Array 1 411-47 **** Predicted by CRISPRDetect 2.4 *** >NZ_LVWE01000017.1 Polaribacter atrinae strain KACC 17473 LPB303_106, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 410 36 100.0 29 .................................... CTGAAAGTGGTATTAGTCATGAAAGCCTT 345 36 100.0 30 .................................... TATGAGTGCTAACGTAGTTGGGTATGGTTT 279 36 100.0 30 .................................... ACTATCAAGTACCATATAGAAGTAGACAAC 213 36 100.0 30 .................................... CATTAAACTCTAAAGAATATACTATTCTGT 147 36 100.0 29 .................................... TCCAATTTTACCGCTTAACAATGCATCTG 82 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 6 36 100.0 30 GTTGTGGTTTGATTAAAGATTAGAAAAAACGATATT # Left flank : TTAGAAAAAACGATATTCCATTCTTTAAATACTGATAGTCTTTTA # Right flank : TTAGCTGTTTTAGGTATCTATGAAAATGTAGTTGTGGTTTGATTAAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGGTTTGATTAAAGATTAGAAAAAACGATATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: R [matched GTTGTGGTTTGATTAAAGATTAGAAAAAACGATATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [55.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 70-500 **** Predicted by CRISPRDetect 2.4 *** >NZ_LVWE01000019.1 Polaribacter atrinae strain KACC 17473 LPB303_108, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 70 36 100.0 30 .................................... CCACCAACAATTACAGATACACAGGTGCAT 136 36 100.0 30 .................................... CACATTCAAACAGAAATACAATCATGAGTA 202 36 100.0 30 .................................... GTATTCTGCTATTCCTGTAATTCAATATCT 268 36 100.0 30 .................................... ACTACTATTTTATTGAATATCATAATACAC 334 36 100.0 29 .................................... AATAAATCAATCCTATGAAAATTGGGAAA 399 36 100.0 30 .................................... GTAAGAGTTAAAATATCTTTCTCCTACTTT 465 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 7 36 100.0 30 GTTGTGGTTTGATTAAAGATTAGAAAAAACGATATT # Left flank : CATTCCTCTCGTCGCTTCGACGGCATCTTCTGATGTGTAGAAGAGACACTCCGTACACCGTCTCGATATG # Right flank : AGTTGTGTTGTTAACTTCTGATTATCATAAGTTTAAGTAAAAATATCGGATACAAAAAATGCTTCTTACAAAGACATAATTGCTTTGTTTGAAGCATTTTTTGCTTTCTATGACACTATCCTAAAAAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGGTTTGATTAAAGATTAGAAAAAACGATATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: F [matched GTTGTGGTTTGATTAAAGATTAGAAAAAACGATATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [48.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.27 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 74995-75555 **** Predicted by CRISPRDetect 2.4 *** >NZ_LVWE01000058.1 Polaribacter atrinae strain KACC 17473 LPB303_44, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 74995 35 86.1 30 C..-..ACA........................... CTTCAATTTCTTTTTTCTTATCTATCATGT 75060 36 100.0 30 .................................... ATCTATTTATATTATACAACTTAAACCCAT 75126 36 100.0 29 .................................... TTCTTTTGTAGTAGTAGTTTCATCAACTC 75191 36 100.0 30 .................................... TATTTAATTGCAACGCCTGGTAATATGGTA 75257 36 100.0 30 .................................... TCGTTTGCAGACTTAGCGGCTGCTACTAGT 75323 36 100.0 29 .................................... GCATTGATTAAAACGGCAATTCAGAATGC 75388 36 100.0 30 .................................... TCATATTTTATTTTCGACAAATCTACAACC 75454 36 100.0 30 .................................... TAGAAGTGTGTAAATATATTGCTGTATAAT 75520 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 9 36 98.5 30 GTTGTGGTTTGATTAAAGATTAGAAAAAACGATATT # Left flank : AAGAATAAGAGAAAATATAGGAGGGGCAGAAAAACTAAAAGAGAACACAAACCAATATGTAAACCCAAGAAGTAATCATCATGTAATTGTTTATGAGGATTCTAATGGAGGATTGAAAGATGATGTAGTTACTTTTTGGACAGCTGTAGAACGTAAAAGACAAGGACAAGATGTTTTTAAACTTCCAAATGATGGTGAGAAAATTGTTTCTACACTTCAAATTAATGATATGTTTTTATTAGGATTGAATGATGATGACATTATTACCCTAACATCAAAAGAATTAAAAAAACATCTTTTTAAAGTTCAAACATTATCATCTTCTTTTTACGAATTCAGATTAAGTACAGATTCAACTCAAAATAAAAATACAAATTCTACTGTCTTTAGAAGAATTCAAAGTTTTGGAATGGGAAAAACAGGGTGGAAAGCATTTAATCCAATTAAAGTAAAACTTAATAGTATTGGTGAAGTGAAAATAATTTAAATTTTAAAAAGTT # Right flank : G # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGGTTTGATTAAAGATTAGAAAAAACGATATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: F [matched GTTGTGGTTTGATTAAAGATTAGAAAAAACGATATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.41 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //