Array 1 91485-93440 **** Predicted by CRISPRDetect 2.4 *** >NZ_NLXZ01000037.1 Escherichia coli strain MOD1-EC6423 MOD1-EC6423_37_length_128183_cov_49, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 91485 28 100.0 32 ............................ TTATGCATCTCAGGTACTGAGATATTTTGTGG 91545 28 100.0 32 ............................ TGCATGTAGCGCCACGCCGTGACCACCGTCCT 91605 28 100.0 32 ............................ ATACAGTAGCGAACAACTGGCAAGGGGGGCTA 91665 28 100.0 32 ............................ TGATGAAAGTATCCTTTGCCACGTTTTTCCTC 91725 28 100.0 33 ............................ TGGACGCTGATGATCTGAGCGACGAGGAAAAAG 91786 28 100.0 32 ............................ CCGACAAGTAAATCCTGTGCGCCATCCTGCGG 91846 28 100.0 32 ............................ TGAATCCCGGAAAGAAAATTTTGCAAATCAGG 91906 28 100.0 32 ............................ CCGCGTCATCCACCGCCAACGCTGGAAATTCC 91966 28 100.0 33 ............................ GTATACGGCACATTTATAGACCCCGAGCAACAG 92027 28 100.0 33 ............................ CCAAAAACTGGTGAACGCGGATTACCCGGTCAA 92088 28 100.0 32 ............................ ACATCATGAACGCACAGCAAAATGCCGCGATT 92148 28 100.0 33 ............................ AAATACGGCATTTGATGGTTTTGTTGTCGCCAT 92209 28 100.0 32 ............................ CAGATATCGTGCCGCACCGATCGTGACGAGCA 92269 28 100.0 32 ............................ ATACCGCCATCAAGTGTAATGCCCTGATCCAT 92329 28 100.0 32 ............................ ATGTACGCGAGATACGCGTGATAGAGATAAAC 92389 28 100.0 32 ............................ GTCTCGAAGGGTGAGATGCCGAATCGTGGTGA 92449 28 100.0 32 ............................ ATCAACATGACACCCGATTGTATTCAGGAATT 92509 28 100.0 32 ............................ GGTCGGTGAATCGCTGCATCGCGGTTCATATA 92569 28 100.0 32 ............................ GCAAAAGCCGCCCCCATGAACGCTGCAAAAGG 92629 28 100.0 32 ............................ TCAAGCCCTGTATCAGCGTCAACCCCGAAATA 92689 28 100.0 32 ............................ TGAATACCTTTGCCTGCATAAATCGCCATATG 92749 28 100.0 32 ............................ AACTTGTAACGGCAAACGTGGGATACGAACTC 92809 28 100.0 32 ............................ CTGACAAAAATCCGTTAGGCGCGGAAATGATG 92869 28 96.4 32 .........T.................. AACTGGCGGCGGTCGCCCACCTTCCAATAATC 92929 28 100.0 32 ............................ GATACCCGCAAGCGCGGGAACGCTTTGATATT 92989 28 100.0 32 ............................ CGTCATGACTGCATTACCGACGCCGAAAACTT 93049 28 100.0 32 ............................ GATATAGCGTGAGGCGGGTCGGAATATTTAAC 93109 28 100.0 34 ............................ ACATTGCAATTAACTGATATCGCACCATCATCGG 93171 28 100.0 32 ............................ TACATACTCAAACGATTACTGAATCACAAAAC 93231 28 100.0 32 ............................ TGGTCGGCATACACGTTGACGCGGTTGCGGTT 93291 28 100.0 32 ............................ CCGGTAACTGCGTATCACGCAACCGAGGCCAA 93351 28 100.0 32 ............................ CTGAACGTTGAAGAGTGCGACCGTCTCTCCTT 93411 28 85.7 0 ....................A...C.CT | T,C [93431,93435] ========== ====== ====== ====== ============================ ================================== ================== 33 28 99.5 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : AAATTCATCGTCGAGTTGCAGGTTCAGCTGGATCAGAAAGGTGTTTCTCTGGAAGTGAGCCAGGAAGCGCGTAACTGGCTGGCCGAGAAAGGTTACGACCGGGCAATGGGCGCTCGTCCGATGGCGCGTGTCATCCAGGACAACCTGAAAAAACCGCTCGCCAACGAACTGCTGTTTGGTTCGCTGGTGGACGGCGGTCAGGTCACCGTCGCGCTGGATAAAGAGAAAAATGAGCTGACTTACGGATTCCAGAGTGCACAAAAGCACAAGGCGGAAGCAGCGCATTAATCTGATTGTCTGGTAGGTTGGTTAAGTCCGTGATCTCGTCAGGGGTTACGGACTTTTTATTTATGGGGGGAGGAGGTTCAGACCCTTTTTTTAATGATGATGCTAAGTTATTGATAATTAGTGCTGCGGGTAGGTAAGGATAAAAAAGGGTGGCAGCAGGAGATTGAGATGGTTTTGCTTTATTAACAACGGGCTAAACGTGTAGTATTTGA # Right flank : TACGATAGTGTTAGACGTTTGGTCGTGCAATGACACTCTCAACTTCAAACCATTAGCGTTAGCACGCAATAACAATCGTAATAATTGCGATGGAAATCAATTTTCAGCACATAAATCAATGCTGTACTAAGCCCAATACCTTCAAATATAAAATAATCACAGGATGTGTTTATGTCTTCGAATTACCTTACGCCTTCCGATCTCAAAACCATTCTCCACTCCAAACGCGCCAATATTTATTATCTGGAAAAATGCCGGGTACAGGTGAATGGTGGGCGGGTGGAGTATGTTACCAGCGAAGGTAAAGAGTCGTACTACTGGAATATCCCCATTGCGAATACCACGGCGTTGATGCTGGGAATGGGAACTTCCGTTACCCAGGCGGCGATGCGTGAATTTGCTCATGCCGGGGTGATGGTAGGCTTTTGTGGTACGGATGGCACGCCGCTGTATTCAGCAAATGAAGTGGATGTTGATGTCTCCTGGCTCAGCCCACAAAG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //