Array 1 1455510-1455003 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEHGD010000001.1 Methane-oxidizing endosymbiont of Gigantopelta aegis strain Gae_MOB scaffold1_size2144724, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1455509 28 100.0 32 ............................ ATGCTATTCGTTATAGCCTCGCTCAACATGCT 1455449 28 100.0 32 ............................ ATTAAGTTCTGATAAACCTTTTAAAAGCAGTA 1455389 28 100.0 32 ............................ AGTTATCAACTGCACTATTAAGCGGGTAATTA 1455329 28 100.0 32 ............................ TTAATGAACCGGATAAAATTGGTCAGCCACCT 1455269 28 100.0 32 ............................ ATCAGTACACCATGCCAGTGCTATTATTCCGA 1455209 28 100.0 32 ............................ TTTGCAGATCTTTTTGCCGATTTCATACAGAA 1455149 28 100.0 31 ............................ ACTTGCGAGAATTAAGCCAAATCCCGCTTCA 1455090 28 100.0 32 ............................ CACACCCAGCCACATGACAGCGGCCTGGCGAT 1455030 28 96.4 0 .........................C.. | ========== ====== ====== ====== ============================ ================================ ================== 9 28 99.6 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : TCGAAAAAAAAAACGAGTCATCGAGCAAGCAAAAAGAGACAATCCAGAGCGATGGAATGGACGACAAACACGAAATTTAACGCCCATTGGCCATGTTTATCTTAATCCGGATAAGGAAAATTTCAACACAACAGAATGTCAAGCAGCTTAATAAAATTCATTTCGTAAATTATTGCAAAAAATGCGACAGGTTGGTTGACATTTAGCGCTACTACCGATCAAAGGTGGTTAGCCAGTACCTGGAGACTTCGAGAATAGAATTGGTTTTCTTGCCGCCTTATGCACCAAATCTCAACCTGATTGAACGATACTGGCGATATTTCAAGAAGGAAGTTTTATACAAACAGTATTATGAAACATTCAAACAATTCAAAACAGCCTGCGAGAATTTCTTTTTGAACCAGAAAAGCATGTTGATGATTTGCGCTCACTATTAACTGAGAATTTTCAAATTATCGGTGCATGATTTGCTAAATTTTCATGTGCGGTGAGTATATTTC # Right flank : TCGTGGGCGTTACATTCGAAGTCATTGGTTTACTACTCTCCTGATATTATGCCCTAATACTCACAAGACCCAGGCCTGGCAGTTGTTTATCAAAAATAGCAACTGCCAGTTCAAGAAGCCTGGACAAATTAGATGTCTTCCTTTTCCTGCGCCCGTTTCTCCAGTGCGATACCCACCAGTAATGCGCCATTCATGGCCAGTTCAATAGCAACCATCAAGCCAATGACCCATAAAGCCGTCCAAGGCATCCCTACGGTGACGACAATAGCAAAAATCAAACTGGTCACGCCGGTAAACATCATCAGCATCCATTTTTCATTTTCGTTCTGCTGTCTGATTGCTTCCTTGATTCGATAAATACCGACAGCCAAAAACATACCCGCCAACATGATTGTCAGGCCGATCGAAGCCAAAACTGGGTTGAAAATGGAAACCAGTCCGCCCAACGTGTACAAAATAGCTGTGACGATATAAAGGCCACGACTTTTCCAGGATTTCAG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 1462807-1458337 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEHGD010000001.1 Methane-oxidizing endosymbiont of Gigantopelta aegis strain Gae_MOB scaffold1_size2144724, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1462806 28 100.0 32 ............................ TCAAATTTACGCTGGGTATATTGCCCGGGGTC 1462746 28 100.0 32 ............................ TTCACAATTTAGATTGACGTACGATATTGATA 1462686 28 100.0 32 ............................ TTCGTAATTGATTAAATAAATATCAGCATCAG 1462626 28 100.0 32 ............................ GTTGCAGATCTGCAAGCATTTATTGGATGCAG 1462566 28 100.0 32 ............................ ATAAATCAAAAAATCGACGTTCGACTTGAGAG 1462506 28 100.0 32 ............................ TGCAGTGAGCGCGGCAATTGCTGCCACAATTA 1462446 28 100.0 32 ............................ TTTTTACGGTCGAATCGAACACGTTGTTGCAA 1462386 28 100.0 32 ............................ AGATCATTGTTTTAAAAAGTCAGGCACATTAA 1462326 28 100.0 32 ............................ AGAATTATTGAGCGTGACAGGATTTAACTGTG 1462266 28 100.0 32 ............................ GTTACAGATGGATCAAAGTGAATATAAACAAA 1462206 28 100.0 32 ............................ AAAAGGTTGGCAACAAAAAGAGACCAGTATTT 1462146 28 100.0 32 ............................ GGGAGTTTTAATCAATTGCTCAACTAACATCA 1462086 28 100.0 32 ............................ TGCAAATACTGAAGCACAAATCACAGAAGTTA 1462026 28 100.0 33 ............................ CAGGAGGAATATTGATTATTCCACGTTTTATTT 1461965 28 100.0 33 ............................ CGCAACACAATCGAAAGGGAATGTTGTTGCAAC 1461904 28 100.0 32 ............................ AGAAATTGTAATTTTTACATTGTTTGCAAGAT 1461844 28 100.0 32 ............................ ATTTGCATTAAATAATTCACCCGCCAGCCCGC 1461784 28 100.0 32 ............................ GTCTAACAATGCCGCACCCGACATAAATAAAT 1461724 28 100.0 32 ............................ AAGAGTTATTTGAACAATTAAAAAACGAAACT 1461664 28 100.0 32 ............................ CCATTAAACCAGAAGATGCATATTCAGAAATA 1461604 28 100.0 32 ............................ CGATTTTTGTAATCGAGACGACTGGTGGGGTA 1461544 28 100.0 32 ............................ GTATTGTTATTGTTGACGGTCATATTTTTCTT 1461484 28 100.0 32 ............................ ACCAAAACTGTCACGTGCTCCGTTAGTTGAAA 1461424 28 100.0 32 ............................ GTATGCAATGAAATTAATCGTCATCAACTCTG 1461364 28 100.0 32 ............................ GTATGCTTGTACTTTCATTTTTTTATTTTCCT 1461304 28 100.0 32 ............................ ATCCATATTGAATACAAAACAGTTCACAAGGT 1461244 28 100.0 32 ............................ TCGAGCAAGAAGTGTATGGAAATCAGAAACGA 1461184 28 100.0 32 ............................ TTTTTTGAATAATCTGCATCAACAGAATATCC 1461124 28 100.0 32 ............................ TCGATATGCTAAATTTTTAGAGTTTGGAACAT 1461064 28 100.0 32 ............................ ACTAATAATTTCATTAGGTACATTGGGATTCG 1461004 28 100.0 32 ............................ TTGATATATAGGCGTTTCAGACCCCAGGCGTG 1460944 28 100.0 32 ............................ AAAAACCTGGGCTGATTGTGTGATTGCAGCCT 1460884 28 100.0 32 ............................ TGCGTCAGCCGTGGGCTCCAGGGCAAGCAAGG 1460824 28 100.0 32 ............................ AACACTTATCCACTTATACGATTTTCCTCCAA 1460764 28 100.0 32 ............................ CAATCTGATACTGTTCTCATTTCCTCCTTTGA 1460704 28 100.0 32 ............................ ATTATCGTTGCAGCGTTATCTGATAATAATAA 1460644 28 100.0 32 ............................ CAAAGTCAAATAATAATTTGAATGATTTTGCT 1460584 28 100.0 32 ............................ AAAAGGGCGTCCGCCTCAACAACAATTCCCTG 1460524 28 100.0 32 ............................ ATTATCGTTGCAGCGTTATCTGATAATAATAA 1460464 28 100.0 32 ............................ ATACCCACCCTGTTCGGTCAGAGTGAAAATAA 1460404 28 100.0 32 ............................ CCCGCGGAATAAGGACTACAGACAAGCAAAGC 1460344 28 100.0 32 ............................ TTCAGTATATGATAATGAATCCGCTTCATATG 1460284 28 100.0 32 ............................ ATCAACATATCTTGCGTGATGGGGATTGTCAC 1460224 28 100.0 32 ............................ CACCATTTATCAAATGTTTCAAATTTGAATTT 1460164 28 100.0 32 ............................ TGGTATGGAAAATCAGGCAGATGCAATCATTA 1460104 28 100.0 32 ............................ TCGGGTACAATCATCGGAAAAAGAAATGTATC 1460044 28 100.0 32 ............................ AATCCTGTGCGATCAACAATCGTATATCCACG 1459984 28 100.0 32 ............................ GATCGACATATCACTTAGTACTCCCTGCTTCA 1459924 28 100.0 32 ............................ CCGGCGATATGTCACTTGGCGCGACAATCAAT 1459864 28 100.0 32 ............................ ATCAAATTTACGCTGGGTATATTGCCCGGGAT 1459804 28 100.0 32 ............................ CGTCATATATTTAAATTTTGGAATTAATGATT 1459744 28 100.0 32 ............................ CTGTGCGTGCTTTTCCCCATGTGAGAATTTGC 1459684 28 100.0 32 ............................ AGCGATTTGTGCAATTGTAGGTGGTGTGTATA 1459624 28 100.0 32 ............................ AGATTCAATTGTAACAATTGAATCTGAAAAAA 1459564 28 100.0 32 ............................ ATCAGCACCAGGCATTATTGAAATTTCGTTAG 1459504 28 100.0 32 ............................ CCACGTAAGAATTTGCCAGCGGATTTTCACAT 1459444 28 100.0 32 ............................ GTTGACTGTTTTGATCATCGCCCAGCGTGGCT 1459384 28 100.0 32 ............................ CTTACGGAATACATGCAAATATCACACCAGAT 1459324 28 100.0 32 ............................ TATTACTTAAATTTTGCATGATAACTCCCTAA 1459264 28 100.0 32 ............................ TACTACAAATCCATTTCCCTCATTTTGTGCAA 1459204 28 100.0 32 ............................ CTTATTTCGCGGGGGCTACAAGCAATACAATC 1459144 28 100.0 32 ............................ GAAAAAAGCAAAAAAACACTATGATGAATTAG 1459084 28 100.0 32 ............................ CCGTCAGCCGCGGGCAAGCAAGGTAAGCAAGG 1459024 28 100.0 32 ............................ CATGAGTATATTCGTTAGGATATTTTTTTGAT 1458964 28 100.0 32 ............................ ATTACTGAACGTAATTCTGAACGTCCCATGAT 1458904 28 100.0 32 ............................ CAGTTGTCCCCTATCTCTTTTAATACTTCATT 1458844 28 100.0 32 ............................ GTTAATGTATGGGCAGAAAAATCACCGGCTTT 1458784 28 100.0 32 ............................ TGCAATTTCAAACACTCAAAAATCAGATGAAC 1458724 28 100.0 32 ............................ GAAAATCAAATATATTCAGGGAGGATTAGTTG 1458664 28 100.0 32 ............................ ATCAGGTCTTCTAGCTGCTGTTGCTTTTAAAA 1458604 28 100.0 32 ............................ ATTGATCCTGGATGTCCGATCAATAATTTAAT 1458544 28 100.0 32 ............................ AGATCTCTTTTGCTTTTGCATCATCCTTTAGT 1458484 28 100.0 32 ............................ TAAGACAAAAAAAGGCTGGGTTATCCTGAAAC 1458424 28 100.0 32 ............................ AAAACCCTGGACGATTTAAGTATTCTGGTGGA 1458364 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 75 28 100.0 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : GAAAATACCACTTTTCGCGTAATTTCCCGTATTCAAACCACCATGTCGCCCGCTAAGTATCGTCGTTTATTAGCTCGTGGAACAATTACTGAAAAAGAGCAAAAACAATACAAAGCCAAAATGTTTCAGAAAGGACTAGATAACCCCTATATGGAATTGGAAAGCGCATCAACGGGTAAAAAGTATCGACGTTATCTTATCTTTTCTGATTTGCTTGATAATTCTGTAGAAGGGAAGTTTGATCAATTTGGTTTAAGCAAAACCGCGACCGTTCCATGGTTTTTATGACCCATGTTGTAGTGGTCAAGCAAAACTGAATGTTTCATATGCTCAAGTACTTTTTGAAAACACAAAAATGATTGATAGCATGACCAAAGTTTTCATGGCTCTTTAACAAAATAGAAAAAACAATAAGTTACAACAAGGCTAAAAAAATGGGTAAAAGTCAAAAAATAACCCTAAGTTTTTGTTGTAACTACTTTTTTGTGGTTTATACTACA # Right flank : AAATACTGCGCTATTTATGCGAAGGCTATACTTCTCGCAAATGATAATTTAGCATAAAAAGATGACATAGCTCCATGAAATAAATAAGATACCCACATGAGCAACTACCTCCTTCCTGATTCTGAATTATCTAAGCTGCGTGAGGCACATGCAGAGCAGCGAGAAAAGCGGGCAGCCGACCGAATCAAAGCCGTTATTTTGCTGGGTTCAGGCTGGACAGCAATAAAAGTTGCTGAAGCACTTCTCATTGATCGCAATACGATACGCACCTACTTTCGGAAATATCAGAAAGGTGGCCTTGAAAAACTCCTTGAGACGCAACATACAGGCAGTACCGGATTCCTCTCTGTTTCAGAAGCAAAAGAACTGGATGTGTATCTTCAGGAAAACCTTCACTTAACCGCTAAATCTGTTGCTGCCTATATTAAGCGTCGCTGGGATATCAGCTATAGCACACGCGGTGTAACCGCTTTGCTGCATCATTTGGGTTACGTCTATAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.24 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //