Array 1 1076452-1078734 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP055509.1 Klebsiella pneumoniae strain RHBSTW-00472 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1076452 29 100.0 32 ............................. TTTCTTGATGCTATGTTGAAGAAGATGAGGGG 1076513 29 100.0 32 ............................. ATTTGGCAGAGGCTGGTCGTGTCGATGTCGAA 1076574 29 100.0 32 ............................. ATACGTCTGTTACTTTGCTATTATTAGAAAGC 1076635 29 100.0 32 ............................. TTTCCTGTACTGTTCAGTTGCATAGTCCAGCA 1076696 29 100.0 32 ............................. AAATCGCAACGCACATCGAAGCCGGAAAAGTT 1076757 29 100.0 32 ............................. AATACACGGGCGTTCAGGTTAAATATTTTGAC 1076818 29 100.0 32 ............................. TGTCATACGACCTGGTAAACGACCGTTCCATG 1076879 29 96.6 32 ..A.......................... GTTTTGTCGACAAAGTACGTCTGCTCTCTTGA 1076940 29 100.0 32 ............................. GTTGTCAGTCAGGGAAAATCTATCCGCAGGGG 1077001 29 100.0 32 ............................. TGATTGTCGCTATACCAGCGCTCAAGGAAAAT 1077062 29 100.0 32 ............................. GTCAGATCACGTCAACCACGCTTGATTTTACC 1077123 29 100.0 32 ............................. CTCACTAACGCCGTTGCCTGCGATAGCTGATG 1077184 29 100.0 32 ............................. GTGATCGGCCCGGCAATGCGTGAGCTAATCAA 1077245 29 100.0 32 ............................. CGTTTAACGCAGTGCGAAAAATTACGACACCA 1077306 29 100.0 32 ............................. AACTGAATGTTCCAAATCCGGTTGGACGACCA 1077367 29 100.0 32 ............................. TTCAGCAGCGCGCTCGTCCCCCTCCTGTCGGA 1077428 29 100.0 32 ............................. CTCTACTACGATAACGGATCCCACGCGGGCTG 1077489 29 100.0 32 ............................. GCTGCCAGCCCATTCCGTAATTGCCTGTTTCA 1077550 29 100.0 32 ............................. CAGTAGCAGCCATCGCTGAGGTGAAGGGCTGG 1077611 29 100.0 32 ............................. GCGAATATAGGCATTAATGCTTTTAATAATAT 1077672 29 100.0 32 ............................. CTCCGTCACCAGTTCTGTGCTATCCGGCACAA 1077733 29 100.0 32 ............................. CTCGGTGACCGGCAGATCGTTTTGAAACACAT 1077794 29 100.0 32 ............................. CGTCTGGCGAGGTTTACGACGAGCTGACGTTC 1077855 29 100.0 32 ............................. TCACGTTTGCAGAACTCGCGGAGGAAGAAGAA 1077916 29 96.6 32 ..A.......................... AACGTAATTGGCTTACGGGGCGGTCGGCACAA 1077977 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 1078038 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 1078099 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 1078160 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 1078221 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 1078282 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 1078343 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 1078404 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 1078465 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 1078526 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 1078587 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 1078648 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 1078706 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 38 29 99.2 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGAGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //