Array 1 8357-9483 **** Predicted by CRISPRDetect 2.4 *** >NZ_QVBY02000048.1 Pseudomonas aeruginosa strain PABL071 NODE_48_length_48112_cov_67.2338, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 8357 29 96.6 32 ............................A GCAGGATTTGGAGTCGGAGCGTTTACCTACAT 8418 29 100.0 32 ............................. GTGAACGATGCGAATCGGGCGGGGGTTTGGTC 8479 29 100.0 32 ............................. GCTTGGTAGATGCCTGGAACAAGTCGGTCAGC 8540 29 100.0 32 ............................. CGCGCTGTCCTCGGCCTGGACTGGACCATCGA 8601 29 100.0 32 ............................. TGGGCGAACGACGGCAGCGTCACCCAGGCGCA 8662 29 100.0 32 ............................. ACAGGGACGTTCTCCGCGAGCTGGCCATCGAC 8723 29 100.0 32 ............................. GCAGAGCGGATTGCTGCCCGCTTTGTCGGCAC 8784 29 100.0 32 ............................. GGGGTGGTAGCACCGGACTCGCGGATCTTGAA 8845 29 100.0 32 ............................. GCGTACATGACTGAGGGAGAGTCCACGGACCT 8906 29 100.0 32 ............................. TCATATAGCTTGTATTTTTCCTTGCTATGAGA 8967 29 100.0 32 ............................. AAAAACGACGGCATTCACTACGCGCGCCAGGC 9028 29 100.0 32 ............................. GCGTTCATTTCCCAGGACGTGGACCAGCTGCG 9089 29 100.0 32 ............................. GCCCCAAAAAGCGTTGGCGTCATCGGCTGGCT 9150 29 100.0 32 ............................. TTCATGAACGGCAGAACGTTGAGCGCCGATTT 9211 29 100.0 32 ............................. GTTGTTCTAGAGTCCGTTCAGGAGATGCTTCT 9272 29 100.0 32 ............................. AGGTATTCCTTGCCCTTGGCCAGGAGCACGCC 9333 29 100.0 32 ............................. TCATCGATCGTGGCGGCTGCACTGGCTGCCTG 9394 29 89.7 32 ..............C..........G.T. GTATCGACATCGATGGTGACCAGGCTGGTCCG 9455 28 79.3 0 A..........A..C..-.....A....T | C [9459] ========== ====== ====== ====== ============================= ================================ ================== 19 29 98.2 32 GTGTTCCCCACGGGTGTGGGGATGAACCG # Left flank : GGCATCGTTGTACAGGGCGACGAATTCCGCGCCCCAGAACAGCACGATCTGCGCCTTGGCCGGCAGCAGCGTGGCCATCGTCGTCTTCAGGCTCGCCGACCAGGCGTCCGGCGGGCCGAGGGGCGAACCGGCCGCGTCGAGGCTGAGCAACAGTTTCCCGACCGCTCCTCCGTTGGCCAGGAAGGCCGGTGGATGGTCGAGGGTGTTCGGGTCCGGTTCGATGGTGAAAGGCTGTGCCATGTCTGCGGAGTCTTGCTCGGTTCCGGTTGAGGTGGTGGGTTGCATGGAATATAGGAGGGCGGTGGGTGCGCTTGCGTTCAATCAGCTTGGGGGACCGCGGGATCCCGATGCGGGTAGGTTTCGAATGGTCCCGAGGGAGCTGCCGGATTAGGCTGTGGGATGAGTACGGCCCTCATTTCCAGGAGCGGCGCGAGGGCCGCTTGGCCCGGTGGAATTTTGCTGTTGTTTTTCTTTTTTTAAAACAATGGGATACGGTAAGG # Right flank : TGTCTACGCTCCTGCGGTTCGCCCCACCGCGCGGTATTTCCCATGGTGGGGCGAACCGCGCGGCACTACGACCAGTGGCGTAATCACCAGTGTCAGCCGCCAGTTGCCGGAGACGCGGATCGCCCACCGTCCGGCAAGATCCTCTTTCAGGGCATGGAGTTTCCAACCAACCTGGTTCACGTCGCTGGGGATGCAGGCTTCGCTCAGCACGAATAACTGACGGCGCAGGCATTGGGCGGGGGCTGCCTGGATACCTTGCCCTTACCGGTCTCGAAGAAGGCTTCCAGCCCCCTGTGGCGGAAGGAAATAGATTGTGAACAGGCGGCAAGTGAAGGTTGTTAGTGAGTTAGCGGAATGTCCGACGTTCGCTGTTGCACCATGGAGTTCCTGCTAATTTGGACAGGGGTGGTCGGTCCGGTCCATATCCCTCCTGCGCTCCTTCGCTTGCTAAACGGGGGGAGCAGGCGCATCCCTCGCTGGCTGCTCCTTGACGAGCGTCA # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGGGTGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCACGGGTGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 18656-20394 **** Predicted by CRISPRDetect 2.4 *** >NZ_QVBY02000048.1 Pseudomonas aeruginosa strain PABL071 NODE_48_length_48112_cov_67.2338, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 18656 29 100.0 32 ............................. GGATTGCTTCGCCCATCTGCCGGGCCTTGCGA 18717 29 100.0 32 ............................. ACCGGATGCAGTCTTAATCCCTTTTTGCGTCG 18778 29 96.6 33 ............................A GTTATGCTGGTGCTGTCATAGATCATGTCGAAC 18840 29 100.0 32 ............................. CTCTACGACGAGAAGTTTGGCCTGTCGCTACT 18901 29 100.0 32 ............................. TCTATGGGAGGTGGGGAGTGAACGAGACCGTA 18962 29 100.0 32 ............................. TTGAGGGCAAACGACGTTTTGCCCATCGAGGG 19023 29 100.0 32 ............................. TAACGGCCCGCCCCTTCACGCGACCTCCCGCG 19084 29 100.0 32 ............................. CCAAGAAAGAACGCCGAAAGGCCGTTAGGAAA 19145 29 100.0 32 ............................. ACGTTGAGTACGTCGGCGCCGTACTTTTCGTC 19206 29 100.0 32 ............................. CGGGCCTTGGCAGCGAGCAGGGCCTTCATGCC 19267 29 100.0 32 ............................. CGCACTGATGCCAGAGCCGGAGTCGCGACCGG 19328 29 100.0 32 ............................. TCGGCCATCACTGGCAAGGTGCGCGAAGGCGT 19389 29 100.0 32 ............................. GCGCTTCACGGAGACGGCCTGCTGTTCCCTGC 19450 29 100.0 32 ............................. TTCAGCAGGGCGTCAGGGATGGCATCGTGTCC 19511 29 100.0 32 ............................. GCTACTGTCGAAGCCGGCACCACTCTGGACGC 19572 29 100.0 32 ............................. GCCGGATTCCGCTGCCGGGCTACATCATCCCG 19633 29 100.0 33 ............................. CGGGGCATGACTTCAACCCACCCCCAGCCCTCC 19695 29 100.0 32 ............................. TCGCACTTCCAGCCATGGCTGGACAAAGCGGC 19756 29 100.0 32 ............................. GCAGTCAAGGCTGCCGGCGGCCAGTCCGCCCT 19817 29 100.0 32 ............................. GCCAGCAGGGATGCCAGCACGCAGCCAGTCGC 19878 29 100.0 32 ............................. CAGTGACGGCAGCAGACGCGGCGATGCTGGAT 19939 29 100.0 32 ............................. TCGGTAGACGCACAGATGGTCGAGCAACTTCG 20000 29 100.0 32 ............................. GCGCAGGGCAAAGCCAAGGTCACCGCCGGCAC 20061 29 96.6 32 ...........A................. TTCGAGGTCAGCGGCTTCGGCCCCGGCGAGCA 20122 29 96.6 32 ...........A................. CCGGGAATGAACGTTCCCATGTCGGCTACGCC 20183 29 96.6 32 ...........A................. GTCGCCAGGCCCACGTCGGCGGATCACCAACA 20244 29 96.6 32 ...........A................. ATGTAGCTGTTACGCGGTCCCGCGGTGCTGAG 20305 29 96.6 32 ...........A................. GTGATGGAGCGGACCGCCCCGAGCACCGCAGA 20366 29 93.1 0 ........T..A................. | ========== ====== ====== ====== ============================= ================================= ================== 29 29 99.1 32 GTGTTCCCCACGTGCGTGGGGATGAACCG # Left flank : TGACCCGCATCATTCCCACCATCGAAGAGGTACTGGCCGCCGGCGGCGTCGAACCTCCCAGCGCACCGCCCGAGTCGGTGCCGCCAGCCATTCCCAACCCGGAGGGAATCGGCGACCTCGGGCACAGGACGCAAGGGTGAGCTTCCTGGCCGTAGTGGTGGAAAACGTCCCGCCGCGCTTGCGCGGACGTCTGGCAATCTGGCTGCTGGAAGTCCGCGCGGGCGTCTATATCGGCGATGTATCGCGGCGTACCCGGGAAATGATCTGGCAGCAGCTGAGCGAGGGCTACGAGGAGGGCAACGTGGTAATGGCCTGGGCCGCCGCCAACGAATCCGGCTACGAGTTCCAGACCCTGGGCGTTAACCGTCGACATCCAGTGTTGTTCGACGGGCTGCAATTGGTGGCATTCCAGCCTCTGGATCGGACCACGGAATAGAGGATGAGGCGGTAGATTTTTCGAGGTGTTTTTTCTTCTTTAAAAACAATTCTGTACGGTAAGT # Right flank : GTGGAAGTACGCTCGCGCAGCGAGGATGCGATATATGCACGGGGCGAGCCGTTCACTTGAAAAGCCGACATTCCTGGCTGTCCTGTATTTCCCCTTTGGCATGGATAGAGCAGCCCCATAGGGCGAACGACGCCACCGGCGTCATTCGCCATGGCCGGGTCAACCGGAACGTCGAGCGGCTACCAGGCGCTGCTGCAGGCGCGTCAGGAAGGCCACTTCGAAGGCGGTCTTCTGCATCGGTGTGGGCAGGCTGTCGCGGCCGAAGGCGAAGGCGGTCCAGAGCTGGCCTTCGATCTGGTCGGCAAGCCAGTTCTCGGCCTGGCGGACGCCCTTGTCGATGGCGGGCTGGGCGGGAACCGGCCAGAGCAGGGATAGACCGGGTTGCCGGTCGGCGGGGGGAATCTCGACCATCAGGTCCTTGTAGCGTTCGATGATTGCGTCGACGTGGGTCTTTTCCTTTTCATCCTTCGTCATGCTGGGTACTCCGTTTCTGAGAGTCA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGTGCGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCACGTGCGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //