Array 1 50587-51633 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNAV010000003.1 Bacteroides uniformis strain 1001302B_160321_G4 NODE_3_length_222678_cov_25.8642, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 50587 47 100.0 30 ............................................... CATTTCTTGTGGAATGCCGGACGCTAACAA 50664 47 100.0 30 ............................................... AGTCGAAAATCGAAGAACTGGAGCAGCTTC 50741 47 100.0 30 ............................................... CCTGAAGTCCGGCACTTGTAGGCTGGGGTT 50818 47 100.0 30 ............................................... TAAATACCAATAGCATGCCATAGCCTATAC 50895 47 100.0 30 ............................................... ATCTTGTCTTTCGGACAGAAATCAAAATGC 50972 47 100.0 30 ............................................... TGCTGATGCCATCAAAACCGCACAACACCC 51049 47 100.0 30 ............................................... ACTGATTTGCCAAACATAATAAAGATTATC 51126 47 100.0 30 ............................................... GGCTGATTGAAGTATACCCAGTAGAACATC 51203 47 100.0 30 ............................................... CGAAGTTCCGCATGGTCTCCCATTGCTTCT 51280 47 100.0 30 ............................................... AAATTAAAATCCCCGAAAGCGGAAGTGACT 51357 47 100.0 30 ............................................... GTCACCCGAAACGATTGCGGCTCCGGGTAT 51434 47 100.0 30 ............................................... CCAATAGGTTATGTCTCCATCGGCATATCT 51511 47 100.0 29 ............................................... AATTAGTTCGGCAAAATCTTTGTCCTCTA 51587 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 14 47 100.0 30 GTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATTGGAAACAGC # Left flank : TTCTGTATGGCAGGGCCTGCTTTCCATATTTCATCCAGAAACACGACGTCGGCTGTGGGCAGATAGCCGTCGATGGCACGTTCGTACTTATCGGATTCTTTCAGTCGGCTGATGCTGACGGGACCGAATATCTCGTCGGGTGTAGAGAATCGGGACATCAAGTATTCGAAGGCACGGGCATCTGTAAAAGCAGACTTTAGCCGCCTGGCTACCATTGACTTGGCTACTCCCGGAGGCCCCAGGAGCAGGATGCTCTCACCTGCCAGGGCTGCCAGCAGGGAGAGGTTTATTTCGGTTTCTTTTTCGTATACTCCCCGGTTCATTTCGGAAAGGAGGAGGCGGATGCGTTGGATCATTTCCACAATATGATTTATTTATAGTCAGTACTCATGTATAAAGAAAAGTGTGTAAAGATACCAAATAGTAGCGAAATCAGAGAGATTCTTATTAAGATTCACTATTTTTGGAAAACAAATACACACACAGACACGCACACACAC # Right flank : CAGACTATTCATTATAATCTAATAATCAAATGGTTAAACAATCAATTTGAATCACAAAAAGCAAACAGTTTTCCACTAAAAATCCCACCAACAAGTGGGATTTTTACTTTTAGAATAACTCCAACTGTTGCCCCGGTGTATTCACATCTTGAACTTTTTTCCCATAAAAGAGCTCAATATTACCAAATTGTTTGTCCGTAATACATATAATTCCCACCTGTCCAAACTCCGGTAAGAAAGATTTAACTCTTTTTATGTGCACATCTGCATTTTCACTGCTGGCACAATGTCGTACGTAGATGGAAAACTGAAACATAGTAAATCCATCCTTCTGCAGGTTCTTCCGGAAGTCTGCATACGCCTTCTTATCCTTCTTGGTATCAGTAGGCAAATCAAATAACACCAGTACCCACATAATGCGATATTCACTAAAACGGTCCATTACATTTCCGGATATGCTATTTTACGCAACTCTCCATTAAAACATTTATAAAGAGAAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATTGGAAACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.30,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [66.7-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.27 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //