Array 1 36284-39992 **** Predicted by CRISPRDetect 2.4 *** >NZ_UPHM01000048.1 Mycobacterium persicum strain MK4 isolate MK4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== ========================================= ================== 36284 38 100.0 35 ...................................... GACGAGGACGCCACCGATCAGCTGTACGCCGACCA 36357 38 100.0 37 ...................................... TTCCCCGACAAAGGCGGCACCACCCAGCCAGCCAAAA 36432 38 97.4 33 A..................................... ACGCTGCTGCGTAACGATGCGCCGTTGGTGGCC 36503 38 97.4 35 T..................................... CGAACAGTGTCCCCCGGCTGGGCCACCATTTCCGC 36576 38 97.4 35 C..................................... TACTCGTGCACGCCAAAGGCCGCGCGCACGACGAA 36649 38 97.4 35 C..................................... TCTTGGAGCTGGCCAATGCGTAACTCTGACCCGCG 36722 38 100.0 33 ...................................... TACGACGAAGCTGACGAACTGCTCTACGTCGGA 36793 38 97.4 35 A..................................... TTCGCGGTTGTGCCCGGGAAATGGCCAGGGTTTGA 36866 38 97.4 38 T..................................... CATCAGCCGGCGTAGAGCGGGCAGGATGTCGGCTGCGA 36942 38 100.0 35 ...................................... CCCCGTGTGCGTATAGAGCCAGGCGAGGGTCTCGA 37015 38 97.4 35 C..................................... CTTGCTGTACCCGTCGCGGGTGATGGACGTGTACA 37088 38 97.4 36 C..................................... GGGTTAGGGATTTGCGACCAGTGCCACCGTGAGGGC 37162 38 100.0 35 ...................................... CGATCGCGTGGGTGGACCACGGCTGGGTCGGGGAC 37235 38 100.0 37 ...................................... GCTACCCCCGCCCTACGTGTGTTGGAGACACCGTGGC 37310 38 97.4 35 C..................................... AAGAAGCGCCTCGTGGCCGGATTCTTCGCCATGCG 37383 38 100.0 36 ...................................... TCAACGTTGAGGTCCCGCTTGAACTTTGGCCCGTCA 37457 38 100.0 36 ...................................... AGCGCGAATCACGCGGTGTGTGCGGTATGTGGAGAG 37531 38 97.4 36 C..................................... CCGGGCACCGATCCGACATTGATCCCCGGAGGCGGG 37605 38 100.0 35 ...................................... CGCAATCTCACTATCACCCGAAAACTGGTGTGCTG 37678 38 100.0 35 ...................................... GACAAATAGGAGAACGATCGCAATGAGTGAAACCA 37751 38 97.4 34 C..................................... TTTGGAATTCTACCTCCACAAGGCCCTCTATATC 37823 38 100.0 34 ...................................... ACGAGTTCAAGCTCATCATCGGCACCAGCGCAGA 37895 38 97.4 34 C..................................... CAATTCGCCGGGGCCGGTATCGTTTGAGATGAAT 37967 38 100.0 35 ...................................... AAATCTCATCCGTGGCCGGCCGTGGTGCGCCAAGC 38040 38 100.0 36 ...................................... TACGACCACCCGTCCGAACGCGCCATCCAGATCGGT 38114 38 100.0 36 ...................................... ATCCGAGACGCCGCTATAGCAAGCACCTTTGCGCCG 38188 38 100.0 35 ...................................... AGATAATCGGCTAGAGAATCTTGAACTGTGGTCAA 38261 38 97.4 35 A..................................... CGAAGTACAAGCTTTCGCGTGGGACAAGCAGACCA 38334 38 97.4 36 A..................................... ATCACTGATCAGCCGCTGATTGTGTGGTCCGCGCAT 38408 38 100.0 35 ...................................... ATTTGAGAAAGGAAACTCCCATGGCCATTATTGGG 38481 38 97.4 41 T..................................... CTTGGCGCACCGACCGAAGCCACCCCCGGCCAAACCGCGGC 38560 38 100.0 36 ...................................... GGGTGAGCCGACGCCCATTTTGGTTCCGTCTTTGCA 38634 38 97.4 35 C..................................... CCGGGTGTGGGAGCGCAGGGAAAGCGAGGGAAGAT 38707 38 100.0 36 ...................................... CTAGGTGTGGTGCGTGCAAGACGTCGTGGGGTCCAG 38781 38 97.4 37 A..................................... CAGATACCCAACTATCCGGTCCACCATCTGCCGGCGC 38856 38 100.0 37 ...................................... GCTCCGGTGGACAGACGTCAGAGATGGGGCCGCGCCC 38931 38 100.0 34 ...................................... CAGCCCGGAGCTATAAGGCTTATACGATAACGTC 39003 38 100.0 35 ...................................... AGCGGTGAGACACGCGACGGCTGGAATGTAGCCGA 39076 38 100.0 35 ...................................... TTTGGCCCTGCACATCACCCGGACCATGGACCAGG 39149 38 97.4 37 A..................................... AGGTTGAGCCATGTAGCAGTCCCGCTCCACCACCGCC 39224 38 100.0 35 ...................................... CAGTCGTCGGCGCGCGGTCGAGATCCGGGCGCGTA 39297 38 100.0 33 ...................................... GGCTAACCCCCCGCGGGTGAGCCCGCCGAGTGG 39368 38 100.0 35 ...................................... CGTCGTAACTCCTCCGCCGCGGGATCCGCCGTGGA 39441 38 97.4 36 C..................................... TCATTAATCTCCAACGACACCGGGCCTGCCGAATTA 39515 38 100.0 36 ...................................... AACGGAATAACGTCACGAATCACATCGTCGATCTGC 39589 38 100.0 33 ...................................... ACCGACGCGAGTAGCCGACCCGTCGAGTTGCCT 39660 38 100.0 37 ...................................... TGCCGGTGCTTGCCGACCCACGCAAGATCCTCGTCGC 39735 38 100.0 35 ...................................... CTTTCAGGCGGCGATGCGGAGTAGGTCGATGATGG 39808 38 97.4 35 A..................................... TTTTGACCCGAGTGTCCAGCGATACCGCACACGGC 39881 38 100.0 36 ...................................... ATCCGCGAAGCCGACCTGGCCGCCACACCGACCCAC 39955 38 86.8 0 C.....A..........T......T............T | ========== ====== ====== ====== ====================================== ========================================= ================== 51 38 98.7 35 GGCGGCGCCGGGCTTTGCTCGGCGCCGAGGATCGGAAC # Left flank : ACTTCAGGCGCTTCTTCTGGCACGGCACCTTCGCGGCGATCTGACGCATTATTTCCCATATAGAACGACAGGGCGGTGAGATGGAGATACTAGTGGCCTATGACATCAGCACGGCGTCACCTGACGGGGAGCGTCGTCTTCGCGGGATAGCGAAGGTTTGCGAGGGGTACGGTCAGCGTGTCCAAAAGTCAGTTTTCGAATGTCAGCTGGAAATGCGCGAAGTCCGCCTGCTGATAAATGACGTTGAGAAGGTTATCGACCCGAAATCCGATCGGGTAGCCGTCTATAGACTGCGTGAGCCGTACCGTCGCTACGTGGTGACCCTTGGCCGTGGGCCAGAGGTCGACTGGCGGCACCCAGTCATTTTGTGAAGGGGCGGACCCGGGTTAGACGTGCGACCCGTAGTAGATCCGCCCGAGGATTCGGGCTCCCAAAGCGCAGAACGGTTTGTTGATAAGTTGATGATTGTCGCGGTCGCCGAAAAATAGCTGTTCGCGAAG # Right flank : TCGACCCCACGGCTCACACCATCGACAAGGTTGTCAAGCGTTGGATGACTTTCTGCGGCGCCGATGATTCGAAAGATCAGGCTCGACAAATGACCCTAGTGGTGTGTCACGCAAATAGTTAACTGCATGTTCGGTATTCTGGATCGGTGAGCGCATCACCTGCAGTTGCTTTGGCCATGTCGGTTGGCGAGCGTGAAACGTTGGAGAGGTTGGCGCGGTCTGATTCGGTGCCGCATCGGCAGGTGATGCGCGCGCGTGCGTTGCTGATGGCTGCTGACGGCGTGGCGAACACCCGCATCGCTGAGGAGGTGGGGGTGACACCGGTGACGGTGCGTAGCTGGCGCAAAAGGTTCAGCGAGGACGGGCTGGCCAAGCTGGGACAGGTACGTAGAGGACGCGGCCGCAAAGCCACGATCTCAGACGCGCAGGTCGCTGAGATCGCGCGATTGACCACCGAGGAGACCCCGCCCGGCCACACGCATTGGTCATGCCGCACGATG # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.94, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCGGCGCCGGGCTTTGCTCGGCGCCGAGGATCGGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GGCGGCGCCGGGCTTTGCTCGGCGCCGAGGATCGGAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.10,-7.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //