Array 1 8284-10298 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZCN01000066.1 Loigolactobacillus coryniformis subsp. coryniformis KCTC 3167 = DSM 20001 Scaffold66, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 8284 36 100.0 30 .................................... GTCGGTTAAAATTCCAGTGGCTGCCAGCAA 8350 36 100.0 30 .................................... CGAAGCGCTGGAAATTGCTCCTATCGGTCA 8416 36 100.0 30 .................................... TGATTCGTCAGAAATTCTTAAATCGTATTT 8482 36 100.0 30 .................................... TTTTTGAAATGCTGTTGATCGATGTTTAAT 8548 36 100.0 30 .................................... GATCATTAAGCCGATGCTCATGATCTTTGT 8614 36 100.0 30 .................................... ACCGAACGTGATCGTAACCGCCACCCTCTA 8680 36 100.0 30 .................................... AAAAGAAATGACAATTAAGTATGAGTGCCA 8746 36 100.0 30 .................................... TTACGTTAGGGTTTTTAGCTTTGAACTGTT 8812 36 100.0 30 .................................... TAAAAATCAATTCTGGTTTTGGAAAGCCAT 8878 36 100.0 30 .................................... CATAATTTTCTAAAATTTTCTGGCAATCGT 8944 36 100.0 30 .................................... TTATTTCAAAATGGGAATCTATAACTTGGC 9010 36 100.0 30 .................................... ACCGTCACTAAGCCGCCTGAAACAGTAGCT 9076 36 100.0 30 .................................... AATGGATTGATCCCATCGGACTTAGCAACT 9142 36 100.0 30 .................................... GTAAACGGCCGCTTGAAGGCGCCCTGACTG 9208 36 100.0 30 .................................... TACGTATGAAAGCACGATTACATTACCAGT 9274 36 100.0 30 .................................... TCCGGTAGATCCGTCAGTCCTGGAGACGCT 9340 36 100.0 30 .................................... ATACGCGGTCACAAAAACACCCCAAGGGTA 9406 36 100.0 30 .................................... TTGTCGTACCCACATAAGTTTCACCTTCCT 9472 36 100.0 30 .................................... GGCAGATTAATAATAGCGGTATCGTCATCA 9538 36 100.0 30 .................................... GGGAGTATCATAACCACCCATATCAGTCGT 9604 36 100.0 30 .................................... GGCTGCTTAAGCGTGCTTAAGGCTTGTCTA 9670 36 100.0 30 .................................... CCGGATTGCTGTTGCAATAAATAATTGTCC 9736 36 100.0 30 .................................... GGCAAATTATGGCGTTAGTCAACCTGGCGT 9802 36 100.0 30 .................................... TTTCCTTTACCTTACAAGACTTATTATATA 9868 36 100.0 30 .................................... CCTTTCCTTATCTTATGAGCCTAGTATATA 9934 36 100.0 30 .................................... CACTTTGCGTGTCGTAATCGTAAAAGTCCT 10000 36 100.0 30 .................................... CGGTTATATTCGGCCAAGAATTGAGCGTAC 10066 36 100.0 30 .................................... TCAATAAGCGATTAGTAGCTGTTGATTTTT 10132 36 100.0 30 .................................... AGAATATCATGGCTATCAACGACTGTTTCC 10198 36 100.0 30 .................................... AGGCACCCTTCGAAAAATCGTCGGCGACCT 10264 35 80.6 0 .............C..........-C....GT..AA | ========== ====== ====== ====== ==================================== ============================== ================== 31 36 99.4 30 GTTTTAGAAGAGTGTTAAATCAATGAGTTTAGAACC # Left flank : GCACTGACTTAAATAAATTGTTTCTGCCACAATTGTACAAGCAAATTAAATTAAATTTAACTGCTGAACAAAATCGAATTATTACGGATCAAAGCCGTACGCTAAAAAATGTAGTACTTGAAGCGACTTACTCGCTGGATCTACCGCTAAATATCGGCGACCAAATTGCAACTGAAAAAGTTTTAAAATTTTGCGATCTACACTTTGATACTTCTTTATCAACTAACTGTTATGGTATAATAGAGACAATTCTAAAAACAGCTAAAGAATTAAATGAACAGCGTATTTTAGGTTTTATGAACATTTCTGATTATCTTACATTACAAGAGTTACAAGATTTATTTGAGTTGATCAGAACATTGGATTTAACCGTTCTTATTATTAAATTCTCAGAAAATCAGAGGTCTGTAGAATTTAATAATTGCCGGTACTACTATATTGATCAGGATTACGTCGATTGGCGTTATGAGTGATTCTGAGAAGATAATGTGGAAATAACG # Right flank : ATAGCGCCTAATTGATGGCGCTATTTTTTACAATCAAATTTAGTGCATTTCCGCGCAACATCACCGATAATACAGGTAAATCTGCGGACAAGGTGGTGGCGTCATGACACCGGTGCAGGAAGCACAACTTAATGACATTTACAATTTGATCCTCAACCCAGCAACTCGTGACTGGGAGCGAGCGCAACTAGTTAAGCTGAAAAAAGCCGTTGCTGCAGGTGCTACTTTTAATACGGAGTTGGCACGGTTGGAAGCTAGCTTACGACCTTTGGCGGTACGCGATAATCTGACTCCCGATATGACTGATTTTTATCACAAAATTACCGGTGAGCCTGAATTGGCCGCCAAATTTGATCTTTCCCGCCACTATGCGGCCGACCAGCCGTATGAAGCGCGGGCAATTTTCGCCGGTGGTTGTTTTTGGTGTATGGTTGAGCCGTTTGATGCGCGACCAGGGATCATCGCGGTGATTTCGGGCTATACTGGCGGTCACACCGAAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGAGTGTTAAATCAATGAGTTTAGAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: F [matched GTTTTAGAAGAGTGTTAAATCAATGAGTTTAGAACC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //