Array 1 1907481-1907977 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJHAQ010000001.1 Psychrobacter phenylpyruvicus isolate Psychrobacter phenylpyruvicus ACAM535, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 1907481 33 100.0 32 ................................. TAGCCCACCTATGACACGCAGCGATCGCTGTG 1907546 33 100.0 33 ................................. AATCTCTTTGGTGACGCTCTCAACAGTAGGCTC 1907612 33 100.0 32 ................................. TATATAAACCCAGTCACCTCTTGATAGGGTGT 1907677 33 100.0 35 ................................. ATCTGAGACAGGTAAGGTTGCTTACAAGATCAGTG 1907745 33 100.0 33 ................................. TTTGTGGGGTTGGGTTGTGAGCTATACCATGCT 1907811 33 100.0 34 ................................. CACGTAACAGTAGTTGCTACTGATAGGTTTGCAA 1907878 33 100.0 34 ................................. ATTAACGCCTTGTTCAAGTTGTCCGCCGCATAGG 1907945 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= =================================== ================== 8 33 100.0 33 TTCGCACCCAATCACGGGTGCGTGGATTGAAAC # Left flank : GGTGCCAAAAGATTGAGACAAATCGCCAAAAACTGTCTTAATTATGGACAACGTGTACAGTTTTCAGTATTTGAAATAGAAGTAAATCCTGCGCAATGGACAACTCTTAAAGCAACGCTAGAAAAGATTATCGATCCAGAAACAGACAGTTTACGCTATTATTATCTTGGTAAAAACTGGCAACGTAGAGTCGAGCATATAGGCGCAAAACCTGTACTGGACTTAAATGATATGCTTTTGTTCTAAACTAACCCAATTTTTTTATTAAAATTTTTTATAATGGTGGCTGTTATAAGGTCACTGCGAACCTATAGCGTACATAAAATCCCTGGGATATTCGCAATTAAGTCGCAAATTATTTAACAACTTGATTTTATTAACTTTATTTTTTAACTTTAGCGGTTTGGTAACTAAGCTAGTTACCAAATCTTGCCCTATGATAGTGACTCGCAAATTTAAAGGTTTTTTTTCAACCTAATCTGCAAGTTAACATATGGGCT # Right flank : CTTTGTTAGGGCGTGTCCTCAATTTAACCTACAGTGAATAATAGTACAAGCTAGGTAAAGCATAGATTTAAAATTGCGTGCTAGCTTTTCATAGCGTGTTGCTATACTGCGAAAATGCTTTAATCGAGCGAACATATTTTCAACTAGATGGCGTAATTTATAAAGGTAACTGTCAAACTCTGGGTTAGGTTGTTTCGTATTTTTTCTTCTAGGAATAACCGCTCTCATGCCATGTTCTATCGCTTTATCTCTGATTTTCTGCGAATCGTATCCTTTATCAGCTATAAAATATTCTGCCTGTTCAATCACTTCTATTAGGTCGTTTGCAACTTGACTGTCGTGCACTTCACCCCCAGTAATTTTAAAATCGATCGGATTTCCATGCGCGTCCACACATAGGTGTATTTTTGTCGTGTTTCCGCCACGACTGAGTCCAATTGCTCGCTCTTTACCACGCCGAGCTCCACTTGCATGTTGATGACACCGTACATAACTTCCGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCGCACCCAATCACGGGTGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.20,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.37 Confidence: HIGH] # Array family : NA // Array 2 1908857-1912946 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJHAQ010000001.1 Psychrobacter phenylpyruvicus isolate Psychrobacter phenylpyruvicus ACAM535, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 1908857 33 100.0 34 ................................. TAGCCAGCTCTGAAAAGGACTCAGGAGACACTAT 1908924 33 100.0 34 ................................. ATGAAGCTTTAACTGGCTCAAGCCAGCAGCAGGC 1908991 33 100.0 34 ................................. TCTAATGATATGCGTAGCCACGCGTTGTCCGCCG 1909058 33 100.0 33 ................................. GGACTACTATCGCTTATCTTGCGACAGCACGAG 1909124 33 100.0 35 ................................. ATATCTTTCTCCTCATACAAAGTAACATCTTTAGG 1909192 33 100.0 34 ................................. AGCCCCAGTATGATAGCCTCCAACAAAGCATCTT 1909259 33 100.0 34 ................................. ATCGTCCATAAACCTGTGGTTTAGCCAAAAATTT 1909326 33 100.0 33 ................................. CAACAAAGAGGATGTTACACAAGAAGCGTACGC 1909392 33 100.0 34 ................................. ATCACTAAGTGCTCAAGCTCAGCTAAGCTTTGAG 1909459 33 100.0 34 ................................. TTAACGCAAACATAACTTTATCCTCATTTGGTTG 1909526 33 100.0 34 ................................. ATCATTGTGTGTATTATAATAATATGTGTATTAT 1909593 33 100.0 32 ................................. AATTCAACCATACTGGTTGCAATTTAGTGAAA 1909658 33 100.0 33 ................................. TCATTTCAAGCTGACCCTACCGTTAGGATTGTC 1909724 33 100.0 34 ................................. CATGCATAGCATGCATGCATAGGTGTTTGACACT 1909791 33 100.0 33 ................................. TAGCAATTATGTCGCCTTATATCCACCCCCTGA 1909857 33 100.0 33 ................................. TTCGTTGGTAGAGCAAGCTCCGTCATAGCTGCT 1909923 33 100.0 33 ................................. TGCTATATCGTATTCGCAAGCATGGTATAGCCC 1909989 33 100.0 34 ................................. GTTATCATCACTCGCGCAGGCGGTGACATCTCGC 1910056 33 100.0 32 ................................. CTGGCAACCTGTAGGCCTTTACAGGCCATACA 1910121 33 100.0 32 ................................. TTTGATTTGAGTCTTTACAGCGTCCATATCGT 1910186 33 100.0 33 ................................. TAGCAGAGCAAAGCACTGTTAATCATATTGAGG 1910252 33 100.0 35 ................................. CCTTGAAAAATAACCCCATCTTCTTTGCACTACGG 1910320 33 100.0 34 ................................. TTTTTGGATGTTAGCGACAATACCAGCGGCTTGT 1910387 33 100.0 32 ................................. ATTGAACCTTGAATGGCCACCAACAGCAGCAG 1910452 33 100.0 34 ................................. AGTACGGATCACAAGATGATGACGAGCCGATCCC 1910519 33 100.0 32 ................................. CAAATGGCCATATAATCAAACCGCTGCATAAA 1910584 33 100.0 33 ................................. AAGGGTTATTTTAAGTTTTTTTTGGGCTTTGAG 1910650 33 100.0 32 ................................. GGACACCTTAAAAGAGTTAGCAGACAAGATTA 1910715 33 100.0 34 ................................. TAGTCCAGTCTATTGGGCTAGTTTCCACTAGGGA 1910782 33 100.0 32 ................................. TTCTTGGACGTGAGCTAGTATGTAAATACGAG 1910847 33 100.0 31 ................................. TTACCGCTGCCTTTCGGTTTTGTGCCATCCT 1910911 33 100.0 34 ................................. AACAACAGTCGAACAACAGATAGCGAAAACCGAA 1910978 33 100.0 34 ................................. GTTGAACTCGGCTTGCACTGTATCAATGCGGGTC 1911045 33 100.0 33 ................................. CTTGTCCTGCTCCACAAGCTTATCCCGTAGAGC 1911111 33 100.0 34 ................................. ATCCTTAAAACCCTTAACATTCAGCTGTTGCATT 1911178 33 100.0 32 ................................. TTAGTTAAGCTTGCTAATTTTTTGCGTACTAA 1911243 33 100.0 35 ................................. CTCTTTGGTCATACCGATTTGGCGTATTCTGCCGT 1911311 33 100.0 33 ................................. AAAGCCATTTACAAGACTAAAATAAGCGACATA 1911377 33 100.0 34 ................................. GTACCTTTGTTTGTATTGCCAGTATGGTAGATTT 1911444 33 100.0 33 ................................. GTAACGTGCCTTTAATTCATCGTTGAGCATTAT 1911510 33 100.0 32 ................................. AGATGCTGACTGGAGTTACGGCATAACCCCAT 1911575 33 100.0 34 ................................. TCCTAATGGCTGACTCGTAAAAGTCAGCTCTAGG 1911642 33 100.0 34 ................................. ATCATTTGACTTTAGGTAGTCTTTGGCTTTAGCG 1911709 33 100.0 36 ................................. ACCAACATCATCATGTATATAAACGTTGCAATCATC 1911778 33 100.0 34 ................................. AAAGTAGAAGTAACCTGATTTACTATCGCTATCT 1911845 33 100.0 33 ................................. GTGTGAGATAATTTGAAGCTCTAAAACCTCGTG 1911911 33 100.0 36 ................................. ATCGTTGAGCGTGATAGGCATTGGTATGTCGCCATA 1911980 33 100.0 35 ................................. GGACGTTACAAACGAAACCGGCGTCGGCGTTGAAT 1912048 33 100.0 34 ................................. AGTCGAACCAACAAGCCGGCCGCGAACTGGGCAA 1912115 33 100.0 36 ................................. CATACTGCCTCATAGCCTGCTGCTGCATCTGTTGCG 1912184 33 100.0 33 ................................. TGACTCTCTTATTTTTTTAGTAAGCGGCGGAAT 1912250 33 100.0 34 ................................. ATCTTGCTATCGCCCATCACACCGTCACGATATG 1912317 33 100.0 33 ................................. GGCGCACACGACAACAGTAATCGTGTCGCATAT 1912383 33 100.0 32 ................................. TTAGATGCTGAGGGTACTTTAGATGAGGCTTA 1912448 33 100.0 33 ................................. TCTTCATCAACAGTGTAAGCAGCACCAAACTCT 1912514 33 100.0 35 ................................. AGCTACATCAGATAGCGCCATACCGATTTGGTCAG 1912582 33 100.0 33 ................................. CAACCTGTAGTTGGGGTTTCTTTAATATCAGTT 1912648 33 100.0 33 ................................. TCTAAGCTGTGGTTGCTTTTTTAGCATCTGCTA 1912714 33 100.0 35 ................................. GTAGTAATCAGCTTCAATCTCGTTAAACTTATAGC 1912782 33 100.0 33 ................................. AAACATAGCTTTTTCACAAGAGTCCGGCTAGGG 1912848 33 93.9 33 ......T..............T........... TAGCAAAGCTTGCACGTAAGCAAAAAACTACTT 1912914 33 87.9 0 ...A..T..........A...A........... | ========== ====== ====== ====== ================================= ==================================== ================== 62 33 99.7 34 TTCGCACCCAATCACGGGTGCGTGGATTGAAAC # Left flank : CATGCGCGTCCACACATAGGTGTATTTTTGTCGTGTTTCCGCCACGACTGAGTCCAATTGCTCGCTCTTTACCACGCCGAGCTCCACTTGCATGTTGATGACACCGTACATAACTTCCGTCAATGAATACCCATTCTTTATCAGTTTGTGTTCGTAGGTCAAAAAAAAATTCTGCCATAGCCCTTTTTTAGACCATCGATTAAAGCGGTTATAAGCGGTTTTCCATGAACCTAGTTCGGTAGGTATGTCTCGCCATGGAGCACCTGTTCTTAGTTTCCAAAGTATGGCTTCCATTACGGTGCGGTCATTCTTCCATTGATGGCAACCGTGAGCCTTCATTGTTGTTTGTAGTTGTTCCCATATGTTGTCAGTTATTACTGTTCTCGCCATGGCTTGAGTTTCCCTATATTTTGTTGATATATAGGATTAAAATAAGGCTTTACTGTATTTTTCAAATTAGGGACACGCCCTAGTAATTGCAAGAGTTGCAATGTGGGTAT # Right flank : CATAAGGAAAAATGAAATGAAAATGAAAATATATTGTAGTAAGTTCGGTAAGTTGGTTGAAGCTCATCCGTTTGGTGGTGGCGAGTTAATACATTTAGCGAACTGGATTGATGACTTGAAATGTGACGTGAAAACAAGTGCTGTATTCGATCAAGGCTTACCGACGCTTATACTTACTAAGGGCGACGATGTAATAACTTTAAAGCCGAACCAGTGGTTGGTACGTGAAGATGAAAATGAATTCAAAGTAGTCAGTGCGGAACAGTTCCCTAATTTATACACGCTACACCAACCGACAGAAGGCGAGTGATATGGATGTTCAAAAATCAAAGTCATTACTATCGCATAGAGGGCCTATGAGCAACGTTTAAAATTGCACACCAATTTTGGCTGTGCAAGGGAAATCCTTTAAATAGAACTTCCAAAGCCGATAGCTTGTAGAATTTGTTCCGAGAAACAATTGCCTCTTATATTGCAGAAAAAAATTATGTATGTTACTC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCGCACCCAATCACGGGTGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.20,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.64 Confidence: HIGH] # Array family : NA //