Array 1 63755-60967 **** Predicted by CRISPRDetect 2.4 *** >NZ_LXHK01000015.1 Moraxella catarrhalis strain N4 B615ctg30, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================================ ================== 63754 28 100.0 32 ............................ AAGCGTGAGCCACACACAGGTGAAGAGCGTGC 63694 28 100.0 34 ............................ GTGCTGGTTGCACTACTTGGTCTGACGATGATTG 63632 28 100.0 32 ............................ AAAACCCAAAGCCCACACGCCAAAAAACAAGG 63572 28 100.0 32 ............................ ATAATAACTACTGCGAACATACTATTCTCCTC 63512 28 100.0 31 ............................ TATTTGTTCTGTTAAAATTGCGGTAATGTAT 63453 28 100.0 32 ............................ ATTCGTCGATAAATTCTTTAACACCTTGCATG 63393 28 100.0 31 ............................ GAAAGAAAAGTTTATCGCCTTTATGATGGCA 63334 28 100.0 29 ............................ TATTAGAAAAATTTTCAAAATCATAGCAT 63277 28 100.0 32 ............................ TATAAAGAACATATCTTATCAATTCCCCGTGA 63217 28 100.0 31 ............................ TGTATTTATATATTAGATGATAATTCAAGGA 63158 28 100.0 31 ............................ TTGACCCCCGCCCACTAGCCCCAGTTGTGAG 63099 28 100.0 32 ............................ GCCGACAATACTACCTTGATAATCATTAGCCA 63039 28 100.0 32 ............................ TATCGCTAAGGCAGGGTTTAAATACCATTCAA 62979 28 100.0 30 ............................ TAAATTTCACTTACTACAAAACAAAAGGGA 62921 28 100.0 32 ............................ ACCCCAAGATGTAGATTTACCCCTTGCCACCG 62861 28 100.0 32 ............................ AGTATAGTGATTTTCGCCATTGACACACTGGA 62801 28 100.0 32 ............................ GCTGATGACAATCACCAATTTACCATCACCGC 62741 28 100.0 33 ............................ AACTGTGTTAATCCGCTCAGACAAGCTTTGATT 62680 28 96.4 30 .............T.............. CTTACAATTTTTTGTCAAAATGCTGCATAA 62622 28 92.9 32 .............T....T......... ATTCATTGCCAAACCTTTGATTGGTACAGTCG 62562 28 100.0 32 ............................ CAGTCGAATTCACCATGCCAAACGCCATTTTC 62502 28 100.0 31 ............................ ACGGGCGAAATTCCACCCAAATTCATGCCAA 62443 28 100.0 28 ............................ ATCAAAATTTTGACGACTTATTTTTTTG 62387 28 100.0 32 ............................ AGCGTATCAACACCTTGCAAAGCGACTATAAC 62327 28 100.0 33 ............................ ATTGTGGGTTAATGTCAGATTTTCCCTTGAGTT 62266 28 100.0 32 ............................ GTATTTAATTTCTACAACTGCGCCTGATAATT 62206 28 100.0 31 ............................ CTAAATTCATGCCAAATAATACCCCTGTACG 62147 28 100.0 31 ............................ ATCTTGAACGAACGCTAACAACAAACAATCA 62088 28 100.0 32 ............................ GCTCAACACTTGTCGCCTGTCTGCTTTGGGTT 62028 28 100.0 32 ............................ ACAGTTCATTATTACCACCTGTGCCGACATTC 61968 28 100.0 33 ............................ TCCTTCAAAAATAGCGAAAATAAGCGTTTTAGC 61907 28 100.0 33 ............................ AAAGCTAAAGGCGGCGCAAAAAGTCAAACACCG 61846 28 100.0 32 ............................ ATAGCAGTATATCCGAATCAATAACAGTATAT 61786 28 100.0 31 ............................ AGTAAATCAAGAAAGTAGTCGAGAAATACTT 61727 28 100.0 30 ............................ ACAAATATCATTACCCCAAGCCGTGAAAAC 61669 28 100.0 31 ............................ CCACACTTCCCACCCTGATTATAAAAAGCCC 61610 28 100.0 32 ............................ ATGACAGAGAACGGTTAAGTACAACGGCAATC 61550 28 100.0 32 ............................ TTGATACACAAAACATGTCTATTGTACTTTCT 61490 28 100.0 32 ............................ TTGTATCTGTGTCAGATTTGAGTGCGTGGCTA 61430 28 100.0 32 ............................ TTTCGCAATAAGTTTGGCGAATATATCTCACT 61370 28 100.0 32 ............................ AAATCAAGCCGGTGGTGTTGATTTAGTGAGCA 61310 28 100.0 32 ............................ AGCGATTGAAAGTAATATTAATAGCTTTAATA 61250 28 100.0 48 ............................ ACAATCAACGCCTAGCATTGGTTGATGAGTTTACCAAATTGGTTGCAA 61174 28 96.4 32 .............T.............. TTTGGTGATTACAAGCTACCGTCCGAATTTCG 61114 28 96.4 32 .............T.............. AACTCGGCAGCAATACCGCCAAGACATGTAGG 61054 28 96.4 32 .............T.............. AACTCGGCAGCAATACCGCCAAGACATGTAGG 60994 28 96.4 0 .............T.............. | ========== ====== ====== ====== ============================ ================================================ ================== 47 28 99.5 32 CTTCACGACCGCACAGGTCGCTTAGAAA # Left flank : GTGCCTGTGCCAAGTAAAATTACTGTGGTATTGGCGATGGGGATATTATAATAGTGGTTTTGGTATTTCGTTTCGGTCAGATATAAGATACGCCCGTCTTTTTGCATGACTCGGCAATGCTCAAGATAAAATAAATTCGCCCGTTTGGAATGTAAAATTGCTTTCAAATCGGTCGGTTTGAGCGTATTCATAATGATACAAATCCATGTTTAATGATTCAATTTTATCCTAACAATTTTCAACATCATTTAATATGATTTTATTGGATTATAAACTAAAAATAAATTTATACCAATCATTTTTTAATTGTATTTAGCGATTAAAATGTTTTAAGATAACCCAACCAGAAGATGGCAAAATAACGGATTGACCCTTTATTTTTTACTATTTAAAAACTTGAATATTTTCAATAAGTTATAACATTCAGATTTTTGATTGGGTTTTTGACAAATTTTATCATAATGGCTTGTTATTTCTTATTATTTTGGTTTATAATAACT # Right flank : TTTCGTTCTACAACTACGCTGATTATTTAAAATTTTTGTACCAATCCCTTGAAAATTTTATCCTTAACCATTATGAAGATGGGGAATTTATATTAACTTTTTTGGGGTAATTTATGACCGAGCAAACCATCGAACAAACCACCATGGAAGAGATTACGGCTGAGACGACAACCGAGCAAGTCGAAGCACTTCACAGCCAAATCCAAGCACTAGAAAGTGAAGTCAAAGAAGCCAAAGAGACTGCTGCGCGTGCCAATGCCGAAAGCTATAACGCCCAACGCCGCATGGAACAAGAAACCGACAAAGCCAAAAAATTTGCACTACAAAAGTTTGCCAAAGAGCTTTTGGAGGTGGTTGACAACCTAGAGCGTGCCATTAAAGATGCTGAAGAGACAGGTGCAGATGAAGCATCACTTGAAGGCATTCGCCTAACACATAAAGTACTGCTTAGCGTCCTTGAAAAAAATGGCGTCGTGGCCGTGGGTAATGTCGGTGATACA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACGACCGCACAGGTCGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTTCACGACCGCACAGGTCGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.10,-7.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [0-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //