Array 1 1580112-1578822 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_GL397187.1 Neisseria meningitidis ATCC 13091 SCAFFOLD1, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
   1580111	    36	  94.4	    30	........G...A.......................	TTCTATTATAAAAGCTGCCTGACTTACTCG	
   1580045	    36	 100.0	    30	....................................	TCAGGGCTATCGGGGCTGACCGGTTTATTG	
   1579979	    36	 100.0	    30	....................................	ACGTGAGTTTGTCTATGAGTTCGACGGCGT	
   1579913	    36	 100.0	    30	....................................	GAGCATTGACACTATTTGTATGGCGTTAAG	
   1579847	    36	 100.0	    30	....................................	AGCATTTGGGCGGCACGGGCAAAGCCGTCA	
   1579781	    36	 100.0	    30	....................................	TCCATGTGAACTCGTTGGCGCGTTCGATGA	
   1579715	    36	 100.0	    30	....................................	TAAACCTCTGTCGGTTGGTTTGCTTAGATT	
   1579649	    36	 100.0	    30	....................................	CGAATTGGAAAAGTTGCCCTACCGGTGGGG	
   1579583	    36	 100.0	    30	....................................	GTCGCATGGTAAAATAACCACCGCTTTACA	
   1579517	    36	 100.0	    30	....................................	AAACTAAAACTTTGGAAAGTTGGAAAGTTG	
   1579451	    36	 100.0	    30	....................................	CGGCGCATCCCCTTTAATTTAATATCACTT	
   1579385	    36	  97.2	    30	............A.......................	CGATGCGGCTTCCTATGCGGACAATCCGTT	
   1579319	    36	  97.2	    30	............A.......................	ATAGAACCTATGGCTGCTACGGCGTTGACA	
   1579253	    36	  97.2	    30	............A.......................	TTTTGTGGAGTTTTGTTATGAGTGAGGGCA	
   1579187	    36	 100.0	    30	....................................	CTTTAACTTTGACCGTATGCAATCTAGTTA	
   1579121	    36	 100.0	    30	....................................	AAGCATTGACGATATTTGTGTGGCGTTGCA	
   1579055	    36	 100.0	    30	....................................	CCGTCGCATTCGGCGCGCTCATCGGCGCGA	
   1578989	    36	 100.0	    30	....................................	CGTCTGAAGGTTTGCCCATCTCCTGACAGG	
   1578923	    36	 100.0	    30	....................................	GCCTGTTCCGTCCTTTGCTTTTCTTCCTTG	
   1578857	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
        20	    36	  99.3	    30	GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	                              	       

# Left flank :   GGAAACGGTCGATGTGTTTGGCAATCATGGCTTGGGCGGTTTGCTGGAAGAAGGTGTTCATGAGAAATCCCCTAAATGTCTTGGTGGGAATTTAGGGGATTTTGGGGAATTTTGCAAAGGTCTCATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGATTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCTG
# Right flank :  ACTTCGACGGGAAATCCTTATTTCATAAGGGTTTCCCGTTTTATTTGTTATGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACACAGTCTGTTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATTCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACGCCGGCTTGAAATGACGAAATCATTTTGTCGATGGCAGCCAAGGTG

# Questionable array : NO	 Score: 6.22
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:55.56%AT]
# 	Reference repeat match prediction:         R [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-0.90,-0.40] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [66.7-53.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.68,4.5   Confidence: HIGH] 

# Array family : NA
//