Array 1 596843-593645 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE150450.1 Actinomyces sp. HPA0247 acAqT-supercont1.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 596842 28 86.2 32 ...........TC.-.............G GCCCACGCCTCGTCCACCGTTACTAGGTGAAG 596782 29 96.6 32 T............................ TGTGTTCAGGGCCGCATAGCGCGGCTGTGCAT 596721 29 93.1 32 ........T...C................ CTGGTTACTGTGCCTGACTTGGAGCGCCCGTA 596660 29 93.1 32 ..........T..............A... TACGCGGCCCAGCTCATCACGAGCAATATCTC 596599 29 89.7 32 .......T........T...........T GCGCCGTGGGCGTCGGCTGTCTGTTCCATGAT 596538 29 89.7 32 ..........T..A..............G GTTATCACTGGTAACTTGGCGGCGCGCGTGCA 596477 29 93.1 32 .......T........T............ AAGACGCTGATTGTTGCGACTGCGCAGATTTA 596416 29 82.8 32 ..........A..C..T....T......G AAGTACAGGTAGTTGGTGATCGCGTCGGCCTT 596355 29 93.1 32 .A......................C.... CAGGGCCGCAGCGTGTCCAGGCACACGGAACA C [596346] 596293 29 96.6 32 ........T.................... ATTGCCGGGCCCACGCCCTCCGCGAGCGCCAT 596232 29 100.0 32 ............................. GTCGGATTAATCGCGGCGGTGAGCGCGGTACC 596171 29 93.1 32 ................T...........G CTCGGCTACCTCTCGGAGGACGGCTTCGAGAA 596110 29 96.6 32 .........................A... GCGGACAAGCTCGGTGGACTGACGATTGAGAC 596049 29 96.6 32 ........T.................... GTCACGGAGCGCTCCGCTTGCGGGTAGACGTC 595988 29 100.0 33 ............................. TCCGCGTAGCACCACGGGGTAACGACGTAGGCG 595926 29 89.7 32 ........T.......T..A......... ACGTGGTACGGCTTCCAGCAGGTGCTTGATCC 595865 29 100.0 32 ............................. TCCACCGGCAGGGCAGCCCAGTGCTCAGTAAG 595804 29 96.6 32 ............................G GACCGAGCGCAGAAAATCAAGCTCCTGCACTG 595743 29 96.6 32 ............................G GGCCGCAAGACGGACTGGGCGGCGACGTGGCG 595682 29 86.2 30 ......................A..A.GG TACTGGCCGACTGGTGGTCAGGATCATGAC 595623 29 89.7 31 ........T.T.....T............ TCGCCTTGACCCCAGGGGGTGACGATGAAGA 595563 29 89.7 32 TG.....T..................... ATTCGAGCGGCTTCGCTCGTCGACAGCAGGTC A [595559] 595501 29 89.7 32 .......A...A.............A... AGGGCGTTCAAGAACTCCTGCATGTCGCTACG 595440 29 93.1 32 ........T.T.................. GTGGCCTGCGTGGGCAGACCAAACAGAAGCGT 595379 29 93.1 32 ........T..............C..... GTCTTTTCGACGTCGCGGGCGATCTGCTTGAT 595318 29 89.7 32 ..............G..........A..G CGCTGCGACGCAGCAGCCACGAGAAGCTGCTT 595257 29 82.8 30 ..........T...........A..A.GG TACCGGCCGACTGGTGGTCAGGATCATGAT 595198 29 89.7 32 ........T.T.....T............ ACGTGGTACGGCTTCCAGCAGATGCTTGATCC 595137 29 93.1 32 ..........T..............A... TGTGTGCGGGTGTTTCCTTCACGGAATGAGTG 595076 29 89.7 32 ..............G.A...........G CCAACGGGTGCGCCCGCCGCTCCTTCGCGCAC 595015 29 93.1 32 ..........T..A............... CACCATGGTTGCCAGCTCCCAGCCTGGGAATC 594954 29 96.6 32 ............................G GTCTCGAAGTACGGGGCGGATCTGGTCTCGAA 594893 29 96.6 32 ............................G CCAACGGGTGCGCCCACCGCTCCTTCGCGCAC 594832 29 93.1 32 ...............A............G ATTCCCAGCGGAGTCCAGTCCGCGGGGAGTTC 594771 29 96.6 29 .......T..................... TCGCGAGCTTTGCGTTCGACGCTATCTGC T [594745] 594712 29 89.7 32 C.G.........................T GCTGATCGGCGCGGTCGGCGGGCGCTGACGCA 594651 29 93.1 32 ................T...........G CGCTGCGACGCAGCAGCCACGAGAAGCTGCTT 594590 29 86.2 32 ..........T.....T....T......G GTGACAGCCCAGTAATGCAGCTGCTCGAGCTA 594529 29 89.7 31 ..C.......T.................G AGTACCAGGAACAAGGCACCTTGCTTGGGGT T [594503] 594468 29 96.6 32 ............................G GGCGACCCGACCGGTAAGGTCGCCGAAACCAC 594407 29 93.1 32 .......T....................G GGAGTCCTCATGCTGACTATTTCAATCACGAA 594346 29 96.6 32 ..........T.................. GCCCGCGTAGGGTAGGCGCTTTGACTCGAAAT 594285 29 89.7 32 ...........A....T...........T GGGACCGAGCCGTTTAGGGACTGCATGGCCGT 594224 29 100.0 32 ............................. TGCAGCAGTCCGCCGGCTGCCTTCACGGCGTT 594163 29 89.7 32 ...........A....T...........G CCGAGGCTCAGCCAAGCCTCGTTGAATTCCTC 594102 29 89.7 32 ........T..A................G GACATCATGGATCCTGTAGCTATTCTGCTTCA 594041 29 100.0 32 ............................. GTGGTGGGTGAAGGCACCTGTCCCTTCGCTCT T [594033] 593979 29 100.0 32 ............................. CGCTTGGTAATTTTGTGGCAGTCGTCCGTCCG T [593971] 593917 29 96.6 31 ......G...................... TGACACGGGAGTCAACCCCCTACACAGTCAC 593856 29 89.7 32 ...A..........G.............G TTGATGACGCGGGATTCGCCGCCGGTGTCGTC 593795 29 93.1 32 ................T...........G CACTGGCAGGACTCGTTTAATCAGATGTTGTT 593734 29 100.0 31 ............................. GCTCTGTTACCAGACGTCCTACAGTATCCTC 593674 29 86.2 0 TG.......................T..T | C [593670] ========== ====== ====== ====== ============================= ================================= ================== 53 29 92.9 32 GTTTTCCCCGCGTGAGCGGGGATGAGCCC # Left flank : CCTTCTTGGCCTACTTCGACACCGGCGGAGCCAGCAACGGCCCCACCGAAGCCATCAACGGAATCATCGAACTAGGAAGACGCACCGCCAGAGGCTACCGCAACCCCACCAACTACCATCTCCGAATGCTCCTCATCGCAGGAGGCCTAGATGCCTCCAACCACACTCAACTCTGAAGAGCCATTAATGGTGTTGAACGCAGCATTGCGGAGTTTAAACGCGATGGGCACAGGGTAACGCTTGCAGTTGCAACTTTTGAGGGCGTGCTGGAGGTAACTGATCCAGTGGCGCTGCGTCATGCTCTCGTTAATGGAATTGGTAGGGGCAAGGCCTACGGCTGCGGTTTGATGACCTTGGCTCGGCCATGACTGCGCATGTGTTCCTTGTGGAGGAATGTAGAGTGTGATTGGCGCGAGTTGGGGTTGAATGAGGAGGAGATGTTGCCCCTGTGTATTCGGGGGGTTTCCAATTGGCGACATGAACCTCATCAATACACATCA # Right flank : TATATCGAAGGAGATTGTTGATTGAATCCTAGGTTTTCCCCATGAGAGTGGAGTAGTGTCCCGCATAGTGGTGTAACCGTGTGGTGGTCGGCCCGTTTGATATGGGTGCGGTCACCGTGTGATCCTTCGAGAAAGCTCTCTACTTCTGACTCGAAATGATTTGGAGGCACAACGATGACCGCTCCTCATATTATCGACCCTGCTGGCCTGCTTGGCGAGGCGTTATCCCAGGCGTCCCCGGATTTGATGCGTTCCCTGCTCCAGCACGTGATTAACGCGTTGTTATCAGCGGACGCTGACACCGTGTGCGGGGCCCAGTGGGGCCAACAAGACCCGCAGCGTCAGACCAGGCGCAATGGGTATCGCTACCGGCCCCTGGACACCAGGGTCGGCACCATTGACGTGGCGATCCCCAAGCTGCGCTCAGGAACCTACTTTCCAGAGTGGTTGTTGCAGCGCCGCAAACGCTCCGAAAGCGCCTTGATCACAGTGGTCGCTGA # Questionable array : NO Score: 5.07 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.16, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCCCGCGTGAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGTGAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [29-28] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //