Array 1 223874-224504 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_PNOV01000001.1 Streptococcus agalactiae strain sz_11 scaffold1_size229808, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                	Insertion/Deletion
==========	======	======	======	====================================	===============================	==================
    223874	    36	 100.0	    30	....................................	CGTACCATCTATCAATTTACCGCAAGCTGT 	
    223940	    36	 100.0	    30	....................................	CGTACCATCTATCAATTTACCGCAAGCTGT 	
    224006	    36	 100.0	    30	....................................	CCGATTATTTCCTACATAATACGCACGTTT 	
    224072	    36	 100.0	    30	....................................	AACTGTGTGATACTTTTCGTTTTTTTCTTT 	
    224138	    36	 100.0	    30	....................................	TTTTATAAGTGATAGAGTGTGCAACACCGT 	
    224204	    36	 100.0	    30	....................................	TTAAAAGATTTAAACTATCAAGCGTCAATT 	
    224270	    36	 100.0	    30	....................................	TTCTAAATGCTGGTGACTGCTTTGCATAAA 	
    224336	    36	 100.0	    31	....................................	TTGCTGCTAGACCCAAACAGTTTATTTTTAG	
    224403	    36	 100.0	    30	....................................	TGGTTATACATTTACTAATCCATCAGCATT 	
    224469	    36	 100.0	     0	....................................	|                              	
==========	======	======	======	====================================	===============================	==================
        10	    36	 100.0	    30	GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	                               	       

# Left flank :   TATATGCGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTATTTCATCATAGAAAATCCTGCTAGTGGTGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACGCGATGATGGTAAGTCATCATGGACAGCGTGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTTTTACACACGATGTCAGATATAATGTCAAGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACAGTACTGCACTAGGAATTGTAGAGATCAAAGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACCGTACCATCTATCAATTTACCGCAAGCTGTGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACCGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACAGTACTGCACTAGGAATTGTAGAGATCAAA
# Right flank :  CAAGCTAATTCTCATCTCACCGAGATGGATAGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCAATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTTCTTTGTCATTAATACTTGCAAGCTTACAAGGAAAGCAGTGGAGAACCTATCCATAATCAACTAACAGCTATG

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:58.33%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-4.70,-0.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [33.3-60.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.87,0.27   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
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