Array 1 857234-858588 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP076446.1 Limosilactobacillus fermentum strain L1 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 857234 36 100.0 30 .................................... TATGCTATGCAAAAGTTTCAACTTGGACTG 857300 36 100.0 30 .................................... ACGAGGAGGAACGAGTATGGAAAACCAAGT 857366 36 100.0 30 .................................... TGGGTAAGGGAATCCGGCTATATGACCCTA 857432 36 100.0 30 .................................... CCGTATCATCTCCATCGTGTGGAGAACGAT 857498 36 100.0 30 .................................... TCGTCAGGGACTTCCTCATCAAAAAAGATA 857564 36 100.0 30 .................................... TGGTGACAATCTACCAGCCAAATAATTCTC 857630 36 100.0 30 .................................... AATCCATTTCGTTATCGCGACAAAGATATT 857696 36 100.0 30 .................................... TATGGGCTTTAGCCGTACGAAGGAACAACA 857762 36 100.0 30 .................................... GGTTGCCTACCCGACGTTGTGGTGTAAGAG 857828 36 100.0 30 .................................... ACCCACGAGTTAAAGGGTTAGAAAGCATGA 857894 36 100.0 30 .................................... TAACACGAGCCATCGTTGTCCCGTCAACTA 857960 36 100.0 30 .................................... AAACGGTGGGACAATTTATGCACAACGGGT 858026 36 100.0 30 .................................... TTTAGAATTCCGTCAACATGTTTGTATTCG 858092 36 100.0 30 .................................... TATGGGCTTTAGCAGGACTAAAGCTCAGCA 858158 36 100.0 30 .................................... GACGAATTAAAAACCGGCTAGGAAAATTGC 858224 36 100.0 30 .................................... ACTTAACGCCAAAAGATCAGGCTGAAATCA 858290 36 100.0 30 .................................... CTACCCTAAGTACAAGGCCCTGATGGCTCA 858356 36 100.0 30 .................................... AGTGATGAAATCACCTTTCGACACTTCTGT 858422 36 100.0 30 .................................... TAGCCGTCCAATCTTAAAGGGGGTTCATTA 858488 36 100.0 30 .................................... GATCATCACGCCAGTTGATCCGTACTTACC 858554 35 86.1 0 ..........................-..TT..A.T | ========== ====== ====== ====== ==================================== ============================== ================== 21 36 99.3 30 GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC # Left flank : TAATCCAACCAAACTTGATAGTTACCAAACGTCACTCGATAAGATGATTGTCAAAAATCTTAGTATCGAGAAGCAAGATAGGATGAATGACCTTGCTCGTGAGATTTACTCAGAAATGCAAGATTCCCTGTTCGAATTCGATTTGCCATTGGAGGTCAGATATGACGAAAGTCTTTTGAGATTATACAAATATGCGAAAATCAAGTATTTGACGCAAGTAATAAGGCAACCTTATGGTATAATTGAAACCGATCTAAAATTACATCTCGAATTAAAGGACTGTCAGGTTCTTGGGTATTGTAATGTCGCTAATTACTTATTACCTGAGCAGATACAGGAATTCGCTACTCTTGTTGAGAAAACCGAATTGGCAGTTTTATTAGTAGAATTCTCAGAAAAGAGAGAAACTCTACAACAACTCAAACAGGATATTTACCGGATTGATCGGGACTTCGTGGACTGGCACGAATAGACCGTTAGTTTTTAATGAGAAAACAACG # Right flank : TTATAGACTAAGGGCGTTGCTGTTTTTAGCAATGCCTTTTTTAGAAGTGATGAGGGAAAGGTAAATGTTTTCACGTTGGTAATCTGACGGAAACTTTAGTGGGCGATGTGCTAGGATAGGGCCAGAATGATTGGAAGTGTTTGCCATGCAAATTGATCCCGAACGGATTCGCCCCGAACTGCGCCGAATCGGCAAGGTGGGGTACGCAATCAACCTGATGGCCAGCCCGCACGCCTGCAACGAATGGGACGAATAACGGCGAAGGCGAAAATGCCCATTCACTCGCGGCGGGTGATCAAACAAGACGTTTGGATTGAACGCCCTGACCATAGCAAGCTTCGGCTGGCTATTTTCCGGGCCAAGCAAGTTGCTACCAAGCGCCCGGCCACCGGGATCCTCTGGTTGCACGGGGGAGGCTACGCCTTGGAAACCGCCGAAAATGCCTTGGTTTATGCTGAACAGTTGGTGGTCGGCGGCGATTCGGCGGGTGGGGGCTTAAC # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [8,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.60,-1.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //