Array 1 610405-606701 **** Predicted by CRISPRDetect 2.4 *** >NZ_BPTY01000002.1 Prevotella sp. R5052 sequence02, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 610404 36 100.0 30 .................................... TGACCGACAGAGTTCAAGAATGGGCCATAT 610338 36 100.0 29 .................................... ATATAGTGAAAATATAGAAACAAATAGTG 610273 36 100.0 29 .................................... GAGTATATGCAACTAACTCAACATTAAGA 610208 36 100.0 29 .................................... TGGACGAGGTCGTCACGTACTCCAGTTGC 610143 36 100.0 30 .................................... CTGTAGTCATCGAGACATAAGAACCTTCAG 610077 36 100.0 29 .................................... AAGATTTGTTAACAAATCCAGTCCGTAGT 610012 36 100.0 29 .................................... CGCAGGATGCTCATATAGCTCAGACCTGG 609947 36 100.0 29 .................................... GACAAACTCAAAGATGATGGTGCGCTATG 609882 36 100.0 30 .................................... GCTGCCATCGTGAACTCGATGCCCTCCAAA 609816 36 100.0 29 .................................... GCAAGAGAGCCGAAGAAATCAACAGGCAG 609751 36 100.0 30 .................................... GACAAAGCGCATTTCTATACTCAGAAGAAA 609685 36 100.0 30 .................................... TGAACGATGTCTCTTGCGAGCCGTTCCTGA 609619 36 100.0 30 .................................... ACTATCTTCGATGCTTTCACTTGGCTCTTA 609553 36 100.0 30 .................................... TCATGGACGGTGAGGTAAAGCACGACCATG 609487 36 100.0 29 .................................... TATACAGCCACAGCAAGCGGCACCATCGC 609422 36 100.0 30 .................................... GCAAGCATCACGGTATCATCGCAATACCTG 609356 36 100.0 29 .................................... CCAGCGGTTTTATACTAAATACAGTAAAC 609291 36 100.0 30 .................................... GGTTATCTCAAACTCAACACAGCCAGCACG 609225 36 100.0 29 .................................... AATCTGAATTTCGCGTCGTTCGAGAAACG 609160 36 100.0 30 .................................... GGGATATATCACCAAGATAGAGACATTCAA 609094 36 100.0 29 .................................... AGGCTTCGAGAATGGTCTCTATGCTCGTG 609029 36 100.0 29 .................................... TCCATCGCAATACATAGCATCATAACCGA 608964 36 100.0 29 .................................... GCTTGCTCTTGCGTGTGTCATGCCATGCA 608899 36 100.0 30 .................................... TGATAAAACGCTTTTTGAACAAGGAAAGGT 608833 36 100.0 30 .................................... CACACACCGAAGATGCAAAGTACCTCCGTC 608767 36 100.0 30 .................................... GAGAACGACTGGCAGCGGCTCGCACAGTTC 608701 36 100.0 29 .................................... TAACTACTATGATAGTGGCAACCTCATGC 608636 36 100.0 29 .................................... CGTCCGCAACCATCCCAAAAACTATTCGG 608571 36 100.0 29 .................................... TGGCCTTCGAGGCCTTCTCGGCCTGTGCG 608506 36 100.0 29 .................................... CTTCGATTTCTCGTTGTTCAGATTGTACT 608441 36 100.0 30 .................................... CCAACGTGGTAACCCTGACCTATTAGGATG 608375 36 100.0 30 .................................... CAAGAGCACGAACGTCTGAAATGGTCGACA 608309 36 100.0 30 .................................... TTTTCGTTCAATGCTACTTTGAACAAGTCG 608243 36 100.0 29 .................................... GTGGCAGTGCTAACATTCCTAAAGTATTA 608178 36 100.0 30 .................................... CGTAATAAGGGAAACGAGGAGTGCAAAATG 608112 36 100.0 29 .................................... CTGGAGGCTATCTATAAGAGCGCCGACCC 608047 36 100.0 30 .................................... CGTGATGAATTTACTTACAACGGGGTTTGG 607981 36 100.0 30 .................................... GTTTGCCAAGCTATTAGGCGTCAGTCCTCA 607915 36 100.0 30 .................................... TTTGGACTCTCTTTGCAATTCCCTAATATG 607849 36 100.0 29 .................................... TCGATACTGAATCGACTACGACTCGCAAA 607784 36 100.0 30 .................................... GGGCAGCGTCGACGTTGATGCTGTATGTGA 607718 36 100.0 29 .................................... TTTATGTTTAATTCTTCTATTGATAGATA 607653 36 100.0 30 .................................... TTTAATTTAAAAATAAAGAGCATAAATTGT 607587 36 100.0 29 .................................... CCGCAATGAGGTCACCGGCAAAAAAACGA 607522 36 100.0 29 .................................... GCTTTCCAGATGAAGAGTAACGGCAGTAG 607457 36 100.0 29 .................................... ACTAATTGTTATATGCTTGCAAGTATCAA 607392 36 100.0 30 .................................... AGTGTTCAGCACCATTGCGGTCACATCCTT 607326 36 100.0 29 .................................... CAGAAATTCTTTCATTGCCGTTTGATTTA 607261 36 100.0 30 .................................... GCGGCAGCCTTTCGGGGTTGGGCAGGGCGA 607195 36 100.0 30 .................................... GCAGCGTCTTGTCCACCGCTCCATTGATAT 607129 36 100.0 29 .................................... ATATTTATTGTGACCCGCATGGGGTAATG 607064 36 100.0 30 .................................... TAGAAGGGGCGCAATATCTCCTTATCGCTG 606998 36 100.0 29 .................................... TCGTAATGATACGAATGAACTACACCGAC 606933 36 100.0 30 .................................... CAAGATGCCAAAGGCCCGACAATTCAAGCA 606867 36 100.0 30 .................................... GATGGCATGCCGGGTCATCCACGCATCCAT 606801 36 100.0 29 .................................... TCGCCGATAACGCCTATGCGCTGCTGTTC 606736 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 57 36 100.0 30 GTTGCGGTTTGATGTAGGAATAGAACGATATACAAC # Left flank : AAATTCTATAAAGGTGAAACAAAAAAGCTTTCCTTGCCAGTTCTTATATGACTTTTAACCGACTTAATGCATATCATATCATGTGGCTGTTCGTATTCTTCGACTTGCCTGTGACTACAAAGAAAGAACGCCACGACGCAGCACTCTTCCGTAAGAACCTGGAGAAAGATGGCTTCTCCATGATGCAATTTTCTGTTTATATCAGGCATTGCGGTTCCTATGAGAGTATGGATGTTCACGTCAAAAGGGTAAAAAGCCTTATACCAAAATATGGGGCCGTAAGTATTCTCTCGGTTACAGACAAGCAATACAGTAATATATATAACTTCCGTGGAGTACCTAAAAATCAGAAACTAAAAAAAGAAATAAAACATATCAGCGAACCGATACAATTAGAACTTTTTTAGTATCTTTGCACTGGAAATAGACCTACACTTCCGTTTTTTTTATCTCTCCAATGGCCTTGAATCTCTTTATTTAAGGGCAATTTAGAGAATAAG # Right flank : TCTGCACTGCCCAGTCACTCTATGAGCGAGTTGCGGTTTGATTAAAGAAACCTCCATTTGAGACACTATACAATTTGGCCCTTGCTTTGCCGTTTCTGGCTTAGCAAGGGCTTTCTTTCGTAGAAAGCCCGTTTAAACTTCCCCTTGTTTTAGTCTCTGCATAATTATTTTTGCCAATATTATTGGTAATTTCTTGCAGATATGGCCATTTATTTGTACCTTTGTATAGTTCTTTTAATTATATAGATACTATACATATTTATGGCTATTCCAGAAGAGATAAAGTCAGTCGCCCGCCCCAAAAGTACGATAGTCCGACAGAGAGGCAGTCGTTTTGTCGTCATAAAAAGGACGAGCAAAAGAATTAACGGGAAACCTGTCCCCGTAGACATAGGAACGGTAGGAGAAATTGTAAACGGAAAGTTTGTCGAGGGCTCGTATATGCGCAAGAAAAATCGAGTGGATATAAAAGATTATGGAGAGGTGGCTCTCTGTGACAA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCGGTTTGATGTAGGAATAGAACGATATACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [53.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA // Array 2 642534-646323 **** Predicted by CRISPRDetect 2.4 *** >NZ_BPTY01000002.1 Prevotella sp. R5052 sequence02, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 642534 32 100.0 34 ................................ TGTCATGAATACCTTTTCGCCACGTTTCAATCGG 642600 32 100.0 33 ................................ ATTTATGTCAAAAAACAACATCCCGCCTCTTTT 642665 32 100.0 32 ................................ TATCGGTCAGCCCTCTGTTGGTTCATATCAAT 642729 32 100.0 35 ................................ CGACTATTTCAATCCGTTATATCAGCGACTTGGAC 642796 32 100.0 34 ................................ GTATTCTCTTGATGACCTCGGCACGTCCGCACCT 642862 32 100.0 34 ................................ CGGGACACCTATCATATTAATGTCGACGCAGCCC 642928 32 100.0 34 ................................ TTGATGATCTCGGAGGTAACGCACTTGTCGGTGC 642994 32 100.0 32 ................................ TGCTGCCGTTGCATCATATGTTAGTAGCTACG 643058 32 100.0 34 ................................ CTTTTTGACGACCCGAACCTTTGTACGTCATTGT 643124 32 100.0 34 ................................ CGAAGAACCCTGCTACTGGTGTTCGTGATGACCT 643190 32 100.0 34 ................................ ATGATACGTATCACGTTAATGTCGATGCAGCCCA 643256 32 100.0 35 ................................ TTCACCGTGGCTTATGTAAGTCCGTTGAAAGTGGT 643323 32 100.0 34 ................................ CTATGTAGCTGTGATAGTCCTGACTCTGTGTCTA 643389 32 100.0 34 ................................ TAATCACTGGTTGCCTACCGTTCATACTTTCAAA 643455 32 100.0 34 ................................ TCCCCGTCCGTTTTATCGGGCTTATGGGCGTGGT 643521 32 100.0 34 ................................ CTCCTGCGTCAAGAAGGCATTATCCCGGTGGTCC 643587 32 100.0 35 ................................ CAACAGTGAAGTGAGTAATCTAATAGGCACGAATG 643654 32 100.0 34 ................................ AACATTTCCACCTCTGCCAGTCCACTGGCTTCAC 643720 32 100.0 33 ................................ ACGCTGTCAAAGAGATTATTAATACGTTTCACA 643785 32 100.0 34 ................................ AGCGAAGCAGGACATATTACAAGCACTGGCCACG 643851 32 100.0 35 ................................ TTAGCCAGTTCGAAGCAGGCATTGCGTGCGTAGAT 643918 32 100.0 35 ................................ AGGATAACGGATATTGTCGATTAAGTGAGTATAAT 643985 32 100.0 34 ................................ ACTACGTGCTGTCGATGCAATTTGTTGAGCGCAT 644051 32 100.0 33 ................................ AAGGGAACAGAAAAGACCGTTGCCGACTTGTCC 644116 32 100.0 35 ................................ AGTCCACACCTATTTTGTCACATAGACCCCCCAAA 644183 32 100.0 34 ................................ TACGCTGCGCTGCGCTTGCGTCCTCAGCCACTAA 644249 32 100.0 35 ................................ TTTGCTAAATAGTTTTGGTATATACTTAAATTATA 644316 32 100.0 34 ................................ AATTCGAATTTAAGATTGTTCTCAGCCATAAAGT 644382 32 100.0 34 ................................ CTCTATCAGCGGCTCCATACGTCCCGCCGCCCAG 644448 32 100.0 34 ................................ TTTGAATGGGCGTGTCACTGGGCTGTGCACTGTG 644514 32 100.0 33 ................................ TGACAGAGCTGCAGAGGCCATCGAGAATCACAT 644579 32 100.0 34 ................................ ACTCCTTGCTGGTCTTGATACTCTCCATAATGGA 644645 32 100.0 34 ................................ CTGTGTGCTCTGTCCTCTGCCTGGCAACAATCAG 644711 32 100.0 34 ................................ TTCCTGGGCCTCGGCTATTTCCTGCTTCTTCACA 644777 32 100.0 35 ................................ CGGATAATTGGGATAGCCGTAGCCAACACCCCAAC 644844 32 100.0 34 ................................ CGCATCCGGCTGGAGGCTATCGAACTCTACGAAT 644910 32 100.0 34 ................................ AGTAGCTCAACTGGATAGAGCAACTGCCTTCTAA 644976 32 100.0 34 ................................ CTGAAAGAGTTGCGACCGAGGATGGAGAGATGGC 645042 32 100.0 34 ................................ ACAAAGGAACGTAGTTTAACGAAGAAAGACTGCG 645108 32 100.0 34 ................................ ATTAATACGTATAATTATGATTACAACTAATGAC 645174 32 100.0 34 ................................ AACTTAGAGCTGTCTACGCTTGTGCGTGTAGTCG 645240 32 100.0 34 ................................ CTTAATATGGCTTGATTTGTTAGCACCTCCGCAG 645306 32 100.0 32 ................................ AATTATCTAAAGATTATGCGCCGACATGCTGA 645370 32 100.0 33 ................................ TTAAACTCACGTCTCCAGTTCTCTTTCAGCGAA 645435 32 100.0 33 ................................ CCTTTAGTATGCGTAGTAAGTAACCTTGATACC 645500 32 100.0 33 ................................ TTTGAATGGGCGTGTCACTGGGCTGTGCACTGT 645565 32 100.0 35 ................................ TTTTCCTCTGCGTCTATATAAGACTGCATCGTATC 645632 32 100.0 34 ................................ CTGAAAGAGTTGCGACCGAGGATGGAGAGATGGC 645698 32 100.0 33 ................................ ATAAAGGAACGCTACACAGGCAAGGACAAGGAC 645763 32 100.0 33 ................................ ATGTCAGACATGCAGCAGACATAACGAGAGGGG 645828 32 100.0 33 ................................ TTGTTTCTCCGTTAATTACGACGGTTCACTTCT 645893 32 100.0 34 ................................ CGCCATAGGAACTTGACTTAATTTTTTGGAAAGA 645959 32 100.0 36 ................................ AAAAGGTCAAGACCATAGTTACGATACCGAGGTTGT 646027 32 100.0 32 ................................ TGTACTGAATCTTCTAATTGGTCACAAGTGGC 646091 32 96.9 36 ........T....................... TGCGTCAACTAAGATTCTCTACCCCCGAGCGGAGAC 646159 32 100.0 34 ................................ AAATCACGGAACGCACCCACCTTTAGGTTTGGCA 646225 32 100.0 35 ................................ CTCGACCTTCCTGTGTGTTTCCTTTGGCTCGTACA 646292 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 58 32 99.9 34 GTCGCGCCCCACGTGGGCGCGTGGATTGAAAC # Left flank : ATATGTTCGTACTGGTTACTTATGATGTGAATATCACATCGCCTTTAGGACAAAACCGACTCAGACAGGTTGCTAAAACATGTCTTAACTACGGAAAGCGCGTTCAAAATTCTGTATTCGAATGCGTCCTGACTGAAGCTCAATTTGTACTGCTAAAGGATAAGCTGTCTGAAATAATAAGTCAATCGGATGACAGCATTTGTTTCTATAAATTAGGTAACAATTGGAAAAGACATGTAGAAAGAATCGGCAAGGACACGTCAGTCGATGTGACTGACGTCTTAATATTATAATGCACTTCACCCATACTTACTCTCAGAATGATTTCGTTTATGCGAACCCTAACCGTTGCACTAAAAGCAGGAATTTTCGCAGAGACTAATACACAGGCAGTTAAGCTTTTTGAAAGGACAATATGCATTTAAATAGCTATGCTTTTCGCCATGTTCGCAAAATATAGTAACTTTGCCTCTGATTATTAGGCAATTGTCTAATAAGCG # Right flank : CAGCCCCTCTATATGTATGAACTTAACCCAACTTTGACATCGTATTTTGCTTAGTTGTTCTGTATCAGCAATTTAGTGTTTTTAAAAAGTCCTACTGTGTTCTACAGATTTTTATTTTTTTAAATGGCACTTTACTGATTTTCAACAACTCGTAGATTTCAGCTGCACTATCTGTAGGCACACTGCACAGTCTGGTCTCGACAGCCTCTCCAAGCGCATTTACTGCTGTGGTAGTAACTGCTTTTTGAGTCTTCATGATCCGCATGATCTCCGACCAGTACGGTGTCGAACGCTCCCGCCCATGCTCATCCTTGCCTTGCTTTCGCCGGGCAACCTTCATCTGATGGCGCACGGTGTTTACTATCCAGTAAGCCAGCAGCCCTAAGAAAAGGTGTGCGTCTGCCCTATTGTCAGTCTGGTGGTATATGGGCCTGAGGCTGAGGTCGGTTTTGAGCTGCCGGTTGGAGCATTCTATTTCACGTATAAGATTATAGTAGTTC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCACGTGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGCCCCGCGTGGGCGCGTGGGTTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.70,-7.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 648460-650266 **** Predicted by CRISPRDetect 2.4 *** >NZ_BPTY01000002.1 Prevotella sp. R5052 sequence02, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 648460 32 100.0 33 ................................ ACGTTGGTAATTTCGTTGACGATACCGTTGGAT 648525 32 100.0 34 ................................ CGTGATACCTATCATATCAATGTCGACGCAGCTC 648591 32 100.0 35 ................................ CCTTAATTTAACGTTATGAAACAGATTGATTATAA 648658 32 100.0 35 ................................ TACAGTTGCTAATTCTATATTCGCAGGTCTGCAGA 648725 32 100.0 34 ................................ TTGCAAACAATCATCTCGCAACCGTACATCCTCC 648791 32 100.0 33 ................................ CTCAGTCTTTAAGATAGATTCTATTGAGCGAGT 648856 32 100.0 33 ................................ CGTGACTTTGTCTATGATTGCTGGTCGTTGCGA 648921 32 100.0 33 ................................ TCATTCCGCAATGTCGACTTTACCAATTTTACA 648986 32 100.0 33 ................................ ATAGTTCAGATGAACGACTATCGTTCATCGCTA 649051 32 100.0 35 ................................ TCAATTCTATCGGTCAGCCAAGTGTTGGTACTTAT 649118 32 100.0 33 ................................ CGACTATTTTAACCCGCTCTATCAGCGACTCGG 649183 32 100.0 33 ................................ TCAATCTCACTCTGGTTATCGTTCTACCCCCCT 649248 32 100.0 35 ................................ TTTACCTGATTATGCTGTAAACCTTTTTCGGCTTG 649315 32 100.0 34 ................................ AGACTCGAGAAGAAATCAAGAACGTTGCTGAAGA 649381 32 100.0 35 ................................ TAATCTTCCTTACATACTTACGCTCCGTCCGTGGC 649448 32 100.0 35 ................................ AGATTCCAAAGGCGCATTTGTTTCTTCTGCCTTTC 649515 32 100.0 33 ................................ GTACTAAACGAGATGATTTTAGCGTTCGTGTAT 649580 32 100.0 33 ................................ TGCAGTCTTGTGGAAAGTATCGCCATAATGACC 649645 32 100.0 32 ................................ AATCTTCGCAGGACTGCAGACACGAGAGCAAA 649709 32 100.0 33 ................................ CCTGTCCTTTAACGACAACAAAAAGCGGTGCAA 649774 32 100.0 36 ................................ AGACCTCAATAATGTTTGCATTATGACGCAGTGGCC 649842 32 100.0 34 ................................ TGCAAAGCGAGCGTCAGGATTTCGGAACTTACGA 649908 32 100.0 34 ................................ TACCATCAACAACAGCTATTTTGTGAATCATAAA 649974 32 100.0 33 ................................ AACCGTCTCAAAGCATCCACAAATCTCCCTACG 650039 32 100.0 32 ................................ ATTTTTCAGACAAAAGTGCCTACCTTTGCAGC 650103 32 100.0 33 ................................ TTGTCCGAGTCGCTAAATTGTCCGGGCTTGCCA 650168 32 100.0 35 ................................ TTTTCCGCAAAGATAGTCTATATCATGTGTTGTGA 650235 32 93.8 0 ....................A........G.. | ========== ====== ====== ====== ================================ ==================================== ================== 28 32 99.8 34 GTCGCGCCCCACGTGGGCGCGTGGATTGAAAC # Left flank : ACATCTATCCGTTTCCTGGCCTTGGACTTGCTTCTCTCGTAGGCGTTGCCCACAATATCAAGTTTTTCCTCCTCGACAAGTCTGGCCCAGTACGCATGCACTCTGTCACGAACCACTTCCGAGTAACCTTGCAGTTTCTCATCCCAAAGTTGGACATCCTTCTGGTGATTGTACAGATACGTCAGTCCACGCGCAACATCTCTTATCTGCTCTGGGGATAGGTCATGTATAAACCCGACATTGAGCAATATCAAAGTACATACCCTACCGCTGGCATCGCGATAGGACTCCTTCAGACGGTAATACTTCTCGTCTTTACACGTCTGTGGGTTGTAACGTATTTGGGACGTAAAATTCATGCCGCAAAGATAAGCAATCCCTACGACATTGCTGTGTTCTACATTGCGATTTTGAGCAGTTTGACCACGCAAACCCCTATAAACACTGGAAAAAATTCTGAAAAAAAACATTAGAGCGTCAAACTTGGGTTAACACTAATT # Right flank : CCACCTACACTCAGATTCTTGAAAGATAGAAGATTTTGTATGTGCGTGCAGAATACTATAGGAATCCCTCGCACAAGCCTCAAGGCTGCAAGGAACAGGCAAATCCTTTGCGGAATCTTTGCGACCTTTGCGACTTGGCGAGATTTTTTCGGAGCAAGAGGATGGGGATATAACAAATCTTTGCAACCTTTGCGACTTGGCGAGGGTTATTCGTGGTAAGGGGATGGGGATAGAACAAATCTTTTACGGCCTTTGCGACTTGGCGAGGGTTATTCGTGGTAAGGGGATGGGGATAGAACAAATCTTTTACGGCCTTTGCGACTTGGCGGGATTTTTCGTGGTAAGGGAATGGGGATAGAACGAATCTTTGCGACCTCTGCGACTTGGCGGGATTTTTCGAGGCAAGGGGATGAGGATAGAACAAATCTTAGCGAGCGTGGAGCTTGGCGAGGGGGCTTTCGTGGCTGGAGGACGGTGATAGACGCAGTGAAAGGGTATTA # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCACGTGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGCCCCGCGTGGGCGCGTGGGTTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.70,-7.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //