Array 1 557448-558425 **** Predicted by CRISPRDetect 2.4 *** >NZ_FLKL01000002.1 Clostridium sp. Marseille-P2538 strain Marseille-P2538T, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 557448 33 100.0 33 ................................. AGACGCAAGTATAGTCAACGGAAATTTTCCTCA 557514 33 100.0 35 ................................. ATCTTAATGTGTTTCAGCATCTCAGCTTTGTCTTC 557582 33 100.0 33 ................................. AAGAAAGCCCATGCTTCATCAAGGTCTACGATT 557648 33 100.0 35 ................................. AATTTCATGGGGCAGATATGCTTGAAAAATTCCTG 557716 33 100.0 37 ................................. GTATGGACAGTGCGGGATTATCCATGTGGATTGCGTA 557786 33 100.0 33 ................................. CCTTTCTTTCAAATACCCTCCCTGCACCACTTG 557852 33 100.0 34 ................................. ATGTCGTGTTTTCCGTCTCCCCTGTCTGGTCTTA 557919 33 100.0 36 ................................. ACGCCGGTTATGGTCTTCTGTTCCGGCTTCTGTGCC 557988 33 100.0 34 ................................. GTTGCTAACGTGTTGCGAACCGTACGCAATTATC 558055 33 100.0 34 ................................. GCATCTTTGGCATTCATTGTGGTCCATTCTTAAC 558122 33 100.0 35 ................................. AGCCCACAGGCTCGGCGCCGCATCCGGTGTCCAAT 558190 33 100.0 37 ................................. ATATGTACAGGACTATGCCCAATTATCGACTCTATAC 558260 33 100.0 35 ................................. ACCGCTTTTCCTGCATAGGTCACTTTTGGTCGTAG 558328 32 90.9 34 .G.-..................C.......... ATCTCAGGAAAATCACAGCCTATCGGACATAATT 558394 32 87.9 0 .....-........A.......C......G... | ========== ====== ====== ====== ================================= ===================================== ================== 15 33 98.6 35 GTCTCTACCCATTTGGGTAGAGTGGATTGAAGC # Left flank : TGAGAAAGGTTGCAAAACAATGCGTGAACTATGGTCAACGGGTGCAGAACTCTGTGTTTGAATGTAACCTTGATGCCGCAAAATTCCGGCAGGTAAAGGCTATATTGGAAGACATTATTGATAAAAGTAAAGACAGCCTCCGGTTTTATAATCTGGGCGATAAATATCAGAATAAGATTGAGCATATTGGAGCGAAGAAAAGTTTTGATGTGACGGATACTTTGATTTTTTGAACTTATTAAAGGATGTGCCATTTGAATTTTGTAGAAGAATTAGCGGCGGAGCTTTGTTTGGTCAGGAACGTGTACTTATTGAGAGAAGTGGAGCGGTGCGAATCAGATGCAAACATAGAAATGCGGAGAGATTCGCACCAGAATGTGTTGGGATTATTTGATAACAAACGAAGGATTAGAGTTTGGTTTTTCCTTGGAATTTGTAAACTTGTGCAATTGCAACAAAGTTATGCTGTGTATGAGAAGGGTAATTTGTGTGTAATTGCC # Right flank : CGATGTTATTCTAGTCAGAAAACTAACCTGCTTTTAGCTCTACCCATTTGATTAGAAAAAGAAAACGGGTAAGGAATTACCGGAAGATTATGAAGATGTGATACAGGTCATGCTTGAAATGGAGGCAAACTGGAGCAGGAAGCAGTGGAATCCAGAAAAATAATACGCTGAGCTCGTTGTAGGGTGTTAGAATCGCGATGTAAGAAACGTTAGTGTGGAAAATGGTTGTCCGTATTTTGGGACAGCTATTTTTCTATGCTACGTATAACAAAAGAAAGCTGCTGTGGAACGCAAACCATTTTAGACAGGATATGAGACAATAAAGAAGGGAGATAATACCATGAAGGAAGAGTATATTACGATAGTTGGATTTAATCATTATTACGGAATTCATCCATTTAAGGTAGGCAAAACAGTCAAATGTGTTAAGGAACCGTATAATCCATATGATGGGGAGGCTATCAGAGCTATGATGAAGAATATTGGAATGGTAAGGTAGG # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCTACCCATTTGGGTAGAGTGGATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.30,-6.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 2 3343846-3342816 **** Predicted by CRISPRDetect 2.4 *** >NZ_FLKL01000002.1 Clostridium sp. Marseille-P2538 strain Marseille-P2538T, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 3343845 32 100.0 35 ................................ ATGTGCGAAAAGGATTTCTTAAATAAAGTCGAATT 3343778 32 100.0 34 ................................ GATTCCTCCGGTGTCAACCGCTCGTCTTTTTTAT 3343712 32 100.0 35 ................................ GATGGTGTATGCTGAGACCGAAAATTGAACCTTTC 3343645 32 100.0 35 ................................ ACGCAAGATGAATGAGATTATGCCTTACTACAATC 3343578 32 100.0 34 ................................ ATAAATTCGCAACAATAAAAGGTTATGTAACAGT 3343512 32 100.0 36 ................................ GATGAAAGCTACAGAGCTGGTCTTAACAAGAAGATT 3343444 32 100.0 35 ................................ ATGATGTAAACTGGAAATCATATGCAATGTATACC 3343377 32 100.0 34 ................................ GTAGAAATGCGGGGTTGAAATCACCAATAAAATC 3343311 32 100.0 34 ................................ ATTCAAGCTGACAGGGCCATGTGCCTTGGCTATA 3343245 32 100.0 33 ................................ ATCCCGTACAATCCGGTCGAGAGCGTAGAGCTT 3343180 32 100.0 35 ................................ AAGAATGGGCTATTAACCGGCGGCAAGACCGCCAG 3343113 32 100.0 34 ................................ GTAAATCCCTTCAAGGCCGGAGCAGCTGATGCAG 3343047 32 100.0 34 ................................ AGAACCGATGACTTTAAATTCGGAGATAAATTTT 3342981 32 96.9 35 ..............A................. ATAGACGAAATGAGAAGGAGACCATGAAAGAAGTC 3342914 32 100.0 35 ................................ TTATCAGAATAGACACCATAGACTGCACAAGCAAG 3342847 31 81.2 0 ..T....T........T..-..T........A | T [3342819] ========== ====== ====== ====== ================================ ==================================== ================== 16 32 98.6 35 GTCGTTCCCCTCGCGGGAACGTGGATTGAAAT # Left flank : GCTTATCCTCCATTTCTGTGGAAGTGAGGTGATCTGAAATGCTTGTTTTAATAACTTATGATGTAAATACTGAAACAGCAGCTGGGAGAAGCAGACTCCGGAAGGTTGCAAAGTAGTGCGTGAATTATGGAACAAGAGTACAAAATTCGGTATTCGAGTGTATTCTGGATAATGCGCAGAGCGTGCTGCTTAAATCTATCTTGACAGACATTATTGATGAAGAGGTAGACAGACTGAGGTTCTACTATCTGGGAAACAATTATAAGACTAAAGTTGAACATATCGGAGTGGACAGAGGGTTAGCCGTGGATCAGACTCTGATTCTGTAGTGCGAATAGGAGTTGCACACAGAATGTCTGGGAGACTCGCACCAGAAATAGTGCACAAAAATGCCAGTTTGTTATAGGCTATGTATTGAAAAAAGAAGGAATAATATAAACTGTTGTGAAAAATAGTTGGCATCCATATTATGTATCAGCTGGAATTTGTATATGATTGCT # Right flank : GATTATGAGAACTCTTTTAAGGGTAAACGATTATATAAGTTTATATCTTAAGGAATGTCCGTCAGTTAGGGATTCTGCATATACCAACGTGCGAGGCTTAACTGAAATTGGAAAGTGTTTTATGGATATAAGAAATCAAAGCTGTTTCAAAAGAAATATGAAAGGAAATATTAGGAATTCCTAAAGAACTACTAATAAAGGGTGCATTTTTTCATAAGTCTGCTATAATATTCTGTAGGCTGTGACAAAGGAGAAGGTATCATGAGATACAGAAGCAGGGCCAAACCGCCCATATTACCGAAATACGCCATATTTCCTCTGCTTGCCTGCCTGACGGTTAATTTCCTGGCATACAACGGGACGGAGGTACTGACAAGGTCATGGAAGCATTATGACCTGACACTTCCGATAGACAGAGCTGTGCCGGTCATACCGTGGTTTGTAGCAGTGTATCTTGGATGCTATCTGTTCTGGATTGTTAACTATATAATGATTGTAAG # Questionable array : NO Score: 9.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTTCCCCTCGCGGGAACGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.20,-5.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,4.91 Confidence: HIGH] # Array family : NA //