Array 1 11302-16455 **** Predicted by CRISPRDetect 2.4 *** >NZ_JXAZ01000020.1 Ralstonia solanacearum strain CFBP6783 Contig_20, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 11302 29 100.0 32 ............................. GCTCATCGCCTCCCCAGGCTTCGCGTTGTGCA 11363 29 100.0 32 ............................. AGAGGGGGTGTTTGCCTGTGGCGCAAGGTGGA 11424 29 100.0 32 ............................. CCCTTGTGACGATGCGTCTCCAGTTCCGACAC 11485 29 100.0 32 ............................. CTGGAACGACGGCAGCTAAAGCGCTAGAAGCC 11546 29 100.0 32 ............................. ACGACGTAGCCGACGTGACCGAGTAGGTCGGG 11607 29 100.0 32 ............................. GCACGCGCGGGGATCACGAGAGCATCGTGAAC 11668 29 100.0 32 ............................. CTTGGCCTCTTGGGCCCTCACCATGATCCTAG 11729 29 100.0 32 ............................. CCATCAGCGAGCAGGTGGCGAACAGCACGTAG 11790 29 100.0 32 ............................. TTGAGCGGCATTTTCTGCCAGAGACATGATTT 11851 29 100.0 32 ............................. ACTTGATTGCTGTCGTGAGCGGGTTCGTGTCA 11912 29 100.0 32 ............................. AGGAGATTAAAAATGCTACTGATTGCCGAAAT 11973 29 100.0 32 ............................. CACGTAACATCAGGAAGCCTGTATCTGGGTCA 12034 29 100.0 32 ............................. AGCCTCATGTCTGCCGAATTGAGGTGAAGGGC 12095 29 96.6 32 ............................T ACAAGAACGTCAAGGTGACGACCGAGGCCGGA 12156 29 100.0 32 ............................. ACCACTCACCGGTCTTCACGTCCGTCATGGGC 12217 29 100.0 32 ............................. AGCTGCGCCGCTTACGTCTTTGGCTCCAGTCC 12278 29 100.0 32 ............................. CCGTCAAAGCTGGCCGAGTAACGGCCATCGGT 12339 29 100.0 32 ............................. TCGCAAGGCAGACCCAAAAACTACAATGGCAC 12400 29 100.0 32 ............................. TCGCTGGGCAGGGTACGCCGACTTACATCGCC 12461 29 100.0 32 ............................. CAGGGCTATTCACCCTCGCACGACATGACTCG 12522 29 100.0 32 ............................. AGAGCCTGCTGCAATGGGTATGCGACACGCTC 12583 29 100.0 32 ............................. CCCACCCTCGATATCAGCCCTATTGACCGCAC 12644 29 100.0 32 ............................. CACGGTCGCCACATCGCGGGCCACGAACCACG 12705 29 100.0 32 ............................. CATCCAGGCTCGTTTGGCGGCCAACATTCACG 12766 29 100.0 32 ............................. GAGTTCCTGCATACGGCCTCCAGACGAAAATC 12827 29 100.0 32 ............................. TCAATCGCGCGGCTGTCCACAGGCCGGCGATC 12888 29 100.0 32 ............................. ATCAGGGTAGTCGCCCTGGAAGCCCACGGGTA 12949 29 100.0 33 ............................. TTGGGAGCAGTGCCTGCCGTAGTAAATGCGGTA 13011 29 100.0 32 ............................. ATTTCTGACTTCAAAGAGAAAAAAATCCTCAC 13072 29 100.0 32 ............................. CACGAAACGGCAACCAGGGTGCAGGGGCTCCG 13133 29 100.0 32 ............................. CTCGTTTGGCGGCCAACATTCACGGCGGCTCG 13194 29 100.0 33 ............................. GATGGATTGCACAAACTGACGACGACTCTCGCG 13256 29 100.0 32 ............................. GAAAGGTTTAAGGGCCGGTTGTGGGTTGATTC 13317 29 100.0 32 ............................. TCGGCTAGTTTCTGGTAGCCACTGCCTATGGC 13378 29 100.0 32 ............................. TCATTCAAACTGACTGCTCCTAACAGCAGAAC 13439 29 100.0 32 ............................. ATCATCAAGTCGCTCTGTGCCCGCAGGCAAGG 13500 29 100.0 32 ............................. TCAAATTCATCCCGCGTGGAGGTGCTCCAGCC 13561 29 100.0 32 ............................. CGTCACAATCACTGTGCCGCCGCTGATGGTGC 13622 29 100.0 32 ............................. ATCGCGCTATCGACGCTCGTTGCATCGCTCAA 13683 29 100.0 32 ............................. ATACGACGTGCCTCTGAGTTTGCGGATGCCCT 13744 29 96.6 32 ............................A ACTCGCCACCCAATGGCGGCTGCAACACTATA 13805 29 100.0 32 ............................. CGTAAATCCCATGTCTCTTTGAGGCGATGTTG 13866 29 100.0 32 ............................. GAGGTCACCAGATGCGCCATTACGGTCCTGAA 13927 29 100.0 32 ............................. CCATCTCACGGTATTATCCTTAACGCCAAGCT 13988 29 100.0 32 ............................. CCAATATGCAGCAGATGCGGCCAAACTATTGG 14049 29 100.0 32 ............................. CCCGCGCCCTTGCCGTAGGCGCCCCAGTTGGC 14110 29 100.0 32 ............................. GCGGCGTTCAGACTGCGCTATCTCCCTACGAA 14171 29 100.0 32 ............................. TTTCTGATAAAACCACGGTTCTATGCATCCCC 14232 29 100.0 32 ............................. TAGGAGCGGCGTAATAACTGCATCTCGCGCCC 14293 29 100.0 32 ............................. GGTTGCTGTTGTGTGGCTGTATTGCCCATATC 14354 29 100.0 33 ............................. TCTGCGGCCTTGAACAGCAGATCACCGGCTACC 14416 29 100.0 32 ............................. CCTCCCCTCGTCATCGGCAAGAGTCCACATCT 14477 29 100.0 32 ............................. GTCCTACCGTTCCCTCCCTGCTCCCCAATGGT 14538 29 100.0 32 ............................. CTGCTCGTCGAAACGGCCCGCCTGTCGCCGAA 14599 29 100.0 32 ............................. ATCGGCGTGTTCACGCCGGAGCACAAGCAGCT 14660 29 100.0 32 ............................. CCAGTACGGCGCCTGGGGTGCTCGTCGCAACT 14721 29 100.0 32 ............................. GTCACGACCTGCACGGTCTCGAAGGACGCGGC 14782 29 100.0 32 ............................. TGATCCTAGGCCGCTGCCAGAACCACCCTCAC 14843 29 100.0 32 ............................. CCAGCTCCCTTGCCGTAGGCGCCCCAGTTGGC 14904 29 100.0 32 ............................. CGGGCCGGCCACGACAAGGCTATGTTGGATGC 14965 29 100.0 32 ............................. CGCCATCGACCGGCAGCGTCTTGATGCTCGGC 15026 29 100.0 32 ............................. AGCAGGACATGCAGCAGAAGATGGCTCAGATG 15087 29 100.0 32 ............................. CTGCCGGGCACGCTGTACATGGCGCGCTACCC 15148 29 100.0 32 ............................. ATGACCACGTGGTTGAACGGCTAACGTCAAAC 15209 29 100.0 32 ............................. TCGACCATCGCAAAGAAGGGTTTCGACAAACC 15270 29 100.0 32 ............................. ACATGAATGGCATTTTGAACATGCTGTCTGCT 15331 29 100.0 32 ............................. TCCTCGTTGGTGCCGCTCTCTTCCTCGTGGTC 15392 29 100.0 32 ............................. CCAATCACCAACCGGCGCGGGGTTGGTGCGCC 15453 29 100.0 32 ............................. AAATATCTGAAGCAACTGGGCCTGGGTGCTGC 15514 29 100.0 32 ............................. ACGATGCGGCCGGGCATGGTTCATCGAATGAC 15575 29 100.0 32 ............................. GTCGGCAAGCTGCCGTTCGGCGAGGACATGTT 15636 29 100.0 32 ............................. AGATCAAACTGTGCCATGCCCTGGGAGGTTTG 15697 29 100.0 32 ............................. TGTTGACATTAGGGGAGTGGCCGGGAGCTGAT 15758 29 100.0 32 ............................. CTCGCTTTGAACATGTGGGAGAGCGAACGCAG 15819 29 100.0 32 ............................. CCGCCTAATCCAGGCGATGCGATCCATACCCC 15880 29 100.0 32 ............................. TACTTGATCGATACTGACCAGCTCTAGCCTCG 15941 29 100.0 32 ............................. CCTTTTCCGATACGGGCAGCTAGTGAAAAATG 16002 29 100.0 32 ............................. CAGCAGCTAGTGCAGGTGCCGGGGACGTTCAT 16063 29 100.0 32 ............................. GCTTCATATTCATCGGCGGGGTGCATGTCTTC 16124 29 96.6 32 ........T.................... GCGCTGGCGAAGGGTCAGTCGCAGCCGGTCAC 16185 29 96.6 32 ............C................ CGCCTGAAGCACGGCGGCAATGCGGTGCTGCG 16246 29 96.6 32 ......T...................... ACGGGTTGGGCACCGCTGTATGAACACTGGCT 16307 29 93.1 32 .............A..T............ GGTGCGGGCGAGTTCGCGCTGCCGGGCCTGTC 16368 29 79.3 30 ..A........TCA..........TG... CTGCGCCAACAGCTTACCGTTGATCGTGCC 16427 29 75.9 0 .C..C......A..T........C.G..T | ========== ====== ====== ====== ============================= ================================= ================== 85 29 99.2 32 GTGTTCCCCGCGTGGGCGGGGATGAACCG # Left flank : CGTGCGGCAGTATCCGCAGTACGAGCGCATCGGCCTGCGCGAGCTGTGCGACGGCATCCACAGCGTCTACAAGGCCAACGACGTGGCCCGCGTGACCACCGAGATGTACCTCTCCAACATGGAGCCGGCGATGAAGCCGTCGGACGCGTGGGCCAAGATGGCGCACCGCGAGACCGAGCGCGTGGCGATCGACGACCTGGAAGGCCGCATCACCGCCATCCTGCTGACGCCGTATCCGCCGGGCATTCCGCTGCTGATCCCGGGCGAGCGCTTCAACAGGACGATCGTGCAGTACCTGCAGTTCGCGCGCGACTTCAACAAGCTGTTCCCGGGCTTCGAGACCGATATCCACGGGCTGGTCGAGGAGGAGATCGACGATAAGGTGGGGTACTTCGTCGACTGCGTGCGGTAAGGCATTGCCGCGAGCTTTTGCCCGGCGGTAGATCGGTAGATTTTTGAGAGCCGTTTTTTTGCTTTTGGATCAAGGGCTTGCGGTAAGT # Right flank : TTCAGCCAGCCCCATTTCCTCGATCGTTTGCAGGAAGATGAAGAACGTTCATGGACTAACGCCTTTGCTATCTCATTTGGATCATTTTTATATTTGCTGAAGCTGTCAGGAAAATCCAAAATAAATGTCCACCGGGCTGTTGTGATCGCCCGTCCGGGAGCGAGAAAAGATAGAAATTTCCTGACATCAAGAAAAGGCATCAGGCTGATATGGAAAAAGGGGCGGCGCGATACTTTGCTTATTGGGGCAAGGCACGCATGCAGGAAGGTGCCAGTCAGCTTTATCACCTCCTTGTCTTTCATGCATTGGATGTCGCCGCTTGCGGCGCGGAGTTGCTGCGCCTGCCCCGGTTTTCTCTTGCGCCCCTGGCTGCGGAACTCGGTTGGCCATTGCGGATTGTCGAAAAGATATTCATCTGGTTTCTGGCGCTGCACGATCTTGGCAAGTTTGCGCGCGCTTTTCAAAATCTGGCGCCGGGGTTATCGACCGATCTCGTCTCC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGTGGGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGTGGGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.60,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-18] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 25382-31270 **** Predicted by CRISPRDetect 2.4 *** >NZ_JXAZ01000020.1 Ralstonia solanacearum strain CFBP6783 Contig_20, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 25382 29 100.0 32 ............................. TCGTCGTGCTACCACTCGACGCAGTCGGAGAC 25443 29 100.0 32 ............................. GCTTCAACGATCCTGTGGCGCGAAGATTCAGG 25504 29 100.0 32 ............................. CCATGCCCCTGGGGCTGTTCCTGATCCTGGTT 25565 29 100.0 32 ............................. GTCGAAGTTCATGATGGGTCAACTCCTGTGCG 25626 29 100.0 32 ............................. GCATGGGCCGAAAACTTGACTTCACCTCGGTG 25687 29 100.0 32 ............................. TCATTTGAAATCCGCATTTAGAGATAGAACAC 25748 29 100.0 32 ............................. CCGGTTTAGCCGCGCCAGCTCGCCCTCTGATC 25809 29 100.0 32 ............................. ACGATGTCGGCGGGCGATGTGGTGCGTTTGTC 25870 29 100.0 32 ............................. TCACGTGCAGCCTCCATGTGGATGTTTTCGAT 25931 29 100.0 32 ............................. GTATTAATCAGGGGTAGGCTAGATGGTGCTCA 25992 29 100.0 32 ............................. ATCTCTGGGAGGTTGAGCCAGAATACAGCCCA 26053 29 100.0 32 ............................. GAACGCGCGTATTTCGCCTAACCCAAACCTCA 26114 29 100.0 32 ............................. ATTGCCCTCACATTGGGCATGCGGCGAAATTA 26175 29 100.0 32 ............................. TCATGCCCGTCCTGCTGGCGGCCAACGACGGA 26236 29 100.0 32 ............................. CACGCCAATCGCATTTGGCAGAATTGACCAAT 26297 29 100.0 32 ............................. TTCACTGTGCCCGGCTGCTGGCGCTGCCATGC 26358 29 100.0 32 ............................. TCAAATGCGATCCCGGCATGCGGAGGGTGGTG 26419 29 100.0 32 ............................. GCGTGCAGTGGGTCGCCGGCCTGTGGATGGCC 26480 29 100.0 32 ............................. CCTAAATTGGGCACCTCGATGCTGCGCCTCCA 26541 29 100.0 32 ............................. AACCCTGCATCTGCGATGGCGCGTGCGAGCTT 26602 29 100.0 33 ............................. AATAGACCGGCGCCATGCTGTTCTGGCTCAGCC 26664 29 100.0 32 ............................. GGCGACGAGATTTGGGCAATCGCTCGGATCTA 26725 29 100.0 32 ............................. CCGAGTCTGCAACAAAAACAACCGGTGACGTA 26786 29 100.0 32 ............................. ACCGCTCGGTACTCAGTTGATGCGGCGGAGAG 26847 29 100.0 32 ............................. CCGTGGCTAAATCATTCGAAATCATCAATCCT 26908 29 100.0 32 ............................. CCGATGAATGAAATCGGCGCTCCTGGCATGAC 26969 29 96.6 32 ............................T AAAGCGGGAATCAGATGGTGTGTGGCTTAGGC 27030 29 100.0 32 ............................. ATTTGACTAGGATCATAGTGAAGGCCCAAGAG 27091 29 100.0 32 ............................. ATCATGCCATGATGAAGTATTTCTGAATTCAA 27152 29 100.0 32 ............................. TCAATTCTCACATCAGAACCTAGCGGATGCGG 27213 29 100.0 32 ............................. ACCGCCTCTTGCGCTTCGGTTCGGAATTGGTT 27274 29 100.0 32 ............................. CCTGTCAGGTTCCACGTCTTCCGCAGAGTGGA 27335 29 100.0 32 ............................. CGCTATCGAATCGATCTGAGCCCCGTAGAGCG 27396 29 100.0 32 ............................. CGCGCGGTGCATTCGGATGTGACGGATGTAGA 27457 29 100.0 32 ............................. CCGGCTCCCTTGCCGTAGGCGCCCCAGTTGGC 27518 29 100.0 32 ............................. CTGACCGCCGAGGATGTCATCCAGCGCGTGCA 27579 29 100.0 32 ............................. GTAGGGCAGCGCTCCGGATAAGGCAATGGACT 27640 29 100.0 32 ............................. CCCGCGATTGCGGGCTCATTAATTCATTGCGG 27701 29 100.0 32 ............................. AACGACGTGGCCAGGCAGTAGACCGCAAAGCA 27762 29 100.0 32 ............................. CTGAGCGGCATTTTCTGCCAAAAACCAGAATT 27823 29 100.0 32 ............................. ACCGCACGCGTGCAGGCGCAATTTGACTACGC 27884 29 100.0 32 ............................. ATCAGGCGATGATTTTGTTTCGTGATGCTGTC 27945 29 100.0 32 ............................. GCGTGGGCCCGCGTTGATATCAGCAACGATGA 28006 29 100.0 32 ............................. TCATGCCCCTGGGGCTGTTCCTGATCCTGGTT 28067 29 100.0 32 ............................. TCAGCTAGTTTCTGGTAGCCACTGCCTATGGC 28128 29 100.0 32 ............................. TCGATCAAGCAGCACGCCTGGTTGGGCTAGCA 28189 29 100.0 33 ............................. GAGGTCACCAGATGCGCCATTACGGTCCTGAAC 28251 29 100.0 32 ............................. GATTGACCCAGCCAGGCTCTGAAAACTAAGTT 28312 29 100.0 32 ............................. CGTGTCGCCGATATTGCGGGAAGCCATGTTGC 28373 29 100.0 32 ............................. CGACTGGCCAACGAAACCGCCGCTTGCATCAC 28434 29 100.0 32 ............................. GGTTATCGGACCAGTTGATCTTCACGACTATG 28495 29 100.0 32 ............................. AATAGGCCGCCATCACTGACCGAGGCCGTCGA 28556 29 100.0 32 ............................. ATCGATAACGACACGCGCAATGTCTTTTTCTA 28617 29 100.0 32 ............................. AAAATAAACCCGAATAGATCCGAACAGGAAAA 28678 29 100.0 32 ............................. CCAACTCAACAGCGGGAGGCCGCATGACTCAC 28739 29 100.0 32 ............................. CCATAAGGCAATGTGTCGTGTTCGCAGAGGTC 28800 29 100.0 32 ............................. GCTGCGTGTCCGGAGCATCTTTCGGATAGCGG 28861 29 100.0 32 ............................. CTGCTGCCAATCATAGTCCAACCGCGCGCCCT 28922 29 100.0 32 ............................. TCTGCGGGGCGGATGCATGGCGCGGCTGTGCT 28983 29 100.0 32 ............................. ATAAATTCTCCCGATACGTGGCGGCGATTCGG 29044 29 100.0 32 ............................. TCGTTCGAGGGCGTCGACATCGTTTGGTGCGA 29105 29 100.0 32 ............................. CCGGTGCATACGTTTTGGGACTTGGGCCGCGC 29166 29 100.0 32 ............................. CAACTTCGGCGTGTTCTCGATGACGCGCACAA 29227 29 100.0 32 ............................. ACGCTGCCGGTCGATGGCGCGGCGGATGTGGA 29288 29 100.0 32 ............................. TGCTGCCGCAATTCTCATCGCCTGGCTCTGTC 29349 29 100.0 32 ............................. ACGTTCCGCAGCAGAATGCGGCAACGATGATG 29410 29 100.0 32 ............................. CGTTTGTGTATTACTCATGTCATGACATCCAG 29471 29 100.0 32 ............................. TTTTGAGGCGGTTTCAATTGATAAATCCATTA 29532 29 100.0 32 ............................. CAACCGACGCAAATGGGATCGCACGCGATATG 29593 29 100.0 32 ............................. GGCAGCTCGCTCAGTCTGTATCCGCCATTATC 29654 29 100.0 32 ............................. TACGGCGTGGGCGTCTGGCAGCAGCAGAACGC 29715 29 100.0 33 ............................. TTCTACCTACTGTTCGTCTTGCCGGTTGTCGTC 29777 29 100.0 32 ............................. CTGGACGGGTTCATCCAATTTTTCCGGCAGCA 29838 29 100.0 32 ............................. ACGCTGCGGCCGGGCATGGTTCATCGAATGAC 29899 29 100.0 32 ............................. GCGCGGTTGATGGTCGAGTGGTACGACGAATC 29960 29 100.0 32 ............................. TTCCTGCAGCGTGCTGGCAGCGGCGAATGTGT 30021 29 100.0 32 ............................. CCGTTGGGCGTCGTCATTGTGTCGGGGTACAT 30082 29 100.0 32 ............................. AATTTTTCTTTCCGCTGAGGATTTCCTGATAC 30143 29 100.0 32 ............................. TCGTCGCCCGTTGTCCATCCCATCACCGGCCC 30204 29 100.0 32 ............................. CGGCCTCGTGAAAACCTCGCTGTATCGCTTCC 30265 29 100.0 32 ............................. ACTGTTCGTCCGAGCCCGCCCGGAACTGCCCA 30326 29 100.0 32 ............................. TGATCGGTCGGCGGGGGTTCCCCGTGGGTTGA 30387 29 100.0 32 ............................. CAACGCATCGAGCCCTGTGAAGGTCACGAAGC 30448 29 100.0 32 ............................. CGAGAGGAACCAATAGCGACTACTGGGTGGCC 30509 29 100.0 32 ............................. GAGGAGAGATGGGTAAGGAGCTGCAGAAACTG 30570 29 100.0 32 ............................. CGCGACACCCCGGCGATACAGGGGTGACTCTG 30631 29 96.6 33 ............................T TGCGGGCTGGCCGACAACATGTACGGTTGCAGA 30693 29 100.0 32 ............................. GTCGGCGTCTAAGCCCCTGCCGCGCAAGGCGT 30754 29 100.0 32 ............................. ACACTGCGCCAGCACCGCCCCCCGATTCCACC 30815 29 100.0 32 ............................. GACTTGAACACCGAGGCCTGGGCCCAGGTCAA 30876 29 100.0 32 ............................. CCCTGCCTCAACATCTTCAGCGCTGTAGTACT 30937 29 100.0 32 ............................. GCTGTGCTGCTCGCGGCCTAGCAACTCCGGTC 30998 29 96.6 32 .................A........... CGAGCGAGGTGGGCCTTGTTGACCTGGCCGAG 31059 29 86.2 32 ............TT....A.......T.. GTTCAGGAGTCGAGCGACTTCCTGTCCCGCAT 31120 29 96.6 32 ............T................ ATGAGCGGGTTACCCGTCGCGGCGGCTTTTAT 31181 29 79.3 32 ........T...TAC.........C..T. CCCGGCGCCGGCGGGCTGAGCGGTGTGAGCCT 31242 29 93.1 0 ........................CT... | ========== ====== ====== ====== ============================= ================================= ================== 97 29 99.4 32 GTGTTCCCCGCGCCTGCGGGGATGAACCG # Left flank : TCGCATCATCCCGGCCATCGAGGAGGCGCTCTCGGCGGGCGGGATCTCGCCCCCGGACGCACCCCCGGAATCCGTGCCGCCCGCCATTCCCAATGCCGAGAGCCTTGGCGACGCTGGCCACAGGGTGCAGGGATGAGCTTTATTGTGGTCGTCACCGAAGATGTCCCCCCGCGCTTGCGCGGACGGCTCGCCATCTGGTTGCTGGAGGTGCGCGCCGGTGTGTACATCGGCGACGTCTCCCGGCGCACGCGCGAAATGCTCTGGGAGCAACTGGTCGAAGGGCGTGAAGACGGCAACGTCGTCATGGCCTGGGCCAGCCCGCACGAATCGGGCTACGAATTCCAGACACTGGGCGCCAATCGCCGGTTTCCAGTCGAATTCGACGGACTGCAGCTCGTGGCCTTTCAGCCGGCGGATAAACCTGCTCTTTGACAACGCGAATAATCGGTACGTTTTGGGCGGTGGAATTTTTGGTTATTAATCAATGGGTTGTGTTAAGT # Right flank : GCCAGTGGCCATCCAGCCGATGTCACGACCCGGATGCCGCTACACACTAGTGCCAGCTTGACCGCGCCTTCCAGCCGTTCCTGCACAGAGGCAAGGACACAGCGCGTCCGGGCCGCAGGGTTGGATCAGTCCGCCAGCGCTGCGCGCGCAGCCGCAATCGCCAGCTTCACCTGCTCCGGCGCCGTCCCGCCGATATGGTTGCGCGATGCCACCGAGCCCTCCAGCGTCAGCACGGCGTGCACATCGTCGCTGATCAGGTCTGCCTTGTCGCCCAGGCCGCTGATTTCGCGCAGCTGCGCTACCGACAGGTCGGCCAGGTCGCAGCGCAGGTCGTCGCAGGCGCGCACGGCGTGGGCCACGGCTTCGTGCGCGTCGCGGAAGGGCAGGCCGCGCTTGACCAGGTAGTCGGCCAGGTCGGTGGCGGTGGCGTAGCCCTGCAGCGCGGCGGCCCGCATGGCGTCGGCCTTGACCGTGATGCCGGGCACCATGTCGGCGAAGAT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCTGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCTGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //