Array 1 2660615-2659085 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP013210.1 Empedobacter brevis strain BCLYD2 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================================ ============================== ================== 2660614 48 100.0 30 ................................................ CAACCGGGCGACGTTAAAGTTTATGCAAAA 2660536 48 100.0 30 ................................................ ACCAATGTTAAGGTTTCACAAATACAACAA 2660458 48 100.0 30 ................................................ ATACAACCAATTGCAAACTATAATATTACA 2660380 48 100.0 30 ................................................ AATATTATTCTTTGTTAAAATGTAGGTTAA 2660302 48 100.0 30 ................................................ AAGATTGATAAACTTCTTCTTCATTTTTAG 2660224 48 100.0 30 ................................................ CACTCAATCAACGCTTGTTGCAAATCGTAA 2660146 48 100.0 30 ................................................ ACTCTTTCTTGGTTGTACGTTGCATTAAGC 2660068 48 100.0 30 ................................................ GCATTCCAACTATTGGCTATGGTGCAACGT 2659990 48 100.0 30 ................................................ CGGAAACTTCAACAAATGCAATTGCTACTA 2659912 48 100.0 30 ................................................ GGTGATTCTTCATTAAACATATTCATTTGA 2659834 48 100.0 30 ................................................ GGTTTATGCCGGACATATTATTGTTAGAGA 2659756 48 100.0 30 ................................................ TATTGGTTCAATTCCAAAAAAGGGTTGCAG 2659678 48 100.0 30 ................................................ ACCATTGTGTTTGTATTTAATTATTAATAT 2659600 48 100.0 30 ................................................ AAACATCGGAAGTGTTACTGTAAAAAGTCG 2659522 48 100.0 30 ................................................ GCCGCACTACGAATTAAAAAACTAATGATA 2659444 48 100.0 30 ................................................ TATAACCCTTCTTCGCTTACGCTGGCAACG 2659366 48 100.0 30 ................................................ AGGATTCGTTGAGTTTTGTCTCTTAAACAA 2659288 48 100.0 30 ................................................ AAACATCGGAAGTGTTACTGTAAAAAGTCG 2659210 48 100.0 30 ................................................ ACATTCAGATATATTCCATTTAGTTCCCCA 2659132 48 100.0 0 ................................................ | ========== ====== ====== ====== ================================================ ============================== ================== 20 48 100.0 30 GTTGTAACTACTTACGTAAAATTACTAAAAGTGAAAGGAACTCACAAC # Left flank : AAGTGTATGATAGGAGAGCAACGAGTAATTCGCTTTCCGGAAATGATATGAGTTTTATTCGCTATAATGCGTATCGAATTATGTGGGTGTTAGTTTTGTTTGATCTACCAACAGAAACCAAAAAACAAAGAAGTCAAGCAACTCGATTTAGAAAAGAATTGATGGATGATGGGTTTGTGATGTTCCAATTTTCTATTTATTTAAGACATTGTCCCAGTAAAGAGAATGCAGAAGTACATATAAAACGGGTTAAGTCAAAACTACCCGAATTTGGGAAGGTAGGTATTATTTGTATTACAGATAAACAATTTGGTCAAATGGAATTATTCTTTTCGAAAAAAGAAACCGATTTACCAACAGGTCCACAACAATTGGAATTATTTTAATAAAGTAGGATAAAAAAATCCAATAGAAATAAACTTATTCTATCGGATTTTTCTTTTTTTCTCATTTCTAAATTTCTTCTTAAATCCTTTTCTATAAAGGACTCTTAGAATGAG # Right flank : ACAGAGGTAACAATTAACAACACTTATAATCTTCTAATACTCTGAGAAAAAAAGCCCCGCAGATAGGCGAGGCTCTAAATGTTTTTTGTAAAAAATAAAGAATGAGGTTGATATTTTCTACAGTTTAGAAATAATAAAATTAAATTATAGGAGAAGCATTTTACGGGAAAACGTAAAATTAACTATTTGCTTAATGCTATATTGCAATCTATGGATATAGAAACGAAAGAACTATTAATAAGAATTTATAGATGGAGTTCTGAGCAAATTGACCTTGCTTTACGTGCAAAATGTAAATGCGAATATTGTGATAAAGATATGTTTGAATCAGCAGATAATTATAAATTATGGGAAGTAGATCATATTATTCCAAAATCTTCTCAAATTGAAGGGTTTGACTATAATAGTTTTGATAATTTAGCTATTGCATGTAAGCAATGTAATTCTTCTTTTAAGTCAAAATATAATCCGGTTGAATCCATTGGATCGAATAAAAGTAG # Questionable array : NO Score: 2.76 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:-0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAACTACTTACGTAAAATTACTAAAAGTGAAAGGAACTCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.75%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.00,-1.80] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [65.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA //