Array 1 157252-154704 **** Predicted by CRISPRDetect 2.4 *** >NZ_QECL01000027.1 Vibrio cholerae strain OYP2E03 Vc_OYP2E03_Contig_27, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 157251 28 100.0 32 ............................ TTTTTCAAAATACCAAAACAGTCCTGAATCTA 157191 28 100.0 32 ............................ TTTTGGCATGGCGAAGAGTCAGAAGTTTTCGC 157131 28 100.0 32 ............................ TCTCCAGACACGCCATCTTCTTGAATTAATCC 157071 28 100.0 32 ............................ TCACTTAATGAATTTTTTCTTTGCCAGAATTG 157011 28 100.0 32 ............................ ATCCTTTTGCTATCCGTTTGCCATCCATTTGC 156951 28 100.0 32 ............................ TCTTACTGACGAGCAAATAAAGCAGCTTGGTT 156891 28 100.0 32 ............................ AGTCGAGATTTACGCAGGGGTAGCCCGTCTAA 156831 28 100.0 32 ............................ ATTAAATTAAGAGTGCAACATTTTTTAGCATT 156771 28 100.0 32 ............................ AATATAAGCTTCTGGTGCATCATGCAAAAGGC 156711 28 100.0 32 ............................ GGAACTGGAAAAACCCACTTAGCCGTGGGTAT 156651 28 100.0 32 ............................ TCTCTGGCGCATTTGCATGAGCTGTTGCAGTA 156591 28 100.0 32 ............................ TCAAGCAGAAACAAGATCCGACGCATCTCTGG 156531 28 100.0 32 ............................ TTTCTTGGTGTCTAACTCCACTACTGACGGCG 156471 28 100.0 32 ............................ TAACACGCTTCCGGTTTGCACTCGTGCCGGTG 156411 28 100.0 32 ............................ AGATTCACGCGCTACAGACTGAGCGCTCGCCT 156351 28 100.0 32 ............................ AATCACATCGCCAGCCGGAATCATAGGAAGCC 156291 28 100.0 32 ............................ GATAGTACGTTTTGCAAGGTACGCCGCGCTTC 156231 28 100.0 32 ............................ ATCTGGCAGTAATCGCCCATTGCCACGGCCTG 156171 28 100.0 32 ............................ AGTAACCACTAAATACCAAGCCGGATTAAGAA 156111 28 100.0 32 ............................ GCTTTGCGGCTGTTCTTGTATTCGAGCTGACA 156051 28 100.0 32 ............................ TTTGTTCATGCCCAATGCGCCATCAACGGCTT 155991 28 100.0 32 ............................ GTTATCGGCGATTAACGGCGTTGGCGGCTCTG 155931 28 100.0 32 ............................ TAGATGTAGTTATCAGGGTTTAGACCAAATGC 155871 28 100.0 32 ............................ TCTAGCTTTAATAGCAAAGAGTAGCATTGAAC 155811 28 100.0 32 ............................ ATTAGTGGTTAGCTTTTTTTTCGCCCAACGAT 155751 28 100.0 32 ............................ TTCAGCGATAGCGACGGGACTTTTCTCACAAG 155691 28 100.0 32 ............................ TCGAATTGATAACCCATCTTTTCTAAATCTAT 155631 28 100.0 32 ............................ GTTGATATGGATGGATAGGATCGTAAATCCTA 155571 28 100.0 32 ............................ TTTATGTTAAAGCACCCAAATCCATCGCTTTT 155511 28 100.0 32 ............................ AGTTCTAATAACAAAACCGCGCAGTTCGATAG 155451 28 100.0 32 ............................ AAAAATCTGACCTTCCCACAATATTCGGCATT 155391 28 100.0 32 ............................ TAGCATTTGCAAAATGCCTCTGTAGCCTTGCA 155331 28 100.0 32 ............................ TAATGCTCATTTCAATAGTCTTAAAATGCACT 155271 28 100.0 32 ............................ AAAAAATCAGGGAGTGGGGCGCAAGCTTCGCG 155211 28 100.0 32 ............................ TTAATAGCCGTGATCGCCATGCGCCAGATTGG 155151 28 100.0 32 ............................ TTTACGGCATAGTCATATAAAACAAAATCACT 155091 28 100.0 32 ............................ ATTGCCGACTTTGACGCTGCGCTTTTGCTGCG 155031 28 100.0 32 ............................ TCCCACTCAAAATCTTGTTCAGAATTCCATTT 154971 28 100.0 32 ............................ TTATCTATGATTAAAGACGCTCACGACCGCCT 154911 28 100.0 32 ............................ TGTAAAGCAAGCATGTTTAACGTGCCATTCTC 154851 28 100.0 32 ............................ TTCATCGGTAATCAAGGACACTTTGGGATCAA 154791 28 96.4 32 ...........T................ ATGCCTTTGGATCGTCGTGAAACTTGCGGTGT 154731 28 92.9 0 .........................TT. | ========== ====== ====== ====== ============================ ================================ ================== 43 28 99.8 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : GAGCGCATTGCATGATTTGCAGGGGTTAAATTGGTTAGGACCTTTGGCAGGATATTGCAAGATTACTACGGTTACTCATGTGCCAGACCAAGTGGAATATCGCATCATTTCAGTTAAACGCAGTAATTTAAGCAAAGCAAAATTAGCGCGTTTAATTGCTAGAGGTAGCATAGATAAAGATGGTGAGAAACGTTACAAAGTAAAAATGCTTCGCCAAGGGTTTGATAATCCATACCTTGATCTGTCTAGCAGTTCAACAGGGCAGGTGTACCGAAAATTCTTTGAGTTTAGTGATATTCAAGCTGAGCCAGTTGATGGTGAGTTTGATAGTTATGGTCTAAGCAAAACCGCGACAGTACCTTGGTTTTAACCCTTTATTTTTGCTCTTTAAAAATGTGCTTTTAAAACAAATGGTTGCAACGGGTTGTTTTTAACAAGGTAAAAAGATGATTTTTACCCTAACAGCTTGTTGCAGCTTATTTTTATCGGTTTATTCTATT # Right flank : GAAAGTAAATCAAACGAGGCAGTTCACTTTCTAGATTACGTTAAGGTTCTTACGTTCTGCTATGCATGTTTATTAGGGTTTTCTTAAATGGTCTTTTCCCCAAGCATTAGTGACAAATTTCCGAGGTGTAATGATTAAGATAGCCCAGTTGATGAGTATCAGTTGAGGGGTAGTCACCATGAGCATCGTTGGTTGTGTTAATATCAAATCCAAGTATATCGATCGAACATGTCAGATGGTCTCGTAAGCCAAGTTTTACTCAGGGCGAGTTTTGCGTCAATAAAAATCCTTTTAAAATCATAACGTAATGAGCTATTGGATTACATCAGCTTCCATGTCTTAAGTGGAGGTTATATTCTAGATTATTTTCAATTGCCGAGTACCAGTCACAGATAGGCTACCTTTGGCGGCCTCTTCTATATGCCCGCTCCACCAGCACATCATTGGTTTTCTACGTTCGAGATAATCCGTGCGGTTATAGGCACTTCGAACTTGGTTAT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //