Array 1 66383-66883 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAJFCI010000003.1 Enterococcus gallinarum strain MSK.5.2 JIMEBPCC_3, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                	Insertion/Deletion
==========	======	======	======	====================================	===============================	==================
     66383	    36	 100.0	    30	....................................	GGATAGCAATGGGGTTTTGAGCAAAGAAAA 	
     66449	    36	 100.0	    31	....................................	ATCGCACAAAATAAACAGGACAAAGAAACCG	
     66516	    36	 100.0	    30	....................................	GTCTGCTCCAGCGTGTGTCAGTGTCTCTCA 	
     66582	    36	 100.0	    30	....................................	GTTAAACCTATCGACGCTTCGGCGGCTGCG 	
     66648	    36	  97.2	    30	.........................A..........	AAAACTTTTTCACTTTTCCACCTCCCTTCA 	
     66714	    36	 100.0	    30	....................................	TTTCCGTTTGACTAGCTTGTCATTAGGACG 	
     66780	    36	 100.0	    30	....................................	AGTGAAATTTTTAGATCTGTTCGCAGGTAT 	
     66846	    36	  88.9	     0	.........................ATCA.......	|                              	GT [66879]
==========	======	======	======	====================================	===============================	==================
         8	    36	  98.3	    30	GTTTTAGAGCTATGCTGTTTTGAATGCTTCCAAAAC	                               	       

# Left flank :   TCAATGATTGATAAACTTTCAGCTACGATAAGTGAATTAATCAATTACGAGCTTTTAGAATATGAGTTAGATTTAGAGAGTGACAAAATTACCATGATCGAATTATTCAAGTCGCTGGGAATTAAGATTGAAACAAAAAGTGATACAATTTTTGAAAAAATGATCGAGATCATTCAAGTATTTAAAAATCTCACCAAAAAACGGTTATTAGTCTTTGTGAATAGTTGTTCTTATTTAACAAAGGAGGAACTCGTTGAACTGAACCAGTACGCTTCCCTATATGGAGTAGATACACTCTACTTAGAACCAAGAAAAGTTGAGGGAATGAAACAATACATTCTTGATGAAGATTATTTCTTAGAAGTATGTGAGTGATATCCTTCTAATATTGTTCCTTGATAAATGAATAAAGTTCGAATTTATGAAGCATTCAAAGCTGAAATCTTGCTATGGATGAGTAGCGCGATTACGAAATCTTTCAAGAAAAATTTTTCTACGAG
# Right flank :  CGCGATATTTTTTCCAATAGACATATTATGGCTCTCCTTTCTTCTTACGATATAAGGAAATGTGGAGATTCCTGCCTCTATTTTAGAGGGGCTATTATATAAGAAATCTGTGAATTTAAGATATCAAATAACAGGATAGTGCGTAATAAGAAAAGCCAGTCATCTCGGACTGACTTCGCGGGGATAATTATGTTCGCAAGAGCTACTAAAGCTTTTGGTTTTAAGATATTTAGTGTTGGTGGGAAATCTACGGATTTTCTACCAACATTTTTTTTCGTGAAAATAAATGAACATTCCAAAAAGCATGATTTAAAACAATCCTTTGAAAGATGAGAACTAAACTACTCTTTGTCTTGAGATAATGTTCTAGTCCCTGATGTGAGCATGGTCGGAACAAACGTAATGATCTGGTCACAAGTCTTTTTACTCAGGAGTCTTTTCAAATTATAAATCACTAGACGAGCAATTTCTTCCACGTCTTGTTCAATATAGAAATTACA

# Questionable array : NO	 Score: 6.17
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTATGCTGTTTTGAATGCTTCCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:63.89%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGAGCTATGCTGTTTTGAATGCTTCCAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-2.20,-0.80] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-7] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [65.0-66.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0   Confidence: HIGH] 

# Array family : II-A [Matched known repeat from this family],   
//