Array 1 141435-140806 **** Predicted by CRISPRDetect 2.4 *** >NZ_JSEH01000007.1 Desulfovibrio sp. TomC contig00007, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 141434 28 100.0 32 ............................ ATGCTCGGAGGTGGCTCATATCCTCCTGGATG 141374 28 100.0 32 ............................ TCGCGCACGTAGACCGTGTGGGTGGAGCTGGT 141314 28 100.0 32 ............................ AGACGTGGTCACACCAGACCACACCAGACCAC 141254 28 100.0 32 ............................ ACAGTGAACGCATGACGCAGCAAGAGGTGAGC 141194 28 100.0 32 ............................ GGACACCATCGAGTGGCAAGAGGCCGGCGTGT 141134 28 100.0 33 ............................ ATATGAGACGACCAAGCAAGCCGCCATCGCCGC 141073 28 100.0 32 ............................ TACCCCGACGTCAGGCCCAAGCTCGTCAGCGG 141013 28 100.0 32 ............................ AAAATAAAAGGCCGCCCGGACAGCTAGGCAGC 140953 28 100.0 31 ............................ AGTGCGGGACCGGCGTTGTTGAGTGTGGATG 140894 28 89.3 33 ...T...A........A........... ATGCTCGCAGCGCAGGCAGGGCGCAGCCTCCAT 140833 28 89.3 0 ...........TA.......A....... | ========== ====== ====== ====== ============================ ================================= ================== 11 28 98.1 32 GTTCACTGCCGCGTAGGCAGCTCAGAAA # Left flank : CAGGCCACTGCCGTGGTGCCTCTGTAACCCTCCCCTAAAATAGGGCCAGCGAAAAGTTGAGATTTCTGGCAAACCCGCCCCAGGAGGGAGCGATGCGGAAATCTCGATTTTCTGAGACGCAGATCGTCAAGATGCTCAAGGAAGCTGAGGCAGGACGTCCTGTCGCGGATATTTGCCGTGAAAACGGCATCAGCGCGACCACGTTCTACAAGTGGAAGACCAAATACGGCGGCATGGAAGCATCCGATGTGCGACGTCTCAAGGATCTTGAAAGCGAGCACAGCCGCCTCAAGCAGATGTTTGCCGAGCTGAGCCTGGAGAATCAGGCCCTGAAGGATGTGATCGCAAAAAAGTTGTAAGGCCAGACGACAAGCGAGAGTTGATCACATACGTCCACATTGTGCATGGACTGAGTCTTCGGAGAGCCTGCTGTGTTTTTGGTCTGAGCAGGTCTGTGTATGGCTATCAGGACGACGCTAAGCGTCCGGGCCTGTGTAGGA # Right flank : CACTCCTGCTCTGCCCGGTCGGGTCGAGAAGGGTTTTTCCCCCGAGGCCATCCGCATCAGGGAAGACTCCGTCTCACCGCAACAGACGACAGCGCCGCGACGAAAAGCCCTGCAAGCGTCAGCTGGGTGAAGATCCAGGGGAGGGCATTGACCGGGGCGAAGCACTCGTTCCCACTCTTGACCCAGCGTGTGCGCCGCATGCGGCTTATCGCCATGGGCCAGCCCGGTTCAATAAATCAGATACCGTTGAGCTGTTTGAGAATCGGTTGGGTCAGATCGTCAATAGGAACAGTTTTTCGAAAGTCTTTTCCCGGGAAGCTGTTAAGAAAGGTCAAAAACGCGCTGTCGACATTGGAAAAGACCAACGCGCTAGGCTGCAGGTCGCTTCCTCGGCGCATTGTCGCTTCTTCGTCAGACGGGATGATGAGCTGGTAGTTGTTGGTGGTAGCGAAACGGAGGGTGAGGCCACGAATCGTGGAGATAAGCGGGGTCACCATGGT # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCGTAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCGTAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //