Array 1 364241-364871 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP009531.1 Lactobacillus sp. wkB8 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 364241 36 97.2 30 ..........A......................... CTTTTTCTGGCCGCCTGAGTGGACTCTTTT 364307 36 97.2 30 ..........A......................... TGTACTATTCATAACAACGCATCCCCTTTT 364373 36 97.2 30 ..............C..................... TAGTAAGGTAAAAGGAACTCTATCTGAATT 364439 36 100.0 30 .................................... ATAATTAATCATAATATAACTAGCCTTGAT 364505 36 100.0 30 .................................... TTATAATCAGCATGCAGAAGTTCACCCATC 364571 36 100.0 30 .................................... ATTCACGCAGGTGAGAACAGTTGGTTAAAG 364637 36 100.0 30 .................................... GTTGCAGTCCTTCATAAAGATGATGAATTG 364703 36 100.0 30 .................................... TGAAACACGTTTAGCATCTTTAACTAGTCA 364769 36 100.0 30 .................................... TAGCCAGAGCAGACTCCGGAACACTGACAA 364835 36 75.0 0 .................G..CA..AC..T...AT.T | C [364862] ========== ====== ====== ====== ==================================== ============================== ================== 10 36 96.7 30 GTTTTAGATGGTTGTTAAATTGATGATGATTAGAAC # Left flank : AGTGGCAACATTACTGAAAAGTATATGACTCATATTGTAAGTAGTTATATTACAAACTTGGATGAGGAGAATCGCAATAAGGTTATTAAATCTTTTTATAATTTAGAAACTACTTTGCATGATACGTTATTACTTGAAGACTTACCTTTAGAAATTACTTTTGATGAAGACCTGAAAAAGTTACTTAAACTAACTGATGTTCATTTGGACAAAACTATTTTAAATAGTCCGTATGGTATAATAGAAACAGTTTTAAGAATTCACCAAGTTTGTAATTTGAGGACGATCCCCGTTATTTGTAATGTAGCACATTACATAGAAGAACGGGAGTGGCAAGAATTAGCTAGTCTTGTTACGCAAATGAAATTGATTGTGATTTTAATCGAATTTACTGATGCTAAAAATTTGCAGATACCTGAAGACATACCTTTTTATTATATTGATAAGGATCTAGTTGATTGGTATTAACTGTATTATTAAAATCAGATTATAAAACATCG # Right flank : TCTTAAGAAAAGTACCCTAAAATAAAGAAAGGTTTTTGTTTGTTTACATGAAAAATATACTAAAAAGTAAAAACAACAAACTATACCTTTTGTCAGTGATCACAGATAACTTGGGCAGCTCTTTAATGTCATTTGCGTTGCCGTTGATGGTACTTGATATCACTAAAAATGGTATTCACTTATCAATAATTTCTATTATTGAAACATTGCCTATTTTGGTTTTAGGTCTTCCGGCAGGTGCTTTAACGGATAAATTCGATGTTAAAAGAATCCTTATTTTCAGTGATTTAATTAGATTAATCAGCTATTTGATTCTTTCCGTATCCTTTCTATTCCATTTAACAGTCAATTGCATGATTTTCATTATTTATGCGGTATCACTTGTTGTCAGTGTAACCAACACGCTTAATACGGTGTCGGAAATTACTTTTGTTTCTTTTTTAGTAGAAAAGAAGGATTTTTCTGAATTAAACAGTCTGGTTTATGGCATACAATATGCA # Questionable array : NO Score: 3.10 # Score Detail : 1:0, 2:0, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATGGTTGTTAAATTGATGATGATTAGAAC # Alternate repeat : GTTTTAGATGATTGTTAAATTGATGATGATTAGAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.30,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 2 1093315-1093548 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP009531.1 Lactobacillus sp. wkB8 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1093315 36 100.0 30 .................................... CCCTTTTTTAAACGAGCGACACTGTTGACT 1093381 36 100.0 30 .................................... GGACTTAATCAGGTTAAGGATCAGAGAACC 1093447 36 100.0 30 .................................... TTGCTTAATTCTTCAACCATTTTGGTTCCC 1093513 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 4 36 100.0 30 GTTTTAGATGGTTGTTAAATTGATGATGATTAGAAC # Left flank : CTGAAACTTTGGAAACTATCCGTCTTTCACGTAAGAACGGATACAACACCATGATTTCTCACCGTTCAGGTGAAACTGGTGACACATTTATCGCTGACTTTGCCGTTGCTGTTAACGGTGGTCAATTGAAGACTGGTGCCCCAGCTCGTTCAGAACGTGTTGAAAAGTACAACCGTTTGCTTGAAATCGAAGAAGAACTTGGCGAAGGCGAGCGTTTAGCTACATTCCCAGACAGTGTTGACAAAGACTAATTTGTTAATAAAAAAGCCTGCAATATTGCGGGCTTTTTTAGTGTCCAAATTTTTAAAAATGTGTTTTTAGCATAAATCCAAGATTTAAACTTCTATGCTATAATTTGAGTAAACATTTAATTTCTAAAACTGCATTATCAGGACTAGATTAGCTACCTTTTTCCTGATATTGCTGCAAAAACTGGTCGTGTTTCTAATATTATTTGGTTTAATTCAACCATATTATTAAAATTTGATGATAAAACATCG # Right flank : CTTTTGGCAAAGCTCGCGCGAATTGTTGAAGGTTTTAGATGGTTGTTAAGCAAAACCAAAAATTATCATAAGCTCACAATAAAAGGCTTGCTTTTAAAGCAGCCTTTTTGTTTCGCCTATTTAACCAGCCAATTAGAAAATACAATTAATACTAGTCTTTTACAATATCTGTTCATTAAGTTCTTCATGCTAAATAACCAATAATTTTTAAAATATGATACAGACAATGTGGCAAGATCTGCAAATTTATTAAAACTAATTATTATTTACTTTCTTGTTGAATTCTCTCTTTGAAACATACTGAATTTTCTTAACATACTGACCTCTATGATCAATTTTGATATATTGCTTAGAAGGGTCGTAACCACCTACTCTTGTGATTCTATATGGAAGTTTCTTACCAGTCTTGGCATCATAAGCTTGAACGTTAAAATACTTTTGGGTATTCTTTTCTACTTTAGCATAACTTTTAGTTTCGAGAATTGTAAGATTGAAACGAT # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATGGTTGTTAAATTGATGATGATTAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.30,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [80.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA //