Array 1 54390-53104 **** Predicted by CRISPRDetect 2.4 *** >NZ_MPIX01000009.1 Campylobacter coli strain VA46 Contig_15, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 54389 36 100.0 30 .................................... GAAAAAGGTTTAATTGAAGTTGAAGACAAT 54323 36 100.0 30 .................................... TGCGATAATCGGGGTGCGGGGGCGTGAAGT 54257 36 100.0 30 .................................... AATAACTTTGCAATGCTTTACGCACTGGGT 54191 36 100.0 30 .................................... TTTAAACGACTTAGAAGCAATTTTTCAGGA 54125 36 100.0 30 .................................... TGAAACATATTTAAGCAAAAAAAGCAATTT 54059 36 100.0 30 .................................... TTACTATTAGGTAGACCAGTATTTACTAAT 53993 36 100.0 30 .................................... CCGATGAAGTTATAAATTCTCGTGATGAGT 53927 36 100.0 29 .................................... CATATTCAATGTTTGTTGTGTCATTTTTT 53862 36 100.0 30 .................................... ATTTTTTCTATTTTCTCCCTTTTATTAGGA 53796 36 100.0 30 .................................... TGTGATAATGAAATTATCCATCCGTTTATT 53730 36 100.0 30 .................................... CTAAAATAGGTTGAATTTTAATTGCTCTAT 53664 36 100.0 29 .................................... CTAGATAAGCTTGACCGTATTTTGTTTGA 53599 36 100.0 29 .................................... TTTTCATTAATATCATCACCTTTATTATC 53534 36 100.0 30 .................................... ATTTGATAGCTTTTGCAAGATACATTTCCT 53468 36 100.0 30 .................................... CATATTCATATGTTGCGTGTGGGCTTCTGT 53402 36 100.0 30 .................................... TGAATTTTTAAATGAAGTATTGCTTTTTAA 53336 36 100.0 30 .................................... ATTACGACTTGCAAAGGTGTAAATCCTGTA 53270 36 100.0 29 .................................... TGCAAACGATAATCTATCGCAAGAGGAAA 53205 36 100.0 30 .................................... AAAGGATTATAAAATCCATAAAGTAAAGTT 53139 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 20 36 100.0 30 GTTTTAGTCTCTTTTTAAATTTCTTTATGGTAAAAT # Left flank : AAGAATATCACAAGCTTCTTTTATATCTAATTCACAAGCTTTTTCATAGTATTGTTTAGCTTTAGAATAATTACCTTGTTTATGTTGTTCTTTTCCAAGATCAAAATAATTATCATTTGAATAAACGCAAACAGGTATTAAAGTAAATACAAATATGAAATATTTCATTACCATCAATTTTCCTTTTAAAGCTATATTATTTGAAATTTTTATATTCTTTACAATCATATTCATCTCCTAATTCACAAGATTTTTCATAATTAATTCTTGCTGTTTGGCAATCTCTTTCGATGTACTTACACTTCTTTAATAAAATAACCATCGTTCGAAAATACATTTGTTGTTAATAAAATTAAGAACTAATATATTTAATTTTATTTGTTGCCTTTTATAATTAATTGTTAATTATAGCATAAATTATAATTTACAATTGATAATATGTTATGTAAAAATTAAAGTTTGAAAAAATTTATTTTTTCAAATTCCAAAAGCGACATATT # Right flank : GGACTTTGAACAAATAAAGAAAAATAGAGCTTTTTGTATACAAAAATGTATAAAAATATGCTATCATTTTAAAAGAGAAATTTAAAAAGAGACTAAAATAAGTGGTTTTCGGTTAGCCACGCAGGGTTACAATCCCTTTAAAACCGTTAAAATTCAAACAAACTAGCTTGTCTAATTTTATTAGACTTAGTTTTGTTTTCTTTGTATATCTTGTCATTGCTGTATTTAAAATCTTGTGTTTTTTCATCGAATTCAAAAAGAACTAAATTTTTATCATCATTCATTTTTTCATTAAAAGAAACTCCGCCTAAAAGTATTTGCATATTGTCAAATTGTTTTTCAGTTATGGTTAATACTCTTATATTGCCACAAGGGGGTAAAATTCTTTCTACGGATTTGATTGCTGTTTTAGCCGAAGTCATTCCTTTGCAAATTTTAACATATACGCTAAATTGCATCACAAAAAAGCCAAGTTTTACAAGCGAAACTCTAAATTTATT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTCTCTTTTTAAATTTCTTTATGGTAAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.56%AT] # Reference repeat match prediction: R [matched GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [78.3-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //