Array 1 66383-66883 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJFCI010000003.1 Enterococcus gallinarum strain MSK.5.2 JIMEBPCC_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 66383 36 100.0 30 .................................... GGATAGCAATGGGGTTTTGAGCAAAGAAAA 66449 36 100.0 31 .................................... ATCGCACAAAATAAACAGGACAAAGAAACCG 66516 36 100.0 30 .................................... GTCTGCTCCAGCGTGTGTCAGTGTCTCTCA 66582 36 100.0 30 .................................... GTTAAACCTATCGACGCTTCGGCGGCTGCG 66648 36 97.2 30 .........................A.......... AAAACTTTTTCACTTTTCCACCTCCCTTCA 66714 36 100.0 30 .................................... TTTCCGTTTGACTAGCTTGTCATTAGGACG 66780 36 100.0 30 .................................... AGTGAAATTTTTAGATCTGTTCGCAGGTAT 66846 36 88.9 0 .........................ATCA....... | GT [66879] ========== ====== ====== ====== ==================================== =============================== ================== 8 36 98.3 30 GTTTTAGAGCTATGCTGTTTTGAATGCTTCCAAAAC # Left flank : TCAATGATTGATAAACTTTCAGCTACGATAAGTGAATTAATCAATTACGAGCTTTTAGAATATGAGTTAGATTTAGAGAGTGACAAAATTACCATGATCGAATTATTCAAGTCGCTGGGAATTAAGATTGAAACAAAAAGTGATACAATTTTTGAAAAAATGATCGAGATCATTCAAGTATTTAAAAATCTCACCAAAAAACGGTTATTAGTCTTTGTGAATAGTTGTTCTTATTTAACAAAGGAGGAACTCGTTGAACTGAACCAGTACGCTTCCCTATATGGAGTAGATACACTCTACTTAGAACCAAGAAAAGTTGAGGGAATGAAACAATACATTCTTGATGAAGATTATTTCTTAGAAGTATGTGAGTGATATCCTTCTAATATTGTTCCTTGATAAATGAATAAAGTTCGAATTTATGAAGCATTCAAAGCTGAAATCTTGCTATGGATGAGTAGCGCGATTACGAAATCTTTCAAGAAAAATTTTTCTACGAG # Right flank : CGCGATATTTTTTCCAATAGACATATTATGGCTCTCCTTTCTTCTTACGATATAAGGAAATGTGGAGATTCCTGCCTCTATTTTAGAGGGGCTATTATATAAGAAATCTGTGAATTTAAGATATCAAATAACAGGATAGTGCGTAATAAGAAAAGCCAGTCATCTCGGACTGACTTCGCGGGGATAATTATGTTCGCAAGAGCTACTAAAGCTTTTGGTTTTAAGATATTTAGTGTTGGTGGGAAATCTACGGATTTTCTACCAACATTTTTTTTCGTGAAAATAAATGAACATTCCAAAAAGCATGATTTAAAACAATCCTTTGAAAGATGAGAACTAAACTACTCTTTGTCTTGAGATAATGTTCTAGTCCCTGATGTGAGCATGGTCGGAACAAACGTAATGATCTGGTCACAAGTCTTTTTACTCAGGAGTCTTTTCAAATTATAAATCACTAGACGAGCAATTTCTTCCACGTCTTGTTCAATATAGAAATTACA # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGCTGTTTTGAATGCTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTATGCTGTTTTGAATGCTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.20,-0.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //