Array 1 879776-876691 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMDD01000002.1 Saccharibacillus endophyticus strain CCM 8702 sequence02, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ========================================== ================== 879775 29 100.0 37 ............................. ATCCCGGAACCGATCCGGGAACCGGTGGTGGGAACGA 879709 29 100.0 35 ............................. AAGTTTCACGGGGAGCTGTGCGAGATCCTGAACGT 879645 29 100.0 36 ............................. CGCCTTGAAGCAGCTCGCGGTCCTTACCGCCTTCCA 879580 29 100.0 34 ............................. GATCACCACGGGCAAGCGCCGGCGGCGCCGCAGC 879517 29 100.0 36 ............................. GGAGCTGGAGCCGACGCTCTCAATGGACGAGCTGAA 879452 29 100.0 36 ............................. GGATATCGAAGTCGACGGCCTGGGCGAGTATACCGT 879387 29 100.0 35 ............................. ACGAACGACAGCTGTACCGTCATGCCGTCAATGCG 879323 29 100.0 36 ............................. ATAGCTGTGCCTCAGCCTAATGATTTTGTCGCTTAT 879258 29 100.0 36 ............................. AGTTTCACAGGCGGCTAGGGCTTGGACCCCCTAAGC 879193 29 100.0 37 ............................. GAGGGCTGATGCGTTTGTTGCTGCTATTCCGGTTGGG 879127 29 100.0 36 ............................. ACTAACGAGGAGCGAGTAAACGATGGAAGCCTTCAA 879062 29 100.0 37 ............................. TAGGACATCGTGAAGCTGTTGACGCGTTGGCGCCGTG 878996 29 100.0 35 ............................. ACGGAAAATCCGCAATTGATCCCCGAGGCACAACC 878932 29 100.0 35 ............................. AATGGAGTTGGACGCTTATTTGCGTATGCAGGCGG 878868 29 100.0 35 ............................. TACATTCTCTCCTTCTCACCTTGAACCGCAGCAGC 878804 29 100.0 36 ............................. TTCCATATGCGAGAATTCCGAATCTTCAACAAACCG 878739 29 100.0 36 ............................. GTCGGTCTTCCGCTCTCAAATTAATCATGTTCAATC 878674 29 100.0 35 ............................. ATGAGTGGAAACCTGATCCCATCAAACCGAAAGTA 878610 29 100.0 35 ............................. GTAGGAGCTACGACGACAATATCGGCAGCCGGATC 878546 29 100.0 35 ............................. ACTGGTCAGCATGCTGGAAGAGTGCCCGCTGGATG 878482 29 100.0 36 ............................. TTGGCCGGGCAACCGCTCGATCAGCGGCGTACGGTA 878417 29 100.0 36 ............................. TCCGGTGATCGAAGCGCTTGGGGCGTAAGTGTCAGT 878352 29 100.0 35 ............................. CTGGATAATCCGACACTACTAAGTATTGAAAAAGA 878288 29 100.0 35 ............................. TCCGGCAGCCGGGTACCGGTCCGGCGCGCTTCCGC 878224 29 100.0 36 ............................. TACAAACCACACGCTTCGATCTGAGTCTGATCGCCC 878159 29 100.0 37 ............................. CACGGACAATACCGTCAACGGATGCCGCGCGCTGCTC 878093 29 100.0 36 ............................. CGATTTCGGATATCTGGACCGGCGTTTTAGGTTTCT 878028 29 100.0 35 ............................. TTCCATGATAGAATCAAGAGTGGCCCGGACCTCGG 877964 29 100.0 36 ............................. CTCTTTGCTCAAACTTATTTTCCAGACCCGCTTAAC 877899 29 100.0 36 ............................. ACCGTTACAGCCACCGATCATAACGCGATCGTGACG 877834 29 100.0 36 ............................. ACGTACATCCGGATCGGCGTGTACTCGCTGAGGATG 877769 29 100.0 36 ............................. TCTTCCTGAAGAGAAGAAAACGATGGGCAAAGAAAA 877704 29 100.0 36 ............................. ACGGAACTTGTGCGCCTTGTCGGCAACGCAGGAGCG 877639 29 100.0 36 ............................. ACAGGTGGTTCGGACATCGTCGAAAAATCGATCCGC 877574 29 100.0 33 ............................. GGCTTGGACATAAAGATAACGTGGTTACTCTCG 877512 29 96.6 37 .............T............... CTAGATTGGGCGTCACAACCTACGACTTCGATCAATT 877446 29 100.0 37 ............................. CTGTATAATCCGGTCAGCGCAATAACTCTCGGGGAGA 877380 29 96.6 37 ............A................ TCTTAAACGCAAAAACGGCCCCGCTGGCGCGTGCCAG 877314 29 89.7 42 ..........................GGA TATGAAGCAATGCCCGTATCAAGCGCGCTGCCGAGCTGCTTT G,G [877286,877289] 877241 29 100.0 36 ............................. AATGGCGAATACAATCTTGATTTTCAAAGCAAGGAG 877176 29 100.0 36 ............................. TTAAATGGTGGTGACAACTTGACTACATCCGTATTC 877111 29 93.1 36 .........T..A................ GTCCGAGACGTTCCGCACCTTCTCTCGCTTGGCATC 877046 29 93.1 36 ............T.......A........ GCCGGATCGGCAGCTTGGAAAAAGGGAAGGCTCCCA 876981 29 89.7 36 .......T.A.......C........... CATGTCGTCCCAGATACGGCCAACGTCCTCGATCAA 876916 29 93.1 36 .......T........A............ GACTTTGCAGCTGATCGGAGAACTCGAGTCTTTGCC 876851 29 96.6 38 .......T..................... CATACTCCGCAAAGCATCGCCGCGCCTATCTCGGCAAC 876784 29 86.2 36 .......T.....A...A...T....... TTGCCTGGATGTGCCGGGCGGTTTGGTTTATCTCCA 876719 29 86.2 0 A............A.....A........A | ========== ====== ====== ====== ============================= ========================================== ================== 48 29 98.4 36 GTTTTATCTGAACGTAGTGGGATATGAAG # Left flank : ATGATCGGTGACGAAATTTATAAACCTTTTAAAGCGTGGTGGTAGCATGTTTGTAATTATTACGTACGACGTCGGTGAAAAAAGGGTAGGCAAAGTCTGCAAAAAACTGCGCGAATATCTGGATTGGACGCAAAACTCGGTATTCGAAGGCGAAATCACGAAAGGCACGTTGACGCGTTGTTTGGCCGAGTTGAAAACGATCATGGATGAAGAGGATTCCGTCTATTTGTATAAAGTAGAGAACCCGCGTAATTTGGTAAAAGAAGTGCTTGGAACCGATCGTTCTTTTTATACAATGTTCTTATGAGAAAGAAGTAGTGAAGTTCATTTGCATCGAACCGGAAAAAGAGCGAAAGTGGCTTGAACCCTTGATAGACAAGGGGGTGGGGGTTATTTCGTAGGGCTTACGTTTACACGATTGGCGGTTCGATGCAAATGTTGCCCTTGATGCCGTTACGAAATGGCTCAATGGTGCGGGTTTTGAACGGTTTTTGAGCGGG # Right flank : AGCGATAAAATCTGCTAGACACTGTTCATCAAGTTGGTTGAGATATGAAGAAATCATTTTGATTCTTCAAATATTGTAATAGCTATAATAAGTGAGTACCTTGTCAACACTAAATGATGTTAGCTTTACATATTAGGTAGGCAAGTGGAGTGAATATAAATGGGTTGATATTGACCAGCTTGGAATCTGGGGTGAAAAAAATGAACCTTAACAAAAGCCGACCCGACCGCCTGATCTTCCCCTCCATCCGCTTATGCCAGCCGGAGTGGTATGGGGAGGGTTCATTCCAGCCGAAAGCTTGGGATCGCGCCGGATTGCTGGTTGTCGAAGGCGGCCAAATTACATTATCGCTTGACGGGCGTTTGCATCCAGCCGAGGCGGGCGATCGTTTCTGGATTGCGCCGGGTACGGAGGTGGGCGGACATTGGGGAGATGGATTCCGCTGCTCGCTGCTGCTTTTTTCTTGTCGGCGCATGGAGCGTTTTGGCGGACAGTGGTTG # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTGAACGTAGTGGGATATGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.07%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [25-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 2 891859-889306 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMDD01000002.1 Saccharibacillus endophyticus strain CCM 8702 sequence02, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 891858 29 100.0 36 ............................. GCTCGTCCTGGGCGTTATCTTCTCGCCAGTCCTGTA 891793 29 100.0 35 ............................. GTGTTCCGGTTTTGCCGGAGGATCCGCGGAACAGT 891729 29 100.0 36 ............................. CCTGATACGAGGAAGGTTGAGATTTGGAAGGATGGT 891664 29 100.0 36 ............................. AGCGAAGCGCCGGGGGCGCGCGGAGCGCGGTTACCT 891599 29 100.0 35 ............................. TTCGGCGCCTTAGCCGGCATTATGGCTACGTACGT 891535 29 100.0 35 ............................. AGTTTCGGATACACGACTTCAAGCGCCTTATACGG 891471 29 100.0 36 ............................. AAAAATTCATCGAATGGATCTCGAACGAACTCAAAT 891406 29 100.0 36 ............................. GGTGGCCGGAATCGTCGTTCACCAAACGCCAACGAG 891341 29 100.0 35 ............................. CAAATTGGTCGTCTCGCTGTCGAACACGATCGACG 891277 29 100.0 36 ............................. TTCGATGCGGCCTTGTCGATCCAAGCGAGTTTTTGT 891212 29 100.0 36 ............................. CGATCCTGGACCGTGGATTCGCGGATACGGCGTACG 891147 29 100.0 37 ............................. GCTCATGCAGGCGAGCGTTATCAACGACTACGGCGTC 891081 29 100.0 35 ............................. ATTAACGCCAGGCATGGCCGAGAACGTTTCCCGGT 891017 29 100.0 36 ............................. ATTCATAAGCCGGCCCGACGCCCTCACGTCACCGGA 890952 29 100.0 34 ............................. CAGATCCGATGCCGGACTACAATTCCGGTACCGA 890889 29 100.0 32 ............................. ACAGATGAAGAGTATGATGTTTCAGAAGAAGT 890828 29 100.0 35 ............................. TCGCGTCGCGGTGATTTTCGGGATATCCGATCCGT 890764 29 100.0 36 ............................. CGCGTTCTTCATGTTGTATAAGTGCGGTTTCGGTTG 890699 29 100.0 35 ............................. ACTAATGCGGACGAAGAAGATAAAGAGTCTACAGC 890635 29 100.0 36 ............................. TATTACATTTGTTTCTGCCGGAGCATTTGATGACAT 890570 29 100.0 36 ............................. CAAGCCAACGACGCACTGTAACGAAAATCGGGATCG 890505 29 100.0 36 ............................. CAGCGTCACCGACGATCGGCGCGCCCTGGTCGCCCA 890440 29 100.0 36 ............................. ATTTTTGAGTCATCGCGTTTACAGTCATTTCATTCT 890375 29 100.0 36 ............................. TGATGTATCCATCGTCAGCTAATACCAGGCATTCTT 890310 29 96.6 36 .......................G..... CAGGCTGACTACGAAGGCGTGATCAGCGTCAAAAAC 890245 29 100.0 37 ............................. GATTTTCCACTCTCTCACGATGGGCGAAATTCTGATC 890179 29 96.6 35 .....................G....... ATCTTTGTTGCCCGCCAGGATCTCCGAGCCCGCCA 890115 29 100.0 36 ............................. AGAAAAATCGCGTAGTGGGCAATAATAGTAGGAAAC 890050 29 100.0 36 ............................. CCGGAACACCCGCAGCGTCGACAATCGAAACACCCG 889985 29 100.0 36 ............................. TCATTTCGAAATGAGGAAGCGAATATGTTCATGTAT 889920 29 100.0 37 ............................. GATTTTCCACTCTCTCACGATGGGCGAAATTCTGATC 889854 29 100.0 36 ............................. CAGACAGATAAGGTGACGGTGGCCGCTCCGGATCCG 889789 29 100.0 35 ............................. ATTGCAGGATCGTAGCAGCCGTGAATTGCAGCGAT 889725 29 100.0 36 ............................. TGTAGAGCCGCTTTGCCACTTCGAAAACCGTCCACT 889660 29 100.0 36 ............................. TTTTTACTGCGTCACCCCACATGTCGATTCCTCCTT 889595 29 100.0 36 ............................. CGATATCTGCGTCCTGTTCGATCGCTCCGGATTCTC 889530 29 100.0 36 ............................. TCTTCTTCATCCCCTTCTATAATCATTCCCGCTCCC 889465 29 100.0 37 ............................. TACAAATTGGTTATCAAGCAGATCAAGGAAGAGTTTA 889399 29 93.1 36 ..................A.........A TTGCTACGCCCCGGTCCAGCCGTGCTCGTTCCTGCT 889334 29 75.9 0 T......AC...............A.GTC | ========== ====== ====== ====== ============================= ===================================== ================== 40 29 99.1 36 GTTTTATCTGAACGTAGTGGGATATGAAG # Left flank : GTACGAAGGGTTCGCGAAAGGCGAGAAGCCTTACTGGGAGCTGCTGCACGTGCCGAGCGGAGCCGGTATGAGCGAAAGCGGAGACTTCGGCGCTGCCAAGCTGGGATTGTGGGGATCGGGACATGTGGTGTCGCCGGAGGTGTTTGTTGATTTGGAATTGGAAGCGGGAGAGAGTAAAGCGTGGACGCGGACGTATCGGTTTTGGGCTGCGTAAGGAAGGCATGGCTTTTCTGTTTATTTGGTTGTGAACGGGTAGAGGATATCGTGTATCGTTTGCCGAATAAAAATTCTATGATTGTCGACTTTGTTTAAGACCGATTTTGCATTTTGCATCGAACCGGATTTGTGGGCAAATGGAGGTAAACCCTTGTCTGGTAAGGGTTTGAGACTCTATTTGTTAGGTTTACGATTACGTCATTGGCGGTTCGATGCAAAAGCAAGGAAGAGGGGAGGGGAGAAAGCCTTGTGTGGTAAGGGTTTTGAGCGGTTTTTTGGCGGGG # Right flank : ATGACATTGAATGGAAAAGAGGCACCCATAAAAAATTGAAGATGCCTCTTTCTGAAATGTTGGTTTTTCTAAATGAAGCAATACGCAAAAGCCTGTACAACACCAGTTTAATTGATCCTATTCATCTAGCCTGTTACTTTAGAAACTGTGGTTATTCGAATAGTATCATTTTTCTCTTCAGCAAACGCTTCTCATCCTTCCAACATGATATAGGTCAAGTTTTCAACGACATTGCGATCGTCTCAATATCATCATTTAGAAGTATGCTAAGCGCGAACGGCGCATGGTTTTTAATGTTGAAGGCATTGGAGTATGTAGAATAATCGGCAATGTATTCATTTGCGTAATCGAGTAATTGATAAGCTAATTCTAAACGCAATTTTTCAATAGAAGCACCGTCTGCGACGATGAATTCAATCTCTTTGATGTTTCCCGCGTAACGTCCATCTTCATCTATCTCGTATCCAAAGATGAGCTCGCACGCATTAAGCAGGAAAAGC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTGAACGTAGTGGGATATGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.07%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //