Array 1 312499-312850 **** Predicted by CRISPRDetect 2.4 *** >NZ_PDOF01000002.1 Bacillus lacisalsi strain YSP-3 ZB100001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 312499 29 96.6 35 .....G....................... CTCGTACGTTTCCCAGAATAGGAAGACCTTGGTGC 312563 29 96.6 39 ......T...................... CTATCGAGCGATGTCCTCCGCTGCTCTAACGAGGCCCAT 312631 29 93.1 29 ...............TG............ CTTGTCAATATAGATTGTCTCTTTGTCTT 312689 29 100.0 38 ............................. TTCCATGGTCGTTTTACCCTGTTTCACGGTCGTGAACA 312756 29 93.1 36 .C.C......................... ACTGTAAGTTCCTTTGTTGGCTTGAACCGCCAGTCG 312821 29 93.1 0 ......................G..A... | T [312848] ========== ====== ====== ====== ============================= ======================================= ================== 6 29 95.4 36 GTTTAACTTTAACAAGTGTTGTATTTAAA # Left flank : TCAGCACCGCCTCCATATTTCGAGGCAAGTAACTCGGTATAGTTTAGAATTGGCGTCTGCCGACCGATTTTCGGATGTGTAATGAGTTTGAGTCCAAAAAAATTCTGGACATGCTAATTAAGCATTTTGGGTTAAGTGGTGGTTCGGACGAAGAGGTAGAGGACGTAACCAAACACAATGCCTATGATACGATTAGTACCTTGAAGGCGATGCTTTCACAAACGCCGTAATTGATATTTTGATTGGTGGCGGTATTTTGAGTTTGTTAACTGTGGAGGTTTGGTGTCGGATTAGGTTTAATAAATCACATTTTTTTAGGAACGATGATTTTCTAACCTCCAAATAACATTTATTTTCTGCGAAGGTTAAGGAGTCAATGGATACATGGTTTTCTGTATGAAAATTGAAATTCCATCGACCGGTTAGAGAATAACAAACGAAATCCTTTTGTATGAGTTGTTTCAGCGTGATATAATAAAATGAAACTTGATTTAATAGGC # Right flank : ACATAAAAACCACCCTCAGTAAAATGCTAGGGTGGTTTTTTGTTCTATATTTTTCTGGAAGTCATCTTAGGCTGTGTGAAGTGAAGGAGATAATCGGGGCCACCAGCTTTAGAGTCTGTCCCGGACATGTTGAATCCTCCGAATGGGTGTACGCCAACAAGAGCGCCTGTGCATTTTTTATTAATGTAAAGGTTCCCGCAATGCATATCTTCTAGGGCTTCCTGTATTCTCTTTTCATTTTTGGAATGGAAAGCCCCGGTTAAGCCATAGTCTGTATTGTTGTAAAGTTGAATTCCGTGTTTGTAATCCTTCGCCTTCGTAAGGGCGAGAACAGGGCCAAAAATCTCTTCTTGAAAAATGCGAGCATTTTCATTAACGTCCTTGAACACAGTTGGTTGAATAAAGTAACCTTTTGAGTCATCCCCGGTTCCGCCTACAAGAAGTTCCCCTTCGGATTTTCCTACATTTATATAATCCATAATCTTATTAAAAGCTTTTTT # Questionable array : NO Score: 3.94 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAACTTTAACAAGTGTTGTATTTAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.10,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 2 315639-316110 **** Predicted by CRISPRDetect 2.4 *** >NZ_PDOF01000002.1 Bacillus lacisalsi strain YSP-3 ZB100001, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== ==================================================================================================== ================== 315639 26 61.5 100 G..ACGGCTA...........GA... TTTATAGATGGGAGTTAAAAGGTTAGAAAAGTGAGATAGAATTCTTTGTATCAGGGATTTTAGCATGATATATTAAACATAGACCTCATTTACTCAGTTT T [315657] 315766 26 100.0 37 .......................... ATCGTCTGGGTGCGGGCTGTAGAACATGGTGACAAAA 315829 26 88.5 38 ........G...TC............ CGAGCTTTTAGCCATAGCCATGTTAATGTCGAACGTGT 315893 26 100.0 37 .......................... ATCGTCTGGGTGTGGTGAGTAGAACACTGTGGTGACA 315956 26 88.5 38 ........G...TA............ CTGGAAGACGCCCCCCACCATGTTTTAAGGGTCTAGTT 316020 26 88.5 39 .........T..GG............ TTTTTCGGGGAAGCGGACTTAGTCACACTGAATTTTGTT 316085 26 80.8 0 .......TG..TG..G.......... | ========== ====== ====== ====== ========================== ==================================================================================================== ================== 7 26 86.8 48 TAACTTTAACAAATGTTGTATTTAAA # Left flank : TTATAAAACAGGAAAAGACGTAGAAATCCTTGATGAAGTAAGTGCGAACCTACGATTGTGTAAAGGGGCATACAAGGAGTCACAAGAGGTGTCCTTCTCCGAAAAATTTGACGTTGATAAGAACTTCCTTAATAATATTAAGAAACATATGATTAATGGGAACTATGCTGCCGTAGCTACACATGATGAAAAATCCATAGAGGAAATAAAGGGGTTTGTGGAGAGGGAAGAGATAGTAAGAGATAAATTTGAGTTCCAAATGCTTTATGGTATCAGGAAAGAGTTGCAGGAAAAACTGGTCGAAGAGGGTTTTAAGGTACGAGTGTATATCCCGTATGATGAAGACTGGTGGGGTTACTTTATGAGGCGGTTAGCTGAGAGACCGGATAATGTTGGTTTCGTTGTAAAGTCAATGTTCAAAAGATAAATCTTTTTCTATAACGCAGAAATACAAAGCGACAAAAGCAGTATCGATATAATTTTATCTAATTGAAGATAGA # Right flank : AAAAGATGTTCATCTAGCAATAAACAACTTTTACATATGATGTAGCGTGACGTACGGTATTAGACAAACTCCTTTCAGAGTTTGTTTTTTTTATTTTCTGAAAATAAGCATTGACTAGGAAAAAACTACCTGTTAACCTTTGAGTAAGTCAAAGATATTCATTTAGTAATGGCCTTTAAAAAATAAATTATAGTTGCCTTTTCTACAAAAATGAAATGGGGGATTCACGTGGATATTAAAGAGCTGAAAATAACGCTCATCTTAAAGGAGGATGTGCCTTTCAAAAATATTGGGCAAAGAATCGGAGCGTACTTACACCGAGCCATGCTAGCCGACTCTCAGTTGAAAAAAGAGCATAGAGTTAACAAAGTGAAGCACTATGTATATAGTCACCTTTATCCGACGGAGAGTGATGGTGTTTATAAATCTGGGACAGGTTACACTTTTAGAATCAGGAGTGCTAGAGAGGGGTTCCTAAATAGGATGGCAGAACTCCTAAC # Questionable array : NO Score: 4.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.34, 5:0, 6:0.25, 7:-1.03, 8:1, 9:0.56, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TAACTTTAACAAATGTTGTATTTAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:84.62%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [11-11] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA //