Array 1 108731-107743 **** Predicted by CRISPRDetect 2.4 *** >NZ_MCMX01000004.1 Pseudomonas aeruginosa strain F69A isolate IST27 IPC84_4.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 108730 28 100.0 32 ............................ AGGTCGAAACGAAGGTGCTGATGGGTCGCCTT 108670 28 100.0 32 ............................ AATAATAATACTCAGCCCTAGCGCCCTGAGCA 108610 28 100.0 32 ............................ ATGTCGTGGCGGTCCTGCAGGCCCACGATTCC 108550 28 100.0 32 ............................ ACCGGGGTAGGCGCCGATGATCGCGCTGACCA 108490 28 100.0 32 ............................ ATTCCAGCATCTGGGACGGCGATCGCGATTCG 108430 28 100.0 32 ............................ GCCATCGACCGCGAAGCCGCAGACGGCATTAC 108370 28 100.0 32 ............................ AATCCGTCCAGGCGGAGTACGCAACCACCGTC 108310 28 100.0 32 ............................ TGGTAGACGGGATATGGATCGGCGAAGTCCTC 108250 28 100.0 32 ............................ GATGACGAAAGAGCCACCGCCGCCCTCCACCG 108190 28 100.0 32 ............................ TCCCATAGACTTGCCGATCTCGGCTGCGGCGC 108130 28 100.0 32 ............................ TTGACCAGATCGCGGCGTGGGGTGGTCGGCTT 108070 28 100.0 32 ............................ TGCCCGCCATCAGCGAAACCGAACATGCTTGT 108010 28 100.0 32 ............................ AGTGGGCCGTCCCACTCAGTGAAGAACGCCCC 107950 28 100.0 32 ............................ TGGAGAAAAGCAATGCGAGTGGTGCGAGGCCA 107890 28 96.4 32 ....................T....... AGACAATCCGGACCTGCCGCCCAGGACGATCT 107830 28 100.0 32 ............................ TGCAGCGACTGCACCTTGGCTTGCTGCCGGTC 107770 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 17 28 99.8 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : CATGTGTCCGCGTAGCGCGACCCTGTACGTGGACACCCATGCACTCCCCACGCACTTGTTCGACAACGCGAAAGTGCGCCTGAGGTCGGCGATCAACATCCTGGCCATGACCCGTTTGCTCGATGAGAAAGAAGAGCCCGGCGGCACCCTGGCCTACATCAACGGTGCGTTGCTGTCGCTGCTCAGCGATGCCTTGTCCGAAATCGAGGCGGGCCACCCGAGCCTGTAGCGCCGCTCCCTGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGCGGCATCGCCCATCACAAGACCTTTCGCGCCCGAACGGCGAGGCTCACCGCCCGTCCCGGTCCTCGCGAAACGGCCTCCAATTGCCCGAAACTTCCGACCCTTTTTTCGGACGATTTCTTACGCCCTTATAAATCAGCAAGTTACGAGACCTCGAAAAAAGAGGGTTTCTGGCAGGAAAAACTCGGTATTTCCTTTTCCTTCAAATGGTTATAGGTTTTCGGGGCTA # Right flank : CTCAAGAAAGAGCAGAACGGCCAGCCTGCGCCGTTCATTGCCGTGTAGTCCCGTAGGGCGAATGCCGCCATAGGCGGTATCCGCCCTACGGATCGGGTTCCTGGCATGCACGAAGTGAGGCTTGCCCTCCGAGTGGTGGGGCGGCAAACCCGCCCCGTCAGGAGGCCGAGCGGAATCGTTGCGGAGGGGGACGAGTGGCAGGATGCCGCGAGAGCCGCCTCGGTCCACGAAGGACCGTGGCGGCGTGCCGCCGGGAGCAACGATGCAGCGAGGGCACCCCAGCCGAGAAGCGGCTGGGGCCGGATGCCGGGGCGAGTCTTTTGGTTCCTTTTGGACGCTTGCAAAAGGAACTCGCCTGGGAAGGCGAAACAAGAGGTCAAGGCAGGCACAGAAAACAGCTTGACCACCAAACATGACGCCCGCTCAAGCGCTAAGCAACAGCGCCCCCCCTCACTGCCGTGTAGCTAAGAAATCGCGAGCGATATAGTCCCGTAGGGCGA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //