Array 1 462232-463723 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH590863.1 Stomatobaculum longum strain ACC2 supercont1.3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 462232 28 100.0 33 ............................ TCTATGAGTTCTGATGATTGAATGAGACTATAG 462293 28 100.0 33 ............................ TTAAAAAAGATATATCATTAGTAAATATTCTAA 462354 28 100.0 33 ............................ TATGAAATGGGAAAATGCGATTGTGAATGTGGT 462415 28 100.0 33 ............................ TATGAACAAGAAGGATTTTGAGAAAGCACTGGA 462476 28 100.0 33 ............................ CTCATCCGGCTTTAAGTTCTCATAAAATTCGAC 462537 28 100.0 33 ............................ CAGGTTTGTGAACAGCTTGCATTGATTGAAGAG 462598 28 100.0 33 ............................ CTGCCCTTCAGACATTGCGCCAGTTTCATCAAA 462659 28 100.0 33 ............................ TGAATCGCGTTCACAGATAAAACCCTTAAGTTC 462720 28 100.0 33 ............................ TCCTCCAGGATTTCAGCATGCAGGCCATTCTGC 462781 28 100.0 33 ............................ TAGCTATCGTAAGTAGTCGTATAGTTAGTGAAA 462842 28 100.0 33 ............................ TCATGCTTATATACAAGGAAATCTACAATATAA 462903 28 100.0 33 ............................ CAACCGATAATTAAAGCCCTTATAGTTATCTTC 462964 28 100.0 33 ............................ TCAGGATCACGACGGCGGAAGGCAACACCTCCG 463025 28 100.0 33 ............................ TTATCCAGGTCATAACCTTCTGACTGGCCTCGT 463086 28 100.0 33 ............................ TAGTATCATCAGCTTTGCCGTCAATAGCATTTC 463147 28 100.0 33 ............................ TCAGAGATTCAACTGCTTTCATTGCCCCCATCT 463208 28 100.0 33 ............................ TCACTAATAGCTTTTTGCGTTGCAATACTAGGG 463269 28 100.0 33 ............................ CCCTTAAGTTCCTTAAGTTTATTTGCCGCAACA 463330 28 100.0 33 ............................ TAAAGATGAGATACTAAAAAGAGCGGGTAAGCC 463391 28 100.0 33 ............................ TGGATAATACAACGACAGTATTTGCAAATATGA 463452 28 100.0 33 ............................ TATTTTGTCAGTTCCTAATTTTATAAAGCCGCG 463513 28 100.0 33 ............................ TTTCTACATTAGAAAGTGCTATTAACGAGGGGA 463574 28 100.0 33 ............................ TGCTCCGGCTAATCAGCTTAGAATCTTGAAAGC 463635 28 100.0 33 ............................ CCGGCGCGCCTCTCTTTTGTCTACCCTTAGCAT 463696 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 25 28 100.0 33 GTTTTCCCCGCACACGCGGGGGTGATCC # Left flank : ATAGCACATGACCGGATGATTGAAGTTGCGGCTATCCGAGTAGAGGAAGGACGAGAAGTTTCCTGTTACAGTAGCTTGATTTACTGCGATGCTGTACCGGAGACAATTGTTGAATTGACCGGAATCACATCGGATAAGCTAAAAAACGAAGGAAAACCGATTGCACAGGTGCTTAAAGAGCTGCTGGAGTTCATCGGAGATACTCGCATTGTGAGTCACAATGCGAGTTTTGATTGGCGCTTCCTGCAGCAGGCTTGCAAGCAAAACGATATCTTGTCGGGGCATCCTCACATTACCGACACGCTGAATCTTGCAAGGCAAAAAGTAGATGAGGTGGAAGATTACAAACTCTTGACCTTATCAAAGTACTTTCATTTTGCTATACTGGAGCCGCATAGGGCGCTCGCTGACTGCCGCTTGACGCATCAGCTCTACGAGAAGTTAAAGCGGATCGAGGCTGAGGACTAGGATCAACCACGGAAATACGCCATTTCCGAAGT # Right flank : CTCCGTCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTATGTTTTCCCCGCACACGCGGGGGTGATCCTGCCTTCGACCTGGTGCGCATTCATAAATTCGGGTTTTCCCCGCACACGCGGGGGTGATCCTCATGTCACTCCTCCTGTATCGTCACGCGCACCGTTTTCCCCGCACACGCGGGGGTGATCCCGAAGACGAAGAGTAAACAGGAGCGGGCGCAAGGTTTTCCCCGCACACGCGGGGGTGATCCTCGAGTACGACAATGGCGCGAAGATAAGCACGAGTTTTCCCCGCACACGCGGGGGTGATCCCTCGGTTTTCAGCATGCAGGACTCGGCAGACGCGTTTTCCCCGCACACGCGGGGGTGATCCCTGCCGCGCGCACTCGCCGCGTGGGGTTCCGGGGTTTTCCCCGCACACGCGGGGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCCCGCACACGCGGGGGTGATCC # Alternate repeat : GTTTTCCCCGCACACGCGGGGGTGATCCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGTTCCCCGCACACGCGGGGGTGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-1.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 463896-465751 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH590863.1 Stomatobaculum longum strain ACC2 supercont1.3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 463896 28 100.0 33 ............................ TCATGTCACTCCTCCTGTATCGTCACGCGCACC 463957 28 100.0 33 ............................ CGAAGACGAAGAGTAAACAGGAGCGGGCGCAAG 464018 28 100.0 33 ............................ TCGAGTACGACAATGGCGCGAAGATAAGCACGA 464079 28 100.0 32 ............................ TCGGTTTTCAGCATGCAGGACTCGGCAGACGC C [464105] 464140 28 100.0 33 ............................ CTGCCGCGCGCACTCGCCGCGTGGGGTTCCGGG 464201 28 100.0 33 ............................ TCTACTGCGCGCTCGTAGTAGTCATCAAGCAGG 464262 28 100.0 33 ............................ TTATGTTTGCACAAATGTCAAACAAAAATAAAA 464323 28 100.0 33 ............................ TACGCCACTCTCTACCTCCTTACCCCATTGCGT 464384 28 100.0 33 ............................ TCCTCCTGATTTTTACCTTGAAATCCTCTGTCG 464445 28 100.0 33 ............................ TCTGTTGACGTTCAAGAGCTTGATAGACTTGAG 464506 28 100.0 33 ............................ TCAGATCGCGCTCATTAAGATTGTCAGCTCGTA 464567 28 100.0 33 ............................ TGTGATATGAAGATAATCCTACATCATCCGCCG 464628 28 100.0 33 ............................ TGACGTTAATCCAAGCATGATTGTGAATTTTGA 464689 28 100.0 33 ............................ TATGAACACTTTACTTGCAAATATTAGAAACGG 464750 28 100.0 33 ............................ TCGTGTTTTTCCTGAAATTGGTTTGAGTTTCGA 464811 28 100.0 33 ............................ TTTCGTCGATTTGTACAATGAATATTACGGAAA 464872 28 100.0 33 ............................ TACAATAGAAAGACTAGATGCGTTAAAGAATTT 464933 28 100.0 31 ............................ TCATAAAAATGAACCAGAAACCGTATTATGT 464992 28 100.0 33 ............................ TAGTTACTTTACTGTTCTATCGGTTTACTTCTC 465053 28 100.0 33 ............................ TAGCATATATCTTTTGCATTGTAAAGCATTTCT 465114 28 100.0 33 ............................ ATAGCAATAATAGTCACTAATTGCTTTTTGCGT 465175 28 100.0 33 ............................ TAAAAATGTTATTGACAAAAGTAAGTTCGGTTT 465236 28 100.0 33 ............................ TAAGGTTGAAATTGGAAAAAGTTCTATCGCGAA 465297 28 100.0 33 ............................ CTTGCGATTTTTGCCAAGGATATGCGCGTTAAA 465358 28 100.0 33 ............................ CAGGATTGCGGGGCTTGCGCCCCGCGCCATCCT 465419 28 100.0 33 ............................ CCAGCACATGAAAAGCCCGTGATAAATCAGAAC 465480 28 100.0 33 ............................ CTATGGGAACGACCGTTATTGCGGCCTTCAACC 465541 28 100.0 33 ............................ TGTTGCACAAATTTGACGGCTGGAATTTGTGCA 465602 28 100.0 33 ............................ TGGCTCCCGTTAGACTGTGTTCCGGCTGTAGTC 465663 28 100.0 33 ............................ TTCTTGCTCCCTTTACGAAATCTTCAACCATAG 465724 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 31 28 100.0 33 GTTTTCCCCGCACACGCGGGGGTGATCC # Left flank : CCCCGCACACGCGGGGGTGATCCTGGATAATACAACGACAGTATTTGCAAATATGAGTTTTCCCCGCACACGCGGGGGTGATCCTATTTTGTCAGTTCCTAATTTTATAAAGCCGCGGTTTTCCCCGCACACGCGGGGGTGATCCTTTCTACATTAGAAAGTGCTATTAACGAGGGGAGTTTTCCCCGCACACGCGGGGGTGATCCTGCTCCGGCTAATCAGCTTAGAATCTTGAAAGCGTTTTCCCCGCACACGCGGGGGTGATCCCCGGCGCGCCTCTCTTTTGTCTACCCTTAGCATGTTTTCCCCGCACACGCGGGGGTGATCCTCCGTCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTATGTTTTCCCCGCACACGCGGGGGTGATCCTGCCTTCGACCTGGTGCGCATTCATAAATTCGG # Right flank : CTTAAACTCAAAACTTGGGCTCTTAAACAGAAATGTTTTCCCCGCACACGCGGGGGTGATCCTTGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAATGTTTTCCCCGCACACGCGGGGGTGATCCTTGACAAGGAGAGCGGGTGCTTGGCGGCGCCCGGTTTTCCCCGCACACGCGGGGGTGATCCTACCACCTTGCAAATAAGTTTCGATTGTCTTGCGTTTTCCCCGCACACGCGGGGGTGATCCCTTGACGCCGGTTGGCCGTCAATATTACTAATTCGTTTTCCCCGCACACGCGGGGGTGATCCTTTCAGAGAATCACGTAACTGAAAAGTCACTCCGTTTTCCCCGCACACGCGGGGGTGATCCTAGTTACTTTACTGTTCTATCGGTTTACTTCTCGTTTTCCCCGCACACGCGGGGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCCCGCACACGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGTTCCCCGCACACGCGGGGGTGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,1.05 Confidence: MEDIUM] # Array family : I-C [Matched known repeat from this family], // Array 3 465984-467232 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH590863.1 Stomatobaculum longum strain ACC2 supercont1.3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 465984 28 100.0 33 ............................ TACCACCTTGCAAATAAGTTTCGATTGTCTTGC 466045 28 100.0 34 ............................ CTTGACGCCGGTTGGCCGTCAATATTACTAATTC 466107 28 100.0 33 ............................ TTTCAGAGAATCACGTAACTGAAAAGTCACTCC 466168 28 100.0 33 ............................ TAGTTACTTTACTGTTCTATCGGTTTACTTCTC 466229 28 100.0 33 ............................ CCCGTAACATTCAACGAGATACTCAGTTTCGGG 466290 28 100.0 33 ............................ TTTTTCGCCTATACACCCACTGGCGCAAATAAT 466351 28 100.0 33 ............................ TATTTCCATATTGTTGTTCAAATGTAGTTCTAA 466412 28 100.0 33 ............................ TTGCCATATCGCGATTTACTTAGGATTGAAGAA 466473 28 100.0 33 ............................ CAGTGGTAAGGGATACGGAACAGCCTGGAACGA 466534 28 100.0 33 ............................ CGAGCAGTCGGCACGCCGCGTAACCTCACCGAG 466595 28 100.0 33 ............................ TGAACTTTATAGCAACGCTCTTGTGATTTTTAC 466656 28 100.0 33 ............................ TAACGCCAAACAAAGTAAAGACCAAAAGTTCAC 466717 28 100.0 33 ............................ CCGTCTGCCGTTGCGAAATAATCACTTACTAAA 466778 28 100.0 33 ............................ TGAACCAGAAACCGTATTATGTAGAACTTGTAT 466839 28 100.0 33 ............................ TTTGTCTACGATATAATTATCCTGTGCAACGGG 466900 28 92.9 33 ..........................AT ACCAGCGGCGGCGTGTAGCAGTCATCCGTGGGG 466961 28 100.0 33 ............................ TTTTCGTTTGCGGTTGAAGTCGGGAAGTATTAA 467022 28 100.0 33 ............................ CTTACGGAATCTATATTCTTTTTCCAGCTTTCC 467083 28 100.0 33 ............................ TATGACTAAGGTAACTAATGTAGAATATCCGTA 467144 28 100.0 33 ............................ TCGGGGTAACGCCTGGCTATAGTGCTGTTGCGG 467205 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 21 28 99.7 33 GTTTTCCCCGCACACGCGGGGGTGATCC # Left flank : TCCCCGCACACGCGGGGGTGATCCCTATGGGAACGACCGTTATTGCGGCCTTCAACCGTTTTCCCCGCACACGCGGGGGTGATCCTGTTGCACAAATTTGACGGCTGGAATTTGTGCAGTTTTCCCCGCACACGCGGGGGTGATCCTGGCTCCCGTTAGACTGTGTTCCGGCTGTAGTCGTTTTCCCCGCACACGCGGGGGTGATCCTTCTTGCTCCCTTTACGAAATCTTCAACCATAGGTTTTCCCCGCACACGCGGGGGTGATCCTTAAACTCAAAACTTGGGCTCTTAAACAGAAATGTTTTCCCCGCACACGCGGGGGTGATCCTTGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAATGTTTTCCCCGCACACGCGGGGGTGATCCTTGACAAGGAGAGCGGGTGCTTGGCGGCGCCCG # Right flank : CTCACGGTCGCAGAGGTATTCGCGCCAAAGGCAAGTTTTCCCCGCACACGCGGGGGTGATCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCCCGCACACGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGTTCCCCGCACACGCGGGGGTGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 4 468422-470707 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH590863.1 Stomatobaculum longum strain ACC2 supercont1.3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 468422 28 100.0 33 ............................ TTCTGCTGCGACCGAAAAGATAGGCTTGATTAT 468483 28 100.0 33 ............................ TAAATCGGAGAATGTTTCCTGGTAACTGTGTAA 468544 28 100.0 33 ............................ TTTCATTTTTTCATTTTGTCGCCATTAGGTAAC 468605 28 100.0 33 ............................ CCGGATTCATTGACGCAGGTGGTTGCTTCCACG 468666 28 100.0 33 ............................ TCACCATATGTTTAAAGTTGGTTGCCTTCAAAA 468727 28 100.0 33 ............................ TTTATTCAGCACTCGTTTTCTGTTAGTCATCAT 468788 28 100.0 33 ............................ TGAGCTTCTGATTAAGATTGAGAAGATAAACGA 468849 28 100.0 33 ............................ CACAGCGCCGCAAGCACGGCGCACACACGAAAG 468910 28 100.0 33 ............................ TTTGTGCAATACTCCGATATTGCTTTGTGTCCA 468971 28 100.0 33 ............................ TCGCGGTATGATAAGGCCATCACACAAACACAG 469032 28 100.0 33 ............................ TCCTGCGCGGTTTCGGTGGTGTCGCGTGTGTAT 469093 28 100.0 33 ............................ CCACACTCCGGACTGACTGAACTGCACACCGAG 469154 28 100.0 33 ............................ CCGCGAGTCGCTATAACCCTGTATATAGCTGCA 469215 28 100.0 33 ............................ TCAGCTCTACGCGGCTCACGCCAGCCCTTACAA 469276 28 100.0 33 ............................ CGACCACGGCGTGCGCCTCGACCGCAGCATGAT 469337 28 100.0 33 ............................ CACATGTGCTGCGGCTGACATCCAGCTAAAACG 469398 28 100.0 33 ............................ TTAACAAGCAGATCGGCTGGAGCCTTGAGGAGA 469459 28 100.0 33 ............................ TAATTGAATCCGGAAAACTCTTTTTTACAGCAT 469520 28 100.0 32 ............................ TAACATAGTCAACCATTTTTTCAAAAAAAAAA 469580 28 100.0 33 ............................ TTCAGTGTAAGTCTTGCCCCCTTTACGAAATCT 469641 28 100.0 33 ............................ CACGAAATGCAACACGAGAGATAAAAACCATTG 469702 28 100.0 33 ............................ TCGGTGAGAGACGCCTGCGAGGAGTATCTCCGG 469763 28 100.0 33 ............................ TGGTGAGGGTGATATGTGGCCTCGAGATGGAAA 469824 28 100.0 33 ............................ TCAGAGCTCTCAAAAATTTTCAGTTCCTGCATT 469885 28 100.0 33 ............................ TGGCAACGGGGCGAACCTCTGGGCGGGTTTCAG 469946 28 100.0 33 ............................ TAGTAACAGAAACAGGAACAGTAACAGAAACAG 470007 28 100.0 33 ............................ TTTCAGCGGGCAGAGTCGGAAAAGGCACGGCTG 470068 28 100.0 33 ............................ TAAGGAGGAATGCAGCAATGAAGATTACAGTCA 470129 28 100.0 33 ............................ TTTCAGCGGGCAGAGTCGGAAAAGGCACGGCTG 470190 28 100.0 33 ............................ GACGACATCGAGGAGGTGATGGATTTTGACATA 470251 28 100.0 33 ............................ CCATCATGGGGCATGGTAACGGCGTGAACCTCT 470312 28 100.0 33 ............................ TGCAATCAGCCATTTATACCCCCTCTCCGAGTA 470373 28 100.0 33 ............................ TTTCCGGATGCCACGGTGCGCCCGGTCTAAGAT 470434 28 92.9 33 ..........................AG GTGATAGCCGGAAAGCTGATTGAGCGCAATAAT 470495 28 100.0 33 ............................ TATCAGCACCGCGTACTGGGACGGCGAGCGCAT 470556 28 100.0 33 ............................ GGTTGTTGAATATCGACGAGGAAAGTAATAATA 470617 28 100.0 33 ............................ CCTACAAGGACAAGCGCTTCCACATTGAGTACA G [470634] 470679 28 85.7 0 .....................A.T..TG | A [470697] ========== ====== ====== ====== ============================ ================================= ================== 38 28 99.4 33 GTTTTCCCCGCACACGCGGGGGTGATCC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCGACCATGCACAACCCCCTTTCTTAAA # Right flank : GATTATGGGCATATGCTCAGGCGGGTGATTGCGTTTCAGAGCGCTGTAAGATAAATGCTAAAAATGTAACTGTAGCCGCTAAAATTGATTTACATACGCATCAACGTGAAGTATACTAAAAGCAGTAACAGATTTTTGTTACAATTAATTGGCTCTTGGTGCTAAGCCTCCCAACTATATGGGAAGTGCTGATACCTAGAGCCTTTTTGTATTTAGGAGGGCGCATGAAAACAGCTATCTTGGTCGATGGAGGGTTTTACAGAAAACGCTCCAGTTATCTCTGAGGGCGGAAGACGCCCAGCGCAAGGGCATCAGAGCTCTACCGGTACTGCCTGCAACATCTTGAGTACGAACGTAAATTTGACATGTCGAGAAGCCTGTATCGGATTTTCTATTATGACTGTCCGCCACTGGCAAAGACTGTTTACCACCCTATGCAGAAGCGCGGAATTGACTTCCGGCAATCTGATACATTCAAATGGATGAATGTTTTTCTTGAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCCCGCACACGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGTTCCCCGCACACGCGGGGGTGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 5 472789-473059 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH590863.1 Stomatobaculum longum strain ACC2 supercont1.3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 472789 28 96.4 33 .......T.................... CAAAACCTAAAGCCATCAGAGGAAGCGCTTCTG 472850 28 100.0 33 ............................ GCGGGCTCCGTCAAAAGGGACGCAGGTCGCCGC 472911 28 92.9 33 ............TG.............. GTACTCTGTAAGCGCTTGGTAGGTTTCGTCACC 472972 28 89.3 33 C......T....T............... GTCGATAGTGCCGTTTGTGGATAACTTCCCAAA 473033 27 96.4 0 ......................-..... | ========== ====== ====== ====== ============================ ================================= ================== 5 28 95.0 33 GTTTTCCCCGCACACGCGGGGGTGATCC # Left flank : TGATTTTTCTGAGGTGCTTCAGGAGGCGTTGAAGGAGCGGCTCGGAATAGAGGCATAAAAAAGAGCCCCCGAAGGGCTCTTACTTGTATTGTGCCACGGAGAGCATGAATACAGTAGGATATGTCACGGGAAGTGTGGTGATGTTAAACGATCACACGCGAAGCATAAAACTACTTATATGCGCGGTTTTCCGGTATTTGGACACGGGTTCGACTCCCGTCATCTCCATGCGTTGATTGCGCGCCGGTTTACCCGAAAGACTTTTTTGCTTTGTTTGGATATGGACCAAACAGAAGTGCTGATTGAGTCTGAAATTTTGGACAGATAATGTGATAGACTTAGTACATAGAAAAGTTGTGGAATTTTCCTATACGTGCGGGGGGATCCTCAAATTGGATTACATTTGAGAAGGGGGCGATTTTGTGTTTATGGTCGTCTTACTTGCCATTGTAATGGTACCATTTGGTGTTCTAGCAGAGTTAGTGAAAAGAACAAAGTAA # Right flank : CTAGAGTCATAGAGTTAAAGGAGCGCGGAGAATATGAGAGAACTGACAAACGATGAATGGGAGTATATAGTTTCGAGAGTTCTGCGAAACGCCAAAGACGCGGCAGAAGAGGCGAGACAACTGCCCTATAGGGAATACAAGGCGGGACGGGCTCTCGCGTATTATGAAGCGCTGGATACAATAAAAAATGAGCTTCTGGCCCGCGACGCGGACGTGAGAAAGTTCGGACTTGATATCAATTTGAATGAGCTACTATCTTCGCACGGCGAAGCTCATAATGGATAACTCTGGTAATTTATCTGGGCCACAGCAACACCAACTGAATAACAGTAACGTCAGCACAGTTTTCCCCGCATGCGCGGGGGTGATCCCCCGTTGTACATAGAGACTAAGAGCCACCGGGTGTTATTGCCGCACACACGAAGGGAATCCGGCGCGTACAAAGTCAAATAGGCCATCTTAGGAGTTTCCCCAACATCCGCTTTCGTTTTATAGAAAGC # Questionable array : NO Score: 3.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:-1.5, 6:0.25, 7:0.01, 8:0.8, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCCCGCACACGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGTTCCCCGCACACGCGGGGGTGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //