Array 1 41163-41316 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE384150.1 Clostridium cadaveris AGR2141 G605DRAFT_scaffold00012.12, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ========================================= ================== 41163 24 100.0 41 ........................ CAGTCCAAAATCGAAGAGCACGGTGGTGGAATAAACTTCAC 41228 24 100.0 41 ........................ TTAAACACTTTAGATACAGATGCCATTAATGGATTCTTCAC 41293 24 95.8 0 .......................N | ========== ====== ====== ====== ======================== ========================================= ================== 3 24 98.6 42 ATTCCTTATAGTTAAGATAAAACT # Left flank : TATAACTTTGAACTTGTGGATATGTTTTAGTTTCTATAACTTCCTGCTTTAAATCTTTAGCATAAGTTACATTTCCAAATGTTGATAAAATCATTGCTGCTGATAAAACACTAGCTACAATTCTTTTCATAATTTATATTCACCCCCGAAAATTTCTAACTCTGATTCTTATAATTTTACAGAGTTTTTCTTCATTGATTAATGTTAAAAATCCATCCCCTTTCAAATTATATAATTACCAACTTTTAATTTATTTAATTTTGGTTAGTATAGTAAAATATATTAACCACAAAAAAAAGCATGAGCAACCTATCTATTAAATAAGTTATCTCATGCCCTTTGTGGTTACACGACAATATTAATTATATAAATAATAGCATAAAAAATTTTTTATGTAAATACTTTGAAAAGATTAGTTTAATTTAATATTTTAAATATATCACGCAATTTATGTTAAAATGTTGGGATTTTCTGTGCCTATAATATTATGTTAACATATA # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 5.60 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCCTTATAGTTAAGATAAAACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.17%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 2 42987-43539 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE384150.1 Clostridium cadaveris AGR2141 G605DRAFT_scaffold00012.12, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 42987 29 100.0 37 ............................. GTGGGAGCAATCCACATGGTACTACTAAGGCAGATTT 43053 29 100.0 36 ............................. TTATATTAGTATGTGGCGTAATAGATGTAATATACC 43118 29 100.0 36 ............................. TAGAGTTTTAATAATAATACAAGAAGATACAGAAGA 43183 29 100.0 36 ............................. TCCTCGTCCAAGTGTCCAAATTTATGAATTCTTACT 43248 29 100.0 37 ............................. TCTTTTCTCCTATATACGCGTAAACTACTAAATAGTA 43314 29 100.0 37 ............................. CCTATCGTGACCCTGTTTTTATATAAGTATATAAATT 43380 29 100.0 37 ............................. AAGCTCTGTGTCATTATCCTCACCAATAAACTGATTA 43446 29 100.0 36 ............................. TCTTGAAGTGTATTTGATTCATCCATAGCATTCTCT 43511 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ===================================== ================== 9 29 100.0 37 CTTCACATTCCTTATAGTTAAGATAAAAC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAAA # Right flank : CCCCAAAATTAATTATAGTCTAAAGCAAGCTATAAAGCCACTTTAACCATCATTAATTTTTTAAATTTTAGGACTTTTTGCAGTAGATCTTCAATATAGTATTTACTATCTCACATTTATTGGTGCGTAAGTCTTTAGTTATAAGCATCCATAGCTTTTTTTATGTAAACTTGATTTACTGCGTTATATAAAAAGATCATCATAGCTTTTTTCTTGACCTACAACTTCTTTTCTAACATTATTATTATTTTTTACTATATAAATGTATAAGGAATCTTCTTCTTTAACAAGATTTTTATTAACCTCTGCTAAGCATTTATTAAGCTTTCCCTCAGTGATTTCTCCTTCAAAAACTGAATTTTGGGTCCAAGTTAAATATTTCTTAAGGCACTTCCTAACTCTATTTACTCGCTTTTCTCCTACATCATATGTTAAAATAACAAACATACTACCACCAAGCCTTTAATGGCTTATATTCTTCATTCTCTACAGCCATTTTA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACATTCCTTATAGTTAAGATAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.41%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [6.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA //