCTTTCCGGTAGACGCAAATCTGTCTTTAGAGAAAAAACTTATCCCGAACCGTAATAATAATCTATTTTGCCCTATTCCTTTGCTGGATTAAGAATTTTGAAAGACCGTTTTCTGATTCTTATTTTGGCTCACTCGATAATTTGTGGGGACAAGCCTGCAAGCGATGAAGTCATATAAATCTGTCAATCGTTTATGGGAGCGGGAGAGACGCACCGATGATGATTCAGCGCTTCCGTTATTTTTGTCAGAAAAAACTACCAGATTTTAACACTTCCGCAACATGTCATTTAGCTGCCGAAATGCCGAAAAAGTCCTTCGCTTTGTCGATTTCGACACCCTTTTATGCCCAAAGCTATGCTTTTATCGGCTCAAAGCATAATTT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAATCGTACCTTAGTGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.80,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [25.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.27 Confidence: HIGH] # Array family : NA //