Array 1 9386-7100 **** Predicted by CRISPRDetect 2.4 *** >NZ_SHQJ01000037.1 Bifidobacterium longum subsp. longum strain MCC10030 contig0037, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 9385 36 100.0 29 .................................... TAGCTATATAATATATATATGCGCACTGG 9320 36 100.0 28 .................................... TTCGCATACTTGATGCAGTAATCAACGT 9256 36 100.0 28 .................................... TCCATGACCGCGTCCATCACCTCATGCC 9192 36 100.0 28 .................................... CGTTCCCCAGTGGGGTGAGTGTGATGCC 9128 36 100.0 29 .................................... ACCGATTGCAACGCGAATATCCCGGGTAT 9063 36 100.0 28 .................................... TCCTGCAACTCCTCCTTGCGGGCCTTCA 8999 36 100.0 28 .................................... GTTGTTCCGGGAACAACTGGGAACAACT 8935 36 100.0 28 .................................... CTTGCCTCCGTTCTGCATCCAGCTGTCG 8871 36 100.0 29 .................................... ACGCGGCGAAGAATCTTGTTATCGCGGCT 8806 36 100.0 29 .................................... GTCGCACGTGGCATGGCATGTTGGCGAAC 8741 36 100.0 28 .................................... GCCAACGGCGCGTACACCGGCAACTTCA 8677 36 100.0 28 .................................... AAGAAGACCGCGACTATCGGCTACCAGG 8613 36 100.0 29 .................................... GTGGGAATCCTGTTGAAGTGGGGTGAGGA 8548 36 100.0 28 .................................... AGGAGGTTCAACGCAAGTATTTCACGGC 8484 36 100.0 28 .................................... AGTCATTTGGTGTGCCTTTCACGATGAT 8420 36 100.0 28 .................................... TTGCATACGATGTCGAATATCCCCTCTC 8356 36 100.0 28 .................................... TGTCCTGCATTTCGTGCAAGACCGCTTC 8292 36 100.0 28 .................................... TGTACGCTGACGAGTTTCCTGTTGCTCA 8228 36 100.0 28 .................................... CCAGTTCGACGCGTAGGCGCGAGTGTCC 8164 36 100.0 29 .................................... CCCTTGCGCGTACTGTGCTTGTAGGTGGC 8099 36 100.0 28 .................................... CGTAAACCTTGTTAAACAAGTTGTCAAA 8035 36 100.0 28 .................................... CTGTGGCTTCTTCACCTTCGGCACCTTC 7971 36 100.0 28 .................................... TTTTCTCCAGCACACGGACGTAATCGGC 7907 36 100.0 29 .................................... CCAAGTGTGGGCCGAACTCAACAACTAAG 7842 36 100.0 28 .................................... TCAATTCCGCGTCAACTTTCCAGCACAT 7778 36 100.0 29 .................................... CGCCTCGCCGCCGCACGAGAACGAGTCAA 7713 36 100.0 28 .................................... TATGGTGTAGCCAACAACAAAAACAAAC 7649 36 100.0 29 .................................... CCCTTGCGCGTACTGTGCTTGTAGGTGGC 7584 36 100.0 28 .................................... TATGGTGTAGCCAACAACAAAAACAAAC 7520 36 100.0 28 .................................... CGGGTAACAAGGTGGACATGCTCATTGA 7456 36 100.0 29 .................................... TGTTGAGGGGAACCGTATCAAACCTGATT 7391 36 100.0 28 .................................... TGGTTTCCGTGCCGCATTGGTCGCAGTA 7327 36 100.0 28 .................................... TAGAAGTGCAGATTCCGTTCCTGCAAAC 7263 36 100.0 28 .................................... TCGTCGATGTGCTCCAAGAGGTTTGGTG 7199 36 100.0 28 .................................... TATTGTTCGGGTGCGATGGTGATAATCA 7135 36 86.1 0 ..............................TTG.AT | ========== ====== ====== ====== ==================================== ============================= ================== 36 36 99.6 28 CAAGCTTATCAAGAAGGGTGAATGCTAATTCCCAGC # Left flank : ATTCAACGGTTCCGGTTTGACTATACCGAGCTCATTGAATGATTTTGCGCAGCAATTTGGTTTATATTGCGAAGGCAAAATCGACAGGTTGCAGGTTCCCGAATATGTAGGCGAGTCATGAAACGCGATGAGGACAGTGGCGGCATGTGGTGCTTGGCGATGTTTGATTTGCCGGTCAAGACAAAACGGCAACGGCATGCTGCAACTGTCTTTAGAAATATGTTGCTCGACATGGGATATGGAATGGTGCAGTATTCCGTATATGTGCGGTATACGCCTACGCAATCGGGTAATAGGGCGACGGTCAAAATGATTAAAGACAATCTGCCAGCTAATGGCTTAGTTAGAATTTTGCATATTAGCGATCATCAGTGGTCCACGGCGGCCCGATTTTCTTCTGGAAAACGTGAGATTGAGGAAGAAACGCCTGACTTTCTCACGCTTTTTTGAACGTAGGAGAGTCTGAAAAGATTGAAAAATAGCCCTTCTTGATAGGCTAT # Right flank : GCTGGAATGCTTGGGTTGATTTGGCTGATTTAGCTGTGATGGCCGCTGCGGGAATGGCCCTTGCGCGGTTGGCGGCAGAGGTTGCGGCGCGGATTGCGGCACTGATTGTTGTGCCAATTGCGTCTGCGGTGAAAAATATGGCGACGGCTGTGTCTGACTGTTTATCGGCGGATGTTCCGGCTCAGGTTGTGGCTGGAATGGAGAATATTGCGGTTGCGCCATTGTATGCCCCTGCCCCTTCATTGCCATTTCATTGGCGCATGGCGAGGGCTGAAAACCAAGATGATGAATCCTGCATGAGTTATCCGTGATTCCTGTACGTTGGTACAGCGCGGAAGGTTGAGCAGCCGACATATGCAGGCTTGTCGGTTCAACTGAATATCTTTAAACTATGACTTCCAATACCCTTCGTATGTCAACCATGTTCCTGCGCACCCTGCGCGAGGACCCCGCTGATGCCGATGTCGATTCAGCCAAGCTGCTGCAGCGCGCCGGCTATA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAAGCTTATCAAGAAGGGTGAATGCTAATTCCCAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.30,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //