Array 1 104436-104227 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE384102.1 Thermomonas fusca DSM 15424 G582DRAFT_scaffold00015.15, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================== ================== 104435 29 100.0 31 ............................. TCCGAACGCGGCGAACTTTGGGCGGGACTTG 104375 29 96.6 31 A............................ ACCCGACGCGCAGCCGCGAGCAGAAACCGTC 104315 29 100.0 31 ............................. AGTGCCGTTCAGAATCCAGGTCGCGCTGAAT 104255 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= =============================== ================== 4 29 99.2 31 CGTTCGCTGCCGCATAGGCAGCTCAGAAA # Left flank : TGCAGCAGATGCTGGACAGCGTGTTCGCTGCCGCATAGGCAGCTCAGAAAATCAGCCTGGGCCGTGGCTGCGCCGATACCTTGTTCGCTGCCGCATAGGCAGCTCAGAAAATGCGATCACCGAGCCGGTGCCGACGATCACCGTTCGCTGCCGCATAGGCAGCTCAGAAAGACTACATCATCGACCGCACCGCCGACGGCCGGTTCGCTGCCGCATAGGCAGCTCAGAAATTGCATGTATCCCCAAGACAGGCGCTCGACGAGTTCGCTGCCGCATAGGCAGCTCAGAAATTGTAGCCGAAGCTGACGTTGCCGTTGAAGTTGTTCGCTGCCGCATAGGCAGCTCAGAAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNG # Right flank : AAAAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTTCGCTGCCGCATAGG # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGTTCGCTGCCGCATAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CGTTCGCTGCCGCATAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-11.00,-11.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [6.7-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,5.24 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 105874-104646 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE384102.1 Thermomonas fusca DSM 15424 G582DRAFT_scaffold00015.15, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 105873 28 100.0 32 ............................ AAAAGTCCAATAGGCGAAACCCAACGCGAACG 105813 28 100.0 32 ............................ TGTTTATCGGGCGACTGGCAGACGAAAATAAA 105753 28 100.0 32 ............................ GACAGCGCCAAGGCGGTTTTCTGACATGGCCG 105693 28 92.9 32 ....................GC...... CACCGCTGCTGGCAGCTACGTGGTGACAGTGA 105633 28 100.0 32 ............................ GCTGCCGGGATGCCGTGGTGTCGCCCTACCTG 105573 28 100.0 32 ............................ ACCTCCCGCGCCAGCACCTTCGACACAAGGTC 105513 28 100.0 32 ............................ CCTGACGTGGTCCGCCGATGTCCTGCCGCCCG 105453 28 100.0 32 ............................ TAATGTTGATTGTCAATAGGTCTTTCCTAACT 105393 28 100.0 32 ............................ TTCAGGTAGTCGGGGCGGTTGAGCACCAGCGC 105333 28 100.0 32 ............................ AGCAGGCCGAGCGCGTGCGCGCGAACGTGGCC 105273 28 100.0 32 ............................ CGCTCGGAGCTGCCCGCCTACCCGGCCGACGA 105213 28 100.0 32 ............................ AACCTGCACCAGTGGAAGGAAGCGGCCATCGC 105153 28 100.0 32 ............................ AGGAGGATCGCGCCAGCGATGGAAAGCGTCTC 105093 28 100.0 32 ............................ GGCTTGCCGGGGCAGGGCAGCGGCACGGTCAA 105033 28 96.4 32 .................G.......... TCAATGCGCACGAACTGCACGTCAGCCGGATA 104973 28 100.0 32 ............................ GGTCAGACTGTGCAGCAGATGCTGGACAGCGT 104913 28 100.0 32 ............................ ATCAGCCTGGGCCGTGGCTGCGCCGATACCTT 104853 28 100.0 32 ............................ ATGCGATCACCGAGCCGGTGCCGACGATCACC 104793 28 100.0 32 ............................ GACTACATCATCGACCGCACCGCCGACGGCCG 104733 28 100.0 32 ............................ TTGCATGTATCCCCAAGACAGGCGCTCGACGA 104673 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 21 28 99.5 32 GTTCGCTGCCGCATAGGCAGCTCAGAAA # Left flank : GCTAGGACCAGCGCCATGGCGATGTATGTTCGCTGCCGCATAGGCAGCTCAGAAAAACTGGCCGCAGTGCAGCCCACCGCCGCCGGCGTTCGCTGCCGCATAGGCAGCTCAGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCAGCACCG # Right flank : TTGTAGCCGAAGCTGACGTTGCCGTTGAAGTTGTTCGCTGCCGCATAGGCAGCTCAGAAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGTTCGCTGCCGCATAGGCAGCTCAGAAATCCGAACGCGGCGAACTTTGGGCGGGACTTGAGTTCGCTGCCGCATAGGCAGCTCAGAAAACCCGACGCGCAGCCGCGAGCAGAAACCGTCCGTTCGCTGCCGCATAGGCAGCTCAGAAAAGTGCCGTTCAGAATCCAGGTCGCGCTGAATCGTTCGCTGCCGCATAGGCAGCTCAGAAAAAAAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCATAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCGCTGCCGCATAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-3.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,5.24 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 106997-106259 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE384102.1 Thermomonas fusca DSM 15424 G582DRAFT_scaffold00015.15, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 106996 28 100.0 32 ............................ ATGCCCGCGCGCTGGAACTCGGCTTGCAGCCA 106936 28 100.0 32 ............................ ACAAGACCGCGGACGAAGTGCTGCCCCACTGC 106876 28 100.0 32 ............................ GATCGCAGTGGATGCCGTGTCGCTGGCAAGCA 106816 28 100.0 20 ............................ GCCGAANNNNNNNNNNAGCA Deletion [106769] 106768 28 100.0 33 ............................ GCCGAATGTGACCGGGCGCGACGTGATCCTGGT 106707 28 100.0 32 ............................ GAGTCGTCGAACGCGCCGATGCCGCTGTTTGC 106647 28 100.0 32 ............................ CGCAGCGGGCGCCGTGGTGCAGTCCGACCCGG 106587 28 100.0 32 ............................ GTCAGCGCCGCACCAGCCATGCACTGGCGGCA 106527 28 100.0 32 ............................ TGGGACTTCTTCCACCCCGGCGTGCCGCGCCC 106467 28 100.0 32 ............................ GCCACGGAGGCACTTGCCGCATGACCACCGAA 106407 28 100.0 33 ............................ GTCGCTGCTAGGACCAGCGCCATGGCGATGTAT 106346 28 100.0 32 ............................ AACTGGCCGCAGTGCAGCCCACCGCCGCCGGC 106286 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 13 28 100.0 31 GTTCGCTGCCGCATAGGCAGCTCAGAAA # Left flank : | # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCAGCACCGGTTCGCTGCCGCATAGGCAGCTCAGAAAAAAAGTCCAATAGGCGAAACCCAACGCGAACGGTTCGCTGCCGCATAGGCAGCTCAGAAATGTTTATCGGGCGACTGGCAGACGAAA # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.06, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCATAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCGCTGCCGCATAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.24 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 49735-50844 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE384103.1 Thermomonas fusca DSM 15424 G582DRAFT_scaffold00023.23, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 49735 28 100.0 32 ............................ TGGAGGCGCAGCTTGATCGCGGGGTGTTGCCG 49795 28 100.0 32 ............................ AATTTGAGCCGGGGCTGTATTCGGGCGGCGAC 49855 28 100.0 32 ............................ TGTACCGCTCGGCGTCCGCAATTACTCCGGCC 49915 28 100.0 32 ............................ TGATGGGTTCGTTGTTCTTGCTTAGGAAAGAC 49975 28 100.0 32 ............................ TGTACCGCTCGGCGTCCGCAATTACTCCGGCC 50035 28 100.0 32 ............................ TGATGGGTTCGTTGTTCTTGCTTAGGAAAGAC 50095 28 100.0 33 ............................ TTTACGACCGTGATTGATCGTGGCGTAAACAGA 50156 28 100.0 32 ............................ GTGGCGGGTCGTGTTCCTCATGGGTTCGTTGT 50216 28 100.0 32 ............................ GGAGTCCCGCATCGAGCTTCGTTGGTGGAAAT 50276 28 100.0 32 ............................ GTCGTGGCGCAGCCGGCCGCGCGCCCGGAGCT 50336 28 100.0 33 ............................ AAGTGGTCGTATGGCGAAAGGCTCATTTCGTTC 50397 28 100.0 32 ............................ ACCTTTCTTGCCACCCGGTTCACTTTTCGAGC 50457 28 100.0 32 ............................ GTCTTCAGCCGCCCTTACACCTTCGCCGCGTG 50517 28 100.0 32 ............................ ACCTGCGCCACCTGCCGGCGTGCCGGTGCGGG 50577 28 100.0 32 ............................ CGTTGATTTAATTGGAGGCCGAGGTCGGAATT 50637 28 100.0 32 ............................ TGGATGTCGATGCTGGTGGCACCATTCGCCAC 50697 28 100.0 32 ............................ AGGCATCCCCGCGCCTGCGTTTCGTCGCCATC 50757 28 100.0 32 ............................ TCATCGTCGAACGTCAAATAGAGCGGGCGAGG 50817 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 19 28 100.0 32 GTTCGCTGCCGCATAGGCAGCTCAGAAA # Left flank : GGGACTCCTCCAGTTCCTGAAAACCGATTGGCTCAAGGGCATGCGTGACCATGTGCGCTTGAGCGAGATCGCCGAAGTCCCGGCCGATGCCCGCCATCGAACCATTCAGCGCCGGCAGTACAAGACCAGCGCCGAACGCCTGCGACGCCGTCGCATGAAGCGCAAGGGCGAAACAGCGGAGCAAGCCCGGGCCGCCATCCCGCACACCATCGAACGCCGCCCGGATCTCCCCTACCTGCATCTGCACAGCCGCAGCACTGGCCAGACGTTTCATCTGTTCGTTGCCTTGGGCCCTCTTCAGGAAAAGCAGCAAGCTGGTTCGTTCAGCAGCCATGGACTGAGTGCCAGCACCACCATCCCCTGGTTCTGACCCTTTTCCACCGGGAGTCACCCGGCTCTTTGGAAATCAATACCTTGCGCATGCCCCCGAGAAAACGGGGGCATGCTTTTGCTGCTGCTTTTCCCCTATGATCTCAATGGCTTAACGGCCATCACGTCTA # Right flank : ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCATAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCGCTGCCGCATAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [51.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 51928-53156 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE384103.1 Thermomonas fusca DSM 15424 G582DRAFT_scaffold00023.23, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 51928 28 100.0 32 ............................ TGTGAGGCATATGTTGCGAGGTCTGGCAACAC 51988 28 100.0 33 ............................ ATCATCACAGGCGCACGTCTCCATGACCAAGAA 52049 28 100.0 32 ............................ GCGTCGCCAGGCTCGCCGACGGGCTGCGCCTT 52109 28 100.0 32 ............................ TACCCGGCCGACGAGTTCGCGCGGAACCTGCC 52169 28 100.0 32 ............................ GTTCAAGTCACCGAGAAGATCCAACCGGTCAG 52229 28 100.0 32 ............................ CGACTATGGCAAGATGCGGAACAAGGACTATC 52289 28 100.0 32 ............................ AAGTCCACCGCCGCGAAGGTCGGCACCGGCCT 52349 28 100.0 32 ............................ TTGTCGAGCCTGCGCAGGTTCTCGCGGGCGTC 52409 28 100.0 32 ............................ TCATCTTTCGTGCGGCGCGCATCGGGGTTTAT 52469 28 100.0 32 ............................ AAGTCCACCGCCGCGAAGGTCGGCACCGGCCT 52529 28 100.0 32 ............................ TTGTCGAGCCTGCGCAGGTTCTCGCGGGCGTC 52589 28 100.0 32 ............................ TCATCTTTCGTGCGGCGCGCATCGGGGTTTAT 52649 28 100.0 32 ............................ AGCGCAATTCGATGCGGCCATCCTTCGACAAG 52709 28 100.0 32 ............................ AGCCGCTGATCAAGGAAGGCAGCTGGTTCCGG 52769 28 100.0 32 ............................ TGTCGCCGTGCAGGAACTGCACGCATCCCTGG 52829 28 100.0 32 ............................ GAACAACTCCAGCAGCGCGGTGGACTTCTTCT 52889 28 100.0 32 ............................ GCCGCCGCTGCGCGCGCTCGCACAAGCCAATC 52949 28 100.0 32 ............................ TGAGCGGGCACTACTGGAAGTGCGTAGGCAAG 53009 28 100.0 32 ............................ AAGCAGCACGCGAACCTTGTCCAGTGATAGGC 53069 28 100.0 32 ............................ GGCAACCCGAAAGGCAACCCGAAGTTATGAAA 53129 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 21 28 100.0 32 GTTCGCTGCCGCATAGGCAGCTCAGAAA # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : AGCAAAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCATAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCGCTGCCGCATAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-6.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //