Array 1 18105-21556 **** Predicted by CRISPRDetect 2.4 *** >NZ_OVCN01000021.1 Acinetobacter haemolyticus strain KCRI-348C isolate R0006_348C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 18105 30 90.0 30 ...........................TAA ATACATTGCATAAGTTTTTGAAAATAGAAT 18165 30 96.7 30 ...........................T.. TAACGACACTCAGACCAAGTTGCAAAAGGT 18225 30 93.3 30 ...........................TA. AACATTCAATCAAAGTGGGTTGTATAAACA 18285 30 93.3 30 ...........................TA. TTTGTATAAATAATTCTAAAATCAAAATTG 18345 30 90.0 30 ...........................TAA ACCTTAACCATAAACCATTAACCAATAACC 18405 30 93.3 31 ...........................TC. GTTGCGCGTTCTGCTAAGTCAAAAACGAAAG 18466 30 90.0 30 ...........................TAA TAATTGATATCTCAATTTGTGTAGAGTTAT 18526 30 90.0 30 ...........................TAG TAAGTGCTGCTATTTTTATCGATTATCAGG 18586 30 96.7 30 ...........................T.. GTTAACAGATGAGTTAAATACTCCTTTTTT 18646 30 93.3 30 ...........................TA. AAAGGATAAGACCTAAATTGTCTTGAAGAT 18706 30 96.7 29 ...........................T.. CAGTCTTTTCTAGCATCTTGTCGAACCAT 18765 30 96.7 30 .............................A AATCATCGTTTTCACCGTTATCATAAGGCA 18825 30 100.0 30 .............................. CTAAAAGAACACACATTGGTTTTAATTAAA 18885 30 96.7 30 .............................G GAGCTTTAGCACTTAAATTCGCCATTGAAA 18945 30 96.7 30 .............................G AACGTAGAGCCTGATCATATGCCATTGTAG 19005 30 96.7 30 .............................G AAGTTGTTGAAAATCTAGTTTGGTTAGTGG 19065 30 100.0 30 .............................. GTAACAATTTAAGCGGTGAAGCTTTAATCT 19125 30 96.7 30 .............................A GTAATTCAGAAACCATCGCAGGCACAGATA 19185 30 100.0 30 .............................. GGCTTGTAGGTTATTTAAAAGAGAACTGGT 19245 30 96.7 30 .............................G CAAGACACACCAGAACTGCGCAAACTTTAT 19305 30 93.3 30 ............................CA GCACATCACGGGAAAAAGCCTGCGTGATGT 19365 30 100.0 30 .............................. ATCAAGCGGTTGACGTAGAAACATCATCGC 19425 30 100.0 31 .............................. GATTGCGCGCAGCTTCAGGCACAACGATTTT 19486 30 96.7 30 .............................A CACGTGATTTGCTGTTTTTAACTCGCAATA 19546 30 93.3 30 ............................AC CTTCAACCGCTTTAAGTCTATATACGCCTC 19606 30 93.3 30 ............................AG TTTTATTATTTATGACTGGAACAATCCAAA 19666 30 100.0 30 .............................. ATGTCTTTTGGTTTGGTTGTTAGCTTCAGC 19726 30 96.7 30 ............................A. TTGGTCTAGTCCACGATCGAAACGTTGAGA 19786 30 100.0 30 .............................. GAGCGCTTGCTCTAACCTTGCTACACACTC 19846 30 96.7 30 .............................C ATTAACTGATTGAGCACGGAAACCCACGTT 19906 30 100.0 30 .............................. ATTTGAATATTTTAGGGATTACTGATACCA 19966 30 96.7 30 ............................G. GGACGTATGGTAGGGCTGCTTTCGCTGCGT 20026 30 93.3 30 ............................AA TGGCATTAACCGAGAAAATGAAAAAGTATG 20086 30 100.0 30 .............................. GATTAATAAGTTGCTTTTGCAGCTCATCCA 20146 30 93.3 31 ............................CA AATTGAATACTTGAAATTGACGACTTTCAGA 20207 30 93.3 30 ............................GA TTAGCGAATGAATCTGATATGGCGCAATTC 20267 30 96.7 30 ............................A. TATTTGCTTTAAGCCAAGCTTCAGATAATG 20327 30 96.7 30 .............................A ATACATAAAGATTTTCATGCATCCCGTTTA 20387 30 93.3 30 ............................AA AAGCTTGAAGAGCGATCTCCATACATCACC 20447 30 96.7 30 ............................G. CGACCGTGGCATCACTAAAAACTATGTCAC 20507 30 100.0 30 .............................. GGCGATTGCGTTGTCATCCAGATAATTGAT 20567 30 93.3 30 ............................AA TTGCCGTCAATGGCGCTTCGGCGCTGTATG 20627 30 100.0 30 .............................. GTGATGTTTACACGCACAGGGAATATTGTT 20687 30 93.3 30 ............................AA TCTTCTCGTCAAGAGATGGGATTCCAAACC 20747 30 93.3 30 ............................AC TCAAGGTATTGGCAGGCTGTGAGGGTTATA 20807 30 93.3 30 ............................GC AACCGTTAAGGGTGACGTCGCCTTCACAGG 20867 30 93.3 30 ............................AG ACGGTCAACCTGCATGTCGATACCGCACGT 20927 30 96.7 30 .............................A AGTAACTAACAACGCCAAGACCCAATCCTA 20987 30 93.3 30 .........A...................A TGAATGCATTACTAAAAAGCAAGATATGTA 21047 30 96.7 30 .............................G ACCATGCCAGTTTTGGTGTGATAAAAAAAC 21107 30 100.0 30 .............................. ACCCATATCACCAGCAATCTTTTTGACTGT 21167 30 93.3 30 .............C..............A. AACGCCACGTCTGTGATGTTTACCAGCCAA 21227 30 93.3 30 ........T....C................ GCAGATCCACTTCAATGGACTGCATGACAA 21287 30 93.3 30 .............C...............G AACACGATGCAACGTGGCTTAAAAACTTAA 21347 30 90.0 30 .............C..............GA AATCGTACCTGATTATGCAGGTGATCTGTT 21407 30 96.7 30 .............................G CTCGATCCAATCTGTGCCATAGACATTGTG 21467 30 93.3 30 .............C..............A. TGATGCAGATGATACGACAATGCAGGTGCA 21527 30 83.3 0 .....C.......C..........A.T.G. | ========== ====== ====== ====== ============================== =============================== ================== 58 30 95.3 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAATACCTCAAGCCAAGATTAATGGCTATGCACATTATTATCGAGTTAATCCAAAGATGAGTGTTGAGGAGCGTATAGTTCATCAAGCGCAACGTCGAAATATTTCTTTGGATGAGGCTAAGCAGCATTTTAAACAATATGTTGAGCAACCTATTGGTGAGCCTTATGTGAGTTTAAAAAGTCTGAGTGCAAAACGAGAGCAAAATATAGATAGACCCTATCGTTTGTATATTGGTAAATCTGTTGCTGATCAGGCAAAAGTTGGAATGTTTGGTACGTATGGGCTAAGTCGAATGGCAACAGTTCCAGAGTTTTAACCCAATATTTTTTCTACTCTTTAACAACTTAATAAAATCAATAAGTTACAACAAGTCGTTTTTTGATTGGGTAAAATGTCAAAATCCATGATAAATACTTGTTGTAACTTATATTTTTACTATGATTTTATA # Right flank : TATAAATGGCTATTCCTAATACATTCAGCCACTTTAATTTTTAAATAAGAAAATATACCCTGAACTTAATATATTTTTAGTGAATTTTTCATGCGCGGTCTTTATCTCATCACCAATGATGATCCCATCCAATTATTACTTCAAAAATTAGACGTTGCTTTAGCGACGGGAAAGGTTGCGATTTTGCAGTATCGACGGAAGAAAGTGCCAAAAAAAGATCAACCGATGGAAGTCGAACAGATCAAAACACTCTGTGAAAAGTTCCAAGTACCATTTGTGATTAATGATGATTTGGCTTTAGCTGAACAATTTGGTTTAGGTGTTCATTTGGGGCAGTCGGATGGAGAAATAAGCGATGCTGCTGCACGGTTACCGCAAGGTGTGATTATTGGACGTACATGCTTAAACTCATTAGAGTTGGCTGAAAAAGCAATTGCTGATGGGGCGACTTATGTGGCTTTTGGTGCTGTCTATGCCACCTCAACCAAACCAGAAGCAGG # Questionable array : NO Score: 5.27 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.25, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 49886-47758 **** Predicted by CRISPRDetect 2.4 *** >NZ_OVCN01000006.1 Acinetobacter haemolyticus strain KCRI-348C isolate R0006_348C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 49885 28 100.0 32 ............................ CGAATGTGTTGATGGCTTCGAAAAAGTTTATA 49825 28 100.0 32 ............................ ACTCGATGCACTGCTGTCCGATTAATTCCTTG 49765 28 100.0 32 ............................ ACACTGGTAATAATGGACACAAAGCAATGCAT 49705 28 100.0 32 ............................ AATTTTTAATTGCCAAAGCAATATTCATTATT 49645 28 100.0 32 ............................ CAGTGAAGAATTCTTTCCTGAAATTTCTTCAA 49585 28 100.0 32 ............................ ATGGCGAATTTGGCAACTTTGAATATCTCTAT 49525 28 100.0 32 ............................ TTTTTGAATGCTAGTAATAATTGATGCCCAAC 49465 28 100.0 32 ............................ TTAACGCGGTCCCAGTATTTGTAAATTGCAAT 49405 28 100.0 32 ............................ TAACACTGTCTGGATTGAAGCAGCGCGAGACG 49345 28 100.0 32 ............................ TTTGTACTGTTTAAGGGATTTCCAGACGGATT 49285 28 100.0 32 ............................ TTATACTCGCTAAGGACTTCGCCTTCTTCGCC 49225 28 100.0 32 ............................ AAAGCCCTCAAAAATTTTAACCACGTCATTTA 49165 28 100.0 32 ............................ ATAACAATACTAAAAAGCTTCTGCATCTGGAT 49105 28 100.0 32 ............................ TGCAGATTTAAATGCACAGCTTGAGGATAATC 49045 28 100.0 32 ............................ AACTCAGTTGCAACTTCATGATCTTGGCGCAT 48985 28 100.0 32 ............................ ATAAAAACCATTAATAAACAAATGCTTAGCAT 48925 28 100.0 32 ............................ GTTATTCCACATTTTTCTAATTCTTTCATATA 48865 28 100.0 32 ............................ TACTGCCTCTTCAAAAGCATTGTCGTATGCTT 48805 28 100.0 32 ............................ ACCATGTGGCCATCTTCATACCCATTGGTCTG 48745 28 100.0 32 ............................ ATGGAACATATTTACTAATATTGATGGCATCA 48685 28 100.0 32 ............................ ACTGATGACTACATGGTAGTTAGACGCTACGA 48625 28 100.0 32 ............................ ATTGATACGGAGCGTGATAAGATTAATATCGT 48565 28 100.0 32 ............................ AAGCATTGAGTGATATTGTTATACACCCAGCT 48505 28 100.0 32 ............................ TTGATTACTGTATGTCTTAATCAAATCTTCCA 48445 28 100.0 32 ............................ AATATTTATGTTTCGGATTTGGTTTCAGGCGA 48385 28 100.0 32 ............................ TATGGGTCAAGGCTAATTCTGAACTTTTTAAA 48325 28 100.0 32 ............................ AGCACCCAACAATAAACGTGCAACTAATGACG 48265 28 100.0 32 ............................ TTTTGATAACGCGCGGGGATCGGGCGTCGGAG 48205 28 100.0 32 ............................ TTCTTTGTATCTATAAATCGACTGAGCTTCAG 48145 28 100.0 32 ............................ TCGCAGGGCTTCAAATATGCTATGAGTTGCTT 48085 28 100.0 32 ............................ AGTAGACGAGATAGTGAAATTGCTGACTTATC 48025 28 100.0 32 ............................ ACAACTTGATCTCACTTAAATTGAATTATTGC 47965 28 100.0 32 ............................ AGGCCGAGGTGGACGGGCTGCAAAAGCGGGTG 47905 28 100.0 32 ............................ TTGTTGAGCAACGATCATCTCTCCAGTTTGAA 47845 28 96.4 32 ...........T................ ATAAATTAGACTCATAACAACTTGTAGAAAAT 47785 28 75.0 0 .......A.....C.....A...CC.TT | ========== ====== ====== ====== ============================ ================================ ================== 36 28 99.2 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : TGCGATTTGTCTTTGTAGATTACTTATCTCAATGGTATCGGCATCAACAATTGTTATTTTTCCTACACCTGCGCGAGCAAGTAACTCTGCGCTCGTACAACCGATCCCACCAGCACCAACAATCAGTACATTGGCCAATTTTAATTTTTCTTGTGCTTCAATATCCCAACCATCTAGTAAAATCTGACGGCTATATAAATGCATCTCGTCATCAGTTAATTCAAATGTATGCTCTAGATGATCAGACACGTTCCATTATCTCAAAATCGGCTTAGTGATTGCTGATTTTAAGTGGCTTATCTCATTTAGCAAAGCATTAAATGTTTGTTTGCTACGCCATTTATTTTTTGACAAATAAACTGTTTTACCCCAATATTTTTATTACTCTTTAACAGCTTAATAAAATCAATAAGTTATGAATTAGCATAAAAACTTTGGGTATTGAAGTGTTTTCCACCCCAAATCACTGTTTTTTGTTAATTTATTTATGTTATTTTATA # Right flank : ACGATTTCTTTCGATCATGCATCATTTCATAAGTTTGTGCTCGTAATAACTCCTCTTTGGATGTAAATGAATTATTTCTAAGCTGCTCAAGGGAGCGCTGTTTGCTCGCATCATCAACATTATTTTTTAAAATCTGATCACGTTGTGACAAATAATTATTTACCTGATTCTGCCAAACTGCTTCTTCTTGATCGACTTTCTCCAAACGATCAGCAGCCTCAACACCCAACAAACTTTCTCGCATATTCCGCAACTCTTGAGCAGAGCCACCTTGGTCTTTGATTTCTTGGGTAAGTTGTTGTAGTTCTGCAAATTGCATTGATACTTTGACACCATCGGCCAATGTAGGTGGCAATTGATCTATTAACTTTGCTAACTCAATTGCTTTTTGCTGTGAGGTTAGAGTCTTATTGGCATGTATACGCATTTGATCAATACTAAATTGATTAAAACTTCGCTCATTTCCAAAAAATGCTTGAATTTCTGCTGCATTGAAGAAT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //