Array 1 203271-204787 **** Predicted by CRISPRDetect 2.4 *** >NZ_PPGA01000003.1 Paracoccus denitrificans strain ISTOD1 IIFCABNI_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ========================================================================================================================================================================================= ================== 203271 32 93.8 34 T.........A..................... CGGGCAGAGCGGAATCGTGTCCATGTCGCTGGCG GAT [203275] 203340 32 100.0 35 ................................ ACGATCACCGAGTTGGAACCGTGGCGGGACGAGGA 203407 32 100.0 33 ................................ CTGTCTGGCGAGGGCGGGGCGCAAGGGCGGATG 203472 32 100.0 34 ................................ GCCAATCTCGACGGAATTCGTAAAACCATGCACC 203538 32 100.0 36 ................................ ATCCTCTTCGACCAGCAGCTGACCAAGGATCAGCGC 203606 32 100.0 34 ................................ ACGCTCTTGGCGCGCGACAGGGTGATACCCGCCG 203672 32 100.0 35 ................................ CCGTGCCGATCCTTGCGCATGTGCTTGGTCGGCAC 203739 32 100.0 34 ................................ GTCCGCTGGCTGACCTCGGAGCGCCGCCGGATCC 203805 32 100.0 35 ................................ TCTCGCGGCATCAAGAAATCGGAAAGCGAACTGTC 203872 32 100.0 36 ................................ GATCCGCTCGTATTGCGCGCGCACTGCGCCCAGGTC 203940 32 100.0 33 ................................ CCCGCTTCGGCGGTGGGCCACGATGAAGATTCG 204005 32 100.0 34 ................................ ACGAAGTTATAGGAAACGATGGGCGTCCCGCCCT 204071 32 100.0 34 ................................ CCCCTCAGCAGCTTGAAGAGCGGCGCGACCGCCC 204137 32 100.0 34 ................................ GCGTGATGGATCGCCCCTCGATAGTGTAAGCGTC 204203 32 100.0 35 ................................ GGCCCCTGCGGGCCAGGATCACCGGGATCACCGGC 204270 32 100.0 35 ................................ ACTGGACGCGAATATCGGAAGCCTACGAGGTCGCG 204337 32 100.0 34 ................................ CCGGTCGAGCGCGCTTTGCTCGCGGTCGATGGTG 204403 32 100.0 35 ................................ AGGTCGAGACTGCGTGGCTGCTGGCCTGGCGCCTC 204470 32 100.0 35 ................................ GGCATCCACGGCGGACAGGGCCCCGGCGACGAACC 204537 32 100.0 185 ................................ ACCGGCAAGAACGTCACCTCCGAGCCTTGCAGTTCAAAAGGGGGGCGCGGACGGCTGATCGGACGCACGAAGGGCGGGCTGAACTCGAAGCTGCAGGTGGTGGCGGACGCGAAGGGTCGTCCGATCCGGATGTTCCTGTCGGCGGGGCAGACCTCCGACTACATTGGCGCGCGGGCGGTGCTGTC 204754 32 75.0 0 C...AT........C.......T.C.T..G.. | G,C [204765,204782] ========== ====== ====== ====== ================================ ========================================================================================================================================================================================= ================== 21 32 98.5 42 GTCGCCCCCTTCGCGGGGGCGTGGATCGAAAC # Left flank : ATCGCCATGGCGCCGACAGCAGTATGGAGCGCCGGCTTGAGACCTTCCGCGACCCGATCGCGCCGGAAATCTCGGCCGCGACCAGCCCAGATTTTGGCCCGGTCGCCAAGGAACTGGCTAAGCTGATGCGCCCTGCATCTTGCGGCTTCGACCTGTCGGTCGCGGCGCGCATGGTGTTTTCCTGTCTGGTTGACGCGGATTTCCGTGACACCGAGGCATTCTATGCCGGACTGAACGGCACGCGGCCGGATCGCGACTGGCCGGCCCTGGCCGATCTGTTGCCGGAATGGAGAGACGCCTTCGATGCGCATATGGCGGGATTTCGCCAGAATGGCTGCATCAACCGCCTGCGCGCCGAGATCCTGATCCATGTCCGGCAGGCTGCGGCGATGACGCCGGGGCTTTTCACGCTGACCGTGCCCACCGGCGGCGGCAAGACGCTGGCTTCACTGGGCTTTGCGCTGGACCACGCGGCACGTTATGGGCATCGCAGGATTATC # Right flank : CCGGGGTTATGATGCCGACTAGTTCCGCAACGCGCTGATCGAGATGGGGATTTCACCGTGTATCCCGTCCCGCATCGGTCGCAAAGCCTCGGTTCCGCACGACACCGAACTCTACCGCCTGAGCCACAGGATTGAGAACATGTTCGCACGCCTCAAGGACTGGCGCCGTATTGCAACCCGCTAAGACTGATGCCCCATTCTGTTCCTCTCCGCCTGCGCCCTGGCTGCGACCATCATATATTGGTTGTGAGCCCTGACTCTAAGCGATCAATTTTCAGGAGACCTTTTGGGTTTGGTGGATAACCATTCAGAATAGAGAGTGCGCTCGTCGCTTGTTAGCGTCGCCTCGATCTGGCAGCGCAGTTCTGAGTACCGGCGGTACTCTGCCATATCCTGAAACCTAGGAACCACATACATTGCTGGGCAGGGGAAGGGCGCAAAGCCATAATATTCTGGATCGTTGTCGCGGGCCCATTCCCATCCCGCGTCCTTGTAAAAGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCTTCGCGGGGGCGTGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCCCCCTTCGCGGGGGCGTGGATCGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-7.00,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [31.7-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //