Array 1 34-3803 **** Predicted by CRISPRDetect 2.4 *** >NZ_BAZR01000011.1 Paenibacillus sp. JCM 10914, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 34 32 100.0 34 ................................ TCTTTAACGTATGTACCTTGAGCGGTTTCTTGCT 100 32 100.0 34 ................................ GTCTAAGTCTGGTCCGATTCAAGGAACGGTCGTA 166 32 100.0 34 ................................ TCCAGAAATCCGTTGTAAGGCCTCATTACTGGCA 232 32 100.0 37 ................................ CAGACTTCGTATTTGCCATTACCGCCACCCATGCCGC 301 32 100.0 35 ................................ AGGAGGGGGCGAGGGTGAAGGGAAATCTAAAAAAT 368 32 100.0 36 ................................ GGGTAAAGTTTGCATACACCCAAGAGCAAGCTGCAG 436 32 100.0 34 ................................ TTTGCGGCTGCTGCTGCTCAAGCAGAAACAACGG 502 32 100.0 36 ................................ ACATACTCACTTGAGTCACATATCAATCCGCGCTCG 570 32 100.0 35 ................................ GTCAGGACTTACGAGACCAGAGAGACGGGAATCCT 637 32 100.0 36 ................................ AGCATGTTCAGTAGTTTTTTCACTCACTTTTCTAAA 705 32 100.0 34 ................................ CTCAACTGGAAATGTGAAATTCTCGTTGCCCTTG 771 32 100.0 35 ................................ AAGCACGGCCTTACGGTTATGCAGTTCCCGGGCGG 838 32 100.0 35 ................................ GATAAGACGGTCGCGGAACAATACGATTCCTTTGC 905 32 100.0 35 ................................ TCCCCTGGTTTGTACCAATTTTCTGTGTGGATTTG 972 32 100.0 34 ................................ CTTAAGTCGGTCATAGAGGGTCCGGTAATCGATA 1038 32 100.0 35 ................................ ATGCCGATGAAACCACCGACAGCGACTCACCAGGA 1105 32 100.0 33 ................................ AAGTCGGGTGGTGATATGAATCATGTACGGAAG 1170 32 100.0 34 ................................ TTGGTCGGGCAGTTCCTGCGGGGAAAAGATCATC 1236 32 100.0 34 ................................ ATCTGATTTCGCATGTCACCAAACTGTTGCTCAA 1302 32 100.0 33 ................................ ATATCAACCTCTTGCTTATCAAGCCAACCGTAG 1367 32 100.0 35 ................................ AGTATGAGCAAGCGCAAAAGATATTGGGAGAAGCG 1434 32 100.0 34 ................................ TTTTGATCATACCACATAATGTTAAGTTAGAACA 1500 32 100.0 34 ................................ CTATGCACCCCTATAGTCATTAGATTCTCTATTC 1566 32 100.0 33 ................................ GAGATATCTTGGTTGACAGTGGCCTGGAATTCC 1631 32 100.0 34 ................................ TCACATTCATCGCTACCACCTCAATTTTCGGTAA 1697 32 100.0 35 ................................ ATGTCATGAATAATTGTATTGATGGGTTTATAAAC 1764 32 100.0 32 ................................ CACGGTTAGCCACGTAGAATGCAAGTGGAATC 1828 32 100.0 35 ................................ GTGCCATCTATACGTTCACCTCCGTTAGCATCGGC 1895 32 100.0 34 ................................ AGGAGCAGTATCTTGCGACCTTCTGACGCTGGAT 1961 32 100.0 34 ................................ TTAATACGGGTAACGGTCCGATCCGGAGCAACTT 2027 32 100.0 37 ................................ AAGGATACCAGCCCGGCGACATGCGGGTAAAGCTCCA 2096 32 100.0 35 ................................ TCCCCTGGTTTGTACCAATTTTCTGTGTGGATTTG 2163 32 100.0 34 ................................ CTTAAGTCGGTCATAGAGGGTCCGGTAATCGATA 2229 32 100.0 35 ................................ ACCCTCTGTCTGCTGCTCCTGTACCTTTGGCATAG 2296 32 100.0 35 ................................ ATGCCGATGAAACCACCGACAGCGACTCACCAGGA 2363 32 100.0 35 ................................ TGCCCTCGGTCGTTTACATTAAACGGCTTGAGCGC 2430 32 100.0 36 ................................ AGTCCAAGATACTTAGCGATCCCAACAACGTGACCC 2498 32 100.0 38 ................................ GTTTGTTAATTTACCAGAGATATCAATTGTTTTTGCCA 2568 32 100.0 36 ................................ GTCTAATGCACTAGCCCAGCGTTCCAAATCACCAAG 2636 32 100.0 34 ................................ TGACGTATCAGCAATAACCTTTTCTTTGGAGTAC 2702 32 100.0 34 ................................ AAAAGGTGATAGGAGATCCATCATGCTAAAAGGG 2768 32 100.0 36 ................................ GCATCAGGCACCAATATAAACACAAATGCAATTGAA 2836 32 100.0 36 ................................ ATTTCAAACACACCACCGCCGAATACTTTCAGCGTT 2904 32 100.0 35 ................................ ATCTAAAAGAGCGTATTGCTTTTCCTCACGTTCTC 2971 32 100.0 34 ................................ ATTCGGCTCTCACCTCGTCTATGAACCGGTCAAT 3037 32 100.0 33 ................................ TGCTGACCGGTTAAGACTGTCTTAGGTATCTGG 3102 32 100.0 36 ................................ TTGGAGATGACGGTAAGATTGTGGGGCTTGAAGAAC 3170 32 100.0 34 ................................ ATCTGCTATCTCTTTGGCAGTTTGCAAGAGATAA 3236 32 100.0 33 ................................ CTCCCACGGGAAAGAGAAGACAAAACGAATGAT 3301 32 100.0 36 ................................ AAGCGATTGGTTTCGCAACTTGGCGAAGTCCTCTTC 3369 32 100.0 34 ................................ GTTGTAGCGCGTGACATATCCGACATGTCTAGGC 3435 32 100.0 35 ................................ AGTAGTATTGCAGGGTATATAAGGATTCGTATATA 3502 32 100.0 33 ................................ GCAGCATTAGCGTCGGCATAGAGGAGCGCACTC 3567 32 100.0 36 ................................ CCGATCCGAAAGCCGGGGGATACATCACAAGGAAGA 3635 32 100.0 36 ................................ CAGTACATCGAGTAACAGAGGTAAAATGACGTAATC G [3652] 3704 32 93.8 36 ........T.....T................. AAGCTTTGATATGGCGCTGCGTGACATATGTACCTT 3772 32 84.4 0 .........................A..TGCG | ========== ====== ====== ====== ================================ ====================================== ================== 57 32 99.6 35 GTCGCACCCTGTATGGGTGCGTGGATTGAAAT # Left flank : ACCGGAATACTTTCAAGCCGTATGGAACGGAACG # Right flank : GTATGGTGATGCGTATGAACATTTCGTTTCATGAAGTGATCACCTTCGGGATTTCCCGTATGCATTACTGACCTACATTCATAAAATACGAAAATAATCCACTCCTAAGGTTTACCGTCTAAGTGGGTAATTTTTCTATGCTTATCATTCCCCTCTGTAGAGCTCAATAACGCAGCGAATATCATCCTTCATAACGATGGTTGTATTATTAGCATACAACCTCCTCAACAAAACACAACCCCAACCCAAAAAAACAAAGAGACCGCGCTGGCGTACCTTCTATAATGTAGGTTATTAGACATCGAGAGGGCGTGATGGGATGAAGCGCGACGAATGGATGGACGGTGCCGGACTTGAACAGGAACGGCCGGATGCATGGATACATGCTGAGAAGCGAGCGAACGATCATGTCCTGAACCGGCGATTGGCTTGGTGGCGAGAGGCTCGCTTGGGGTTATTCGTGCACTGGGGGCCTTATTCGATGATGGGCGGAATATGGA # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCTGTATGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCTTGTACGGGTGCGTGGATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.50,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-18] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 46518-46947 **** Predicted by CRISPRDetect 2.4 *** >NZ_BAZR01000037.1 Paenibacillus sp. JCM 10914, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 46518 32 100.0 34 ................................ GCTATCAATAGGAACAATATTTTTCATAACGCCT 46584 32 100.0 33 ................................ TTTACGTTTTTAGTTGTTATTTTTTTGAAACAA 46649 32 100.0 35 ................................ CAACTTCAACCGGGGCAAAACATACTCAAGTACGA 46716 32 100.0 34 ................................ ATTTGTTCTCACCCCCTCCCGTTGAGTCATCAGC 46782 32 100.0 36 ................................ CTCAATAGAGGAAGGGGCGGCGTGGTTTGCTAGCCT 46850 32 100.0 34 ................................ ATCCAATGGACCACCACACTCCGAACATGTCGCC 46916 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 7 32 100.0 34 GTCGCACCTTACTCAGGTGCGTGGATTGAAAT # Left flank : CCGGGCCAGTTAATGTCCAACTACGTTGCCGGACCAGAAGGGACGATGAGCAAGATGTGGGCGGTGGGCATCAGCATGAAGCTGCTTACACCCGAATTGGTTCAGAACTATCGCAAACAGGGGATTCTCCCTTGGAGCTATTGCCCGGATGAAGAAGAGCAAGTAAGATACGCGCTGGAATGCGGCACTACGACGATGACGGTGAATGATCTTCTGCCCGCGATGAAGGTCAGGGAGGAGGAGGAGAGGAAGATTTAAATGTCAACCTATACGAGTATGGTCCTCTCATGGTGAATTGAGGTATTCGAGATTATAAGTTGTTAAACGTAGGGTGCGAATGTATAGCTAACATGTTTTTGCTAGGAGGTTCGCACCAAATAAATCTCAATTATTTACAAATATAATCAAAACTCAATACGTTTTATCGTGATTTTACGTTTTCTATATGATAAATTGTTGTTTATAACCGATTTGAACAGATACCAGAGGTTAAAATCGGA # Right flank : TTGGCATGGTACGGATTAAGCGCCGATAACGAATGTCGCA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTTACTCAGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.30,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [70.0-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.27,0.74 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 1-1428 **** Predicted by CRISPRDetect 2.4 *** >NZ_BAZR01000057.1 Paenibacillus sp. JCM 10914, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 1 32 100.0 34 ................................ GAAATTTTACAGACAAGGGGCACAGGTAGTATGG 67 32 100.0 36 ................................ TACCGCAATATCATCTATTGCCGCATCCCAACGAGT 135 32 100.0 35 ................................ ATATCAGCAGCAACCACCGCAACAGCAGATTGATC 202 32 100.0 34 ................................ CACCACAACCGTTTTGGTTTGACGTCATCGTCTT 268 32 100.0 34 ................................ ATATAGAAGAGGTGATGAAGTGCGCTTAGACCGA 334 32 100.0 35 ................................ ACGGTAAACCGCACCAGCGCCGTATCCAGGCCATA 401 32 100.0 34 ................................ ACTTGATCTTCAAGGCCTCCCTTAACGGTGCCAT 467 32 100.0 37 ................................ ATCCATGACCATCATTAACCCCTCCTATTTCTCTCTA 536 32 100.0 34 ................................ TGTATGGTCTTCGCTGAATTGATGCCATGAACTT 602 32 100.0 37 ................................ GCATACCGGCCTGCATCATTAGGCATTGGCTTTCCCG 671 32 100.0 35 ................................ CGGTAAATCCGGCGTCATTTCGAGTTCATATCGCG 738 32 100.0 36 ................................ CTGATCGATCCGACGAGCTGCTTCTCCGTCAATTGC 806 32 100.0 34 ................................ ATACTGGACTGCATCGCGGCAAGCTGTGCTTGCA 872 32 100.0 33 ................................ ATATCGAAATAATCAGACATAACGAGCTGTATG 937 32 100.0 36 ................................ ACGTACAAAGCCAACGCTCATGCTGCTGTCCGCATC 1005 32 100.0 34 ................................ TGCGTCTCGACGGATACACCGTCTATTGTTACCT 1071 32 100.0 32 ................................ TAGAAAGTAAAGGAATATCAAAGCGAGAACTA 1135 32 100.0 33 ................................ TTCGGATTTCTTCGGTTTGCTATGCGACTCATT 1200 32 100.0 34 ................................ CGTAATCAAACGCGGAACTATTTACTGCGAGGAA 1266 32 96.9 33 .....................A.......... AGTGACCATGAGCCGACACAGCAGGCCGTAGAA 1331 32 100.0 34 ................................ GGATATGAATACCGCTCACAGGAACTGGATGCCT 1397 32 90.6 0 ............C.................TC | ========== ====== ====== ====== ================================ ===================================== ================== 22 32 99.4 35 GTCGCACCTTACTCAGGTGCGTGGATTGAAAT # Left flank : | # Right flank : CGTTCACACCCTATAATTGAAGTATCACGCCAAGAACGAACTAAAGCATTGATCTCTCAACCGGATCAGTGCTTTTTTGTTGTTCAATAGTTAGCTGCAATAATTATCGAAATAACGTGAAAAGATGGAAAATTTGTAGAAGAAGAGGAAGGAAGTGGGGGTGGGTCTAGAGAATTATATTATATATCTTTAGGACTATGTTTGAGATGGGGGAATGGAGTTGCATTATATTGCCCATATCCGAGAATCAGATCAACAAATTCAAACGGTAGAACAGCATTTACTTGAAGTGAAGTCGCTTGCTGAGCAGTATGGTTCAGTCATTGGTGTGCAGCATATTACGGGGTTAGCAGGGATGCTTCATGATATGGGGAAGTTCACGGACAAATTCAGGAGTTACATCTTACAAGCCGTACAAAACCCCGATGCTCCTCCAAGAAAAGGTAGCGTTGATCACTCAACCGCCGGGGGACGCCTTTTATATCATTTATTCCATACCA # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTTACTCAGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.30,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0.74 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 1-839 **** Predicted by CRISPRDetect 2.4 *** >NZ_BAZR01000083.1 Paenibacillus sp. JCM 10914, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================= ================== 1 29 90.6 34 ---............................. TGGTGGATCTATGAATCTATCGCCATCGATTTTG 64 32 100.0 39 ................................ GGCATTATCCTAGGTACCTTTGTACTCAGGAAAGTTATC 135 32 100.0 35 ................................ CTCTCTAAAGGGGATGGATAAGGGCCTTTTACGGC 202 32 100.0 39 ................................ CATCCGTTATCTCTCCTTATATGGGGTATGGGGGTTAAG 273 32 100.0 37 ................................ GTCCTCCTTATCTTTGTCGCTAATCGCTTTGTTTCCG 342 32 100.0 37 ................................ CATGGGCGAACGCTTTGAGCGCATCGAGTGCGTCCCA 411 32 100.0 33 ................................ AGCTAAACCGCCTCCCGTACTTCGACTGTCTTG 476 32 100.0 33 ................................ GATCATGATCCCAGCTCCTCGCGTAGATTATCG 541 32 100.0 34 ................................ ATCGATGAGGATGACAGGGGAACGTTTTTCCCCC 607 32 100.0 36 ................................ AAACCAGTTCTTAGGGATGCTGCATCCACACCGTTT 675 32 100.0 34 ................................ AGGATTTGATCGAGAATGACGATGCCCCTTACCT 741 32 100.0 35 ................................ ATCTTGGCGTTGTGGTCATTGATCTTGTTCAGCGA 808 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ======================================= ================== 13 32 99.3 36 GTCGCACCTTACTCAGGTGCGTGGATTGAAAT # Left flank : | # Right flank : AAGAGGTAATGAACTTTGTCGGCAAGTTGGCAACT # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTTACTCAGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.30,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [0.0-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9,1.42 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //