Array 1 588957-588449 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAGJUB010000002.1 Enterobacter hormaechei strain S43-1 E38_2, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	============================	=================================	==================
    588956	    28	 100.0	    31	............................	TATCGCATCTTCATCGTCAGATAACTTTTCC  	
    588897	    28	 100.0	    32	............................	TTAACCGCCAGCATGGTTTTAAGGTAGTAGTC 	
    588837	    28	 100.0	    32	............................	AGCTACGCGCACAGATTGCCGCTACGCAGCTT 	
    588777	    28	  96.4	    32	............G...............	TTTGATTTGAATGGTAGTGGCTTGCCGATTGG 	
    588717	    28	  96.4	    33	............G...............	CAGGTCTTGTTAATGATGCTGTAGCCCATCTGA	
    588656	    28	 100.0	    32	............................	GTTCTGCCGCTGTGGAAGTGGGGGGTAATAGG 	
    588596	    28	  96.4	    32	..G.........................	ACTGAGATAAACGCGCCGCAACAATCACACTC 	
    588536	    28	  96.4	    32	..A.........................	ATTGAACAGATGCGTAAAAGTAACCCTGTTCT 	
    588476	    28	  92.9	     0	..G............A............	|                                	
==========	======	======	======	============================	=================================	==================
         9	    28	  97.6	    32	GTTCACTGCCGTACAGGCAGCTTAGAAA	                                 	       

# Left flank :   CTTCCGCAAACGCAGCCCGTTTGCCGTTGTCTCGGTGCTTATCTGGACGTAGTCAAAACCGAACTCGCAGAATCATTGAGTGATTTCCGGGTGGTTGAATTTGACGACGAGACGGAACGGCTGAAGGAAAAAGAGTGGCTTCTGGAGGATACCGAAACCAAATGCGATTACTGCCGGGCATTAAACCACGTGCTGCTGGTGTCGCATTTTGACCGCGAGATGCTGCCCCACCTGACAGGATTGCTGCATGACATTACACATTCGATGGCGGCAGATGTGGCTGCACCTGAATGTGGAAAGCCTGTAATTCATATCATCAATTAAGTTTAGTGTCGCGCGTCGGGGGAGGAACTCCGGCGCGATATGGCGCAACCCTTTTTTCGAGTGGTTCTTTAAGTTATTGATTTTTATTGTGCGAATAAAGCCGCAGAAAAAAGGGTTTGAGGTAGATATGTTGATTATTTTCTTTTCGAACAATAAGATGGCGAAGATTTCTTCCA
# Right flank :  TCATCGAGTGTAAGGCTGTGTGATTTTATTGTGCGCACCACCGTACAACCAACACAAAACCCAACCAATCGTTCAAATAATCGACTGTACTAACAAAAAAATAAGGCCGGGAATATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGCTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATATAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGTTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCCTCAATTAAGTAAAGAATTGCGCGTTTAAAACGCAGCAAAACAGTCTCAGCGTATTGCCCAAGC

# Questionable array : NO	 Score: 5.95
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.81,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTCACTGCCGTACAGGCAGCTTAGAAA
# Alternate repeat :   GTTCACTGCCGTGCAGGCAGCTTAGAAA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [6,8] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-7.70,-8.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [4-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [55.0-68.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.92   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
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