Array 1 109118-109451 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABWRM010000014.1 Pseudomonas sp. RW3S2 contig14, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 109118 27 85.7 32 T.........-.AC.............. TTGACGGAAGCGACAGCCGCCGCCGTGCCCTT TG,G,C [109121,109124,109135] 109181 28 100.0 33 ............................ ATGTAGGCTAGGGCGATCATAGAAGGTGTCCTC 109242 28 100.0 32 ............................ CACGACACGGGCGCCGCCGGTGCCGACAAGCT 109302 28 96.4 34 ............T............... CACACGGGCATGAGCCAGAGCGCGCTCTATCAAG 109364 28 100.0 32 ............................ AGTTCGGTCGCCCGATCCATCCAATGAATCAC 109424 28 89.3 0 ............C........C..C... | ========== ====== ====== ====== ============================ ================================== ================== 6 28 95.2 33 GTTCACTGCCGTGTAGGCAGCTCAGAAA # Left flank : ATTCCGCAAGGCCAGCCATTGATTGCATGGACCTTCGGGCTTGTGGGCATTCATGTGCTGCTGGGGTTGATCTGGGCGGTGGGGTTGATCAGTGCGACACAATCCTTTGCAGGCATCCTGCGCAAAGGAAACCTCATCAAATGGATGGATCGAGTAACAGGTATGGTCTTTGTACTGTTCGCTGCACGTTTGGCACTGAGCCGACGTTAAAGGCTGCGATACGACTCCTTGCAGCCACGGGCTTGTCGAAACGCCGCGAGCACGGTGTAGTTCGTGCCATCCTCGGCGAGTAACCAGAAGTAGTTTCGCTACGACTATTTTGTTGAGCTGCCTACGCGGCAGTGAACTACGGCCTCGGCCCAGTGCGGGGCTGGGCTTGTTTCTGAGCTGCCTGCACGGCAGTGAACAGACAACCGCCGCCTGGCGGTATTTTTTTGCCTTTCCTGAACTGCCTACGCGGCAGTGAACGGACAGTTGCAGGGATTCACCTGTTGGGCGTC # Right flank : ACAGTTTCCGAGTTGGCACGTAAATCACTAAAGGGTTTACCCGCGAAGCCACTGACTGTCTGGGTGGCATCGGCATTGCCAGTGTTCGTCGCGGTTCGCCGCCCCGATATGCCCACTACGACCAGGGCGAGATGAGAAGAGGGCGATTTCCGCTGACGCTTACCGCTTTCAGGCCCTGAATCCCGGCCACAAAAAAACCGACCATAAGGTCGGTTTTTTCTGGATCTTGGTGCCCCGAGGGAGACTCGAACTCCCACTCCTTTCGAAAACGGATTTTGAATCCGCCGCGTCTACCAATTCCGCCATCAGGGCTTGTGGCGCCGCAGTATAGAGAGGCTCCTGCAGTCGGTCAATCGGCTTTCATGGTCAATTTTCATGCATTGGGCTAAACTTCCCGGCCCTGCCAAGCCGAACACGATCATGCGCGTCGCCGATTTTTCCTTCGAACTCCCTGATTCCCTCATCGCCCGCCATCCCCTGGCCGAGCGCCATGGCAGCCG # Questionable array : NO Score: 5.91 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGTAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTGTAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0.27 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //