Array 1 78986-73809 **** Predicted by CRISPRDetect 2.4 *** >NZ_LSLK01000092.1 Sporomusa silvacetica DSM 10669 SPSIL_contig000092, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 78985 29 100.0 35 ............................. AGACGATAGCGCCGGGAGGCCATATATGCAAGATC 78921 29 100.0 36 ............................. GGCATACAAGGGAATAACCCATGTCGGCATATACGC 78856 29 100.0 35 ............................. ACCGTTTCTAGCTTTTCATAAAAATCTTCTACTGA 78792 29 100.0 35 ............................. CTGGAGCCTGCTGCGCTCTCCATGAGGCATACTCC 78728 29 100.0 34 ............................. ATATAATCCTCGATATCAATATTGTTTTCACCAC 78665 29 100.0 35 ............................. TTTGAATCTCTTGGGAAAGAACTTGGGATAGCAAA 78601 29 100.0 34 ............................. GTCGTTAGCTAATAGCAAAGCGCCCGGGGCGCAA 78538 29 100.0 35 ............................. AAACAATCTTGACCTGTCGTATATTCTCCCGTTCT 78474 29 100.0 36 ............................. AAGATTAAACTGCTTACCTGGCAACGAAATCTATTT 78409 29 100.0 35 ............................. GCGGGAGACTGTTTTAAGTAGCACCTTGCCATCTC 78345 29 100.0 36 ............................. TCCCAGCCAAGTTCGTAATCATTGCGCTCTGGTTTC 78280 29 100.0 35 ............................. AGTTGTTCGCCTCCTTTGCTATATGTAACAGTGAT 78216 29 100.0 35 ............................. CTGAATAAACTTATTTTCTGTTTCGTTTTTGCTAT 78152 29 100.0 35 ............................. TTAACTACAGCGAACGAATTAAATTGGCAGAAGCC 78088 29 100.0 36 ............................. AGGGTAAAGACTCAGTAAACTTTGGCATACAATGGC 78023 29 100.0 35 ............................. GAGTATCCAGAACTAAAGCTAAGAAATCCCGGCAC 77959 29 100.0 35 ............................. AAGAGTCGCAACACTGGAAAAGTACCAAAACATTC 77895 29 100.0 36 ............................. ACAACTGTCCGGCATAAGAAAAGAACAGGAACTCCT 77830 29 100.0 36 ............................. CTCCAAACAAAGGCCAAGAACGCAGAAGCACGTCTT 77765 29 100.0 36 ............................. AAGGTTTTGACGATGGTCGCCCTACGTTTGGTACAT 77700 29 100.0 36 ............................. ATAAATTCATCCTCGGTCAGCACCGGGCGTATTTTT 77635 29 100.0 35 ............................. TTGTGCAAGCGTGTTGTAAATCCCTGGCCCACTGC 77571 29 100.0 35 ............................. CGATAACCTATGATCAAGCTATACCAACTACTGGC 77507 29 100.0 36 ............................. TGCACATGCATGCGATGGCTTCAAGTACGATCCCAC 77442 29 100.0 34 ............................. ATGACAAACGCAATTATAAAAACTATTGTCCCGC 77379 29 100.0 35 ............................. ACTGCTACAGGCGTAGGTTATCTCAAGGCAGATAT 77315 29 100.0 36 ............................. TTTCCAAAATGGAGGGGACTGTAGAAATTGATTCAG 77250 29 100.0 36 ............................. TCAAGTGTGGTAAATTCAAGTTGCATGGGACAACGA 77185 29 100.0 36 ............................. TCGAGAACAGTAATACAGACTGAGCCGGGAAACCGG 77120 29 100.0 34 ............................. CCCATAATGCGGCGTCGTCCTCACTGGCAACTGG 77057 29 100.0 34 ............................. TTTGATTACTCTTGGTCTTGCTACAGGTTTACGC 76994 29 100.0 36 ............................. TTGTCATACTTGTGTAGGTCATGCAGATGAACTCCA 76929 29 100.0 35 ............................. TAAGAACATCTTATGATTCCAAAGTCTCCTTCTCC 76865 29 100.0 35 ............................. TATGCAGAGCAAGCTACAGCACAACAGCAGTTTAC 76801 29 100.0 35 ............................. TATGCAGAGCAAGCTACAGCACAACAGCAGTTTAC 76737 29 100.0 35 ............................. TAAAACTTAATCAAGAGTATCATAAGGACGCAATC 76673 29 100.0 35 ............................. TATGTAAATCTTAGTTTATTAGCGGTTATCTCTAT 76609 29 100.0 36 ............................. CTAACTGCGTCAAGTTGGTTTCCAATTGCGTCAATT 76544 29 100.0 35 ............................. TAAAAGGTATATCGTTCCCATAACCTTCGATATTC 76480 29 100.0 35 ............................. ATAATATACTCCGCAGGAAAACCTTGCGCCGCAAA 76416 29 100.0 36 ............................. TAGCAAGGGTGGACAAGCCGGTAAAAAGTCCATGGA 76351 29 100.0 36 ............................. GCGGATATCGGCCACGAATTTTTTATCCGGTTGTTT 76286 29 100.0 35 ............................. CCATAAAAACGGGCTAAAATTCCCACCTTCGTCAC 76222 29 100.0 35 ............................. ACAGGTACTACAACAGGTACTGTCAAAGACGATAC 76158 29 100.0 35 ............................. TGCAAATAACCTTCGACGTGCCTGACGCAGAACGA 76094 29 100.0 35 ............................. AGTGATTCATTACGTTCTTTTTTGCTTTCTGCCGG 76030 29 100.0 35 ............................. GTAGCTTGGCAGATTGAATTGTTATTGTGTATGCA 75966 29 100.0 36 ............................. GCTGAAGGCGTGACCGATAACCTCTGCAAAGGCACT 75901 29 100.0 35 ............................. TGCCAAGCGGGGAACCTTCCTCCGGCTTGTTTGAT 75837 29 100.0 36 ............................. AAAACATTCGTACAATTTGTCGCTACTGCTACTGTT 75772 29 100.0 36 ............................. TTGGTTTCGTCAGTAATTTCAGTTAGGGCCGCGCAT 75707 29 100.0 35 ............................. TCAGAAATAAGGATATCAGCACGCGAGCCTGTTAA 75643 29 100.0 36 ............................. ATGTCAAAAATCAGCAAAGGCTATTAACCTTCGATC 75578 29 100.0 35 ............................. TTGAGAATCTACTCTCTCACTGGCTTTTGGATCTT 75514 29 100.0 35 ............................. CCCATAGGGAGCTTGATGATATGCTCTCCCTTATG 75450 29 100.0 36 ............................. CTGTCATAAGCAATAATTTCTATGTCAACATGTCCC 75385 29 100.0 37 ............................. TTCCTTATCCTCAACAATCTTAATCCCGAGCACGCCA 75319 29 100.0 35 ............................. TCGGATCTGGCCTCCTTCCGATAAGGCAGTTCCAG 75255 29 100.0 37 ............................. GTAGTTCCTGGTTCTGCATCTGTGCTTTGAGTTGCCG 75189 29 100.0 36 ............................. CGGTGACCAACAACGGTTTTGGCGGTCGGTGTCATT 75124 29 100.0 35 ............................. ATCGTTTTGATTTTCAACATCGGTTTCTTTCCCCG 75060 29 100.0 34 ............................. GTCTGATATGGATATAAAAACCCGTCCGAATCGT 74997 29 100.0 34 ............................. ACACCAACACCCGGAGAAGCAGCGACTTCACCAC 74934 29 100.0 37 ............................. CTATGTCAACTGAGCGCCCAATCGCTAAACTAATTCC 74868 29 100.0 35 ............................. CTGTTAAACACAATTCGGTCAGTTGAAGCATCTAC 74804 29 100.0 35 ............................. ATCGCAACCTGATATTGTTTTAATAGTTCTTGCTC 74740 29 100.0 35 ............................. GAACAAACTAGAGTAAGTTTATAATCAACAACGTT 74676 29 100.0 35 ............................. ATCAGATCAAACCTGTTTAGGAATGGTGCATATTG 74612 29 100.0 36 ............................. ATTAGCCCAACAGTGGCCCCGGTAATTGCCGTAATA 74547 29 100.0 36 ............................. GGTATCTGATAGTCCCCATCTTCACGCTCATGTCCT 74482 29 100.0 35 ............................. GTGTAGGGGCTGTCAGGGGCCGGAATGGTTGCCAT 74418 29 100.0 36 ............................. CCATCGCGACAGTAACAATTTTACTTACCGGTGCTC 74353 29 100.0 36 ............................. TGGTGTCTGCATCGGCATCCGTGGCAACTGCTGCTA 74288 29 100.0 36 ............................. AATATCCTGTAAGCGCGGTTTTCAGCTTTTCGATTT 74223 29 100.0 35 ............................. ATAGCTGAGTCATAGAAGTTGGATTGGCTGAAGAT 74159 29 100.0 36 ............................. TCCCTATTGGCATTTGCCCTTAAGGTCAGCCAAGGA 74094 29 100.0 37 ............................. AAAGATAAATCAGTTGGGACAATCACGGTTTGGCCTG 74028 29 100.0 36 ............................. TCGTCAGTCAGTGGTATTCCATTGAAATGCGATGAT 73963 29 100.0 34 ............................. TTAATACCGTCGATCATGCCGCGAAGTTCGGCAA 73900 29 100.0 34 ............................. ATAATTAAGCGGTGTAAGGCTAAAACGGTAGCCT 73837 29 96.6 0 ..........................T.. | ========== ====== ====== ====== ============================= ===================================== ================== 81 29 100.0 35 CTTTAACCGTAACATGGATGTATTGAAAC # Left flank : TACACCTTTTCTGGAAAAAGACCGGAGGTAAGCATATTATGGCAAAAAATTATAATTATGTTATTCTTGTCTATGATATTGGTGAGAAGCGTGTAGGAAAAGTGTTTAAGATATGTAAGAAGTATTTGGTTCCTTTCCAAAAGTCGGTTTTTCGCGGCGAAATTACTCCTGCAAACTTAATTAAACTTCGAAGTGAACTTCAAAAAGTCATTGATAAAAAAGTTGATTTTGTAGCTCTTTTTAAAATGACCGGTGATTATGTATTTGATGAAGAAGTTATTGGAGTTCGTCTCCATGATCAAGAATCAATGTTACTGTAATAATTTTCCCAACCGGCATAATCTCTAGGCGAGGCTTGCGCCCAAGAGATATAAGGAATGAAGAGCAATTTTGGGGCAAGTGCCTAAATGTTGCTCGCCGGTTGGAAAAATATTGCTAAACCCTTGTAAACATTGTATTGTATAGCTATAGGTATTTTTGCAAAGCTTGATTTTACTAGC # Right flank : TAGATATCGCCAAAAAGAGAATTGATTGTATCATTTGCCCATTATTTTGTATTATACTTTCAGAATACGAAGCAGAAAGAAGGTTTTTATCATACGGAACATAATCTTTGACGTTGACGGTACTTTATGGGATACAACGGAAGTGGTAGCTCAAGCCTGGAACAAGGCAATTTCTGAAGTCGGCGGAACTGCGGCAGTGGTAAGTGCTGCTGTGTTAAAGAAAGAGTTCGGTAAGACGATGAAGGTCATCGCCGATAGTTTATTTTATGATGCCGATGAGAGAACTAAAGAGTTACTAATGGAAAAGTGTTGCATATATGAGCATGAGGCACTGGAAGAAAATACGGATAACCTGCTATTTCACGATGTTGTAGAAACCATAAAAAAACTTTCCGAGAAATATCGTTTATTCATTGTAAGTAATTGCCAAGCGGGCTATATTGAATTGTTTATGAAAAAGGCGGGTATTGAACTGTATATTAAGGATTGGGAATGCTTTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTAACCGTAACATGGATGTATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA // Array 1 3304-980 **** Predicted by CRISPRDetect 2.4 *** >NZ_LSLK01000099.1 Sporomusa silvacetica DSM 10669 SPSIL_contig000099, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 3303 32 100.0 32 ................................ ACCATATAACGGGCTAATTAGTAGGGGTGAAT 3239 32 100.0 32 ................................ CAGTAATAGGAGCACCACCACCTAAATATGTT 3175 32 100.0 32 ................................ CCTTGCTTCTTATCTCCACCATGCACATGCAC 3111 32 100.0 34 ................................ CTCAGTAGTGGTAATCATGTACCCTTTTTCCATT 3045 32 100.0 33 ................................ CAGTACCGGGTATCTAATGCGTAGAAGTCAGTT 2980 32 100.0 34 ................................ CGCAATCATTCATACCCTTGTCGTACCACTCGGA 2914 32 100.0 35 ................................ ATTAGGTATGCTTTTTGCTCTCTGCCGTACGAATC 2847 32 100.0 34 ................................ TTTTACAACCAACAATGCAACATCATCTATATTT 2781 32 100.0 34 ................................ ATGCAAGAAAGAGAAAATTTTATCATAGGAGAAA 2715 32 100.0 34 ................................ ATTGGAAACGGATTCTTCTCGCGTTGGTACTGCG 2649 32 100.0 36 ................................ AAACTTGACAAGTACTTTGAGGCTAACAAGTCTGAC 2581 32 100.0 32 ................................ CCCAATGGCATGACAAAAGACATGGAAGTTAT 2517 32 100.0 32 ................................ CTCTGCCTGTTCCCTGCTGTCTGCCTCAATAT 2453 32 100.0 34 ................................ ACTGAACTTATCTTTAAGCTGTGCGCCCGTGAAC 2387 32 100.0 34 ................................ ATCAGCAAGACGTTCTAAATCAACTGCTTTAGGT 2321 32 100.0 34 ................................ TCATTTTAAACGCTCCTTGTGGTCGTTGCTATTT 2255 32 100.0 33 ................................ GACGGGATGCTACTAGGATTTACATATCACGAA 2190 32 100.0 34 ................................ ATCTTGAAAATCAATAAACAATCTGAGCGACAAC 2124 32 100.0 34 ................................ GGTTAAGCATGGTTTTTAATTCCTTCACAGCATC 2058 32 100.0 33 ................................ ATATGGTACAGCTCCAGATAATATCTGCCCTCC 1993 32 100.0 33 ................................ TTCTTATCTTGAATGGATTGCCACATGGATTGT 1928 32 100.0 33 ................................ ATTGCCTGCGTGAATCTTTCGTTGCGTTCTTTA 1863 32 100.0 34 ................................ AGTATTACAGCTAGGACACAAGGCGGGACACCAC 1797 32 100.0 34 ................................ TTCGCGTGTCACTTATTTATCACCGTCCCGTTTA 1731 32 100.0 33 ................................ TGTATTGACTTCGCGCTCTGCTTGTTCGGCGGT 1666 32 100.0 33 ................................ ACAGGGGTGAAAAAGATTATTCAGAGCTTTTTA 1601 32 100.0 34 ................................ GTTCTCACTGCTGCACTCATACCAGCCTTCTGGC 1535 32 100.0 34 ................................ CATAAAATCATCAAATTCATTTGCCGTTATTGTT 1469 32 100.0 34 ................................ ATGAATTGGGTTGCCTCGTTTAAATCGGCAGGCA 1403 32 100.0 34 ................................ CTTAGCTATTTCCTCTAGGTCTGCTATTGTCCGC 1337 32 100.0 35 ................................ CCTTGGGGCGTCAGGTAAGCCGTGAGTGCGAACAT 1270 32 100.0 33 ................................ CATGTCCCGGGTGTGCCAGCGACTGTACAAACC 1205 32 100.0 32 ................................ AATAGTGTGTTATGGCATGTTGACGATGCAAC 1141 32 100.0 34 ................................ CCAAATCACTAGCTTTATAGTCACCGCTTTGCAT 1075 32 100.0 32 ................................ TTTGTGAACATTCCTTGTGGTCGCAATGGAGA 1011 32 81.2 0 .........................GAAGTT. | ========== ====== ====== ====== ================================ ==================================== ================== 36 32 99.5 34 GTCGCGCCCCGTACGGGCGCGTGGATTGAAAC # Left flank : TTAGAAGATTATCCGCCATTTTTCTGGAAGTGAGGGACAAAGGATGTTGGTTTTGATTACCTATGACGTGAATGTGACAACCGAATCAGGCAAGTCACGTTTGCGGAAAGTTGCTAAACAATGCGTAAATTGTGGTCAACGTGTGCAGAATTCAGTTTTTGAATGTCTGCTTGATCCAACGCAATTTGCACAATTGAAGCACCGCCTTGAAGGAATTGTTGATCCGAAGACCGATAGTTTGAGATACTACTTTCTAGGTAGTAATTGGAAAAAACGGATTGAGCATTTTGGTGCTAAATCTACTTATGATCCAGAAGATGTTCTGATGATCTAATGCGAACCTATAGTGGACATTGTTTTCCTGATGTATTCGCACTATATGATTTATAAGGTTTAGGACGAATTTAATGTTAAAAAATCTAAAAGCAACTTAAGATTTTTATTAGGTTCGCAAAACCAAGTGATTCAACGCTTGGTTTTATTGTGGAATAAGATTGGCA # Right flank : AGGGACGGTTCTATTGCTTCCTTTCTTCTTTTATGCTAAACTGGAGAAAAAAGATGGCGGAGGGAGAAAATGCCAAGGATTGCAAGAAAGAAAAGTAATAGCGGAATCTATCATGTTATAGTAAGGGGAATCAATCGGCAGGATATATTTCACGAAGAGGAAGACTATACAAAGTATTTAGAGGGACTGAAGCGAGCGCAAGACATAAGTAAATTTGAGATATATGGATATTGCCTAATGAGTAATCATGTACATTTGTTGCTGCATGAAAAAATAGAGAGTCTGGAGTCAATAATGAAGCGCGTAGGAGTTAGCTATGCTAGTTGGTATAACAAAAAGCAGGAGAGGGTCGGGCATGTATTTCAAGATAGGTATAAGAGTGAACCTATAGATAGTGACGCATATTTGCTAAGCGTGTTGAGATATATACATAATAATCCAGTAAAGGCACAACTGGTATTGCAGGCAGAAGACTATATGTGGAGCAGTTGTAGAAAGTA # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCGTACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCCGTGCGGGCGCGTGGGTTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.80,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.41 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //