Array 1 45620-48295 **** Predicted by CRISPRDetect 2.4 *** >NZ_QAHX01000006.1 Lactobacillus sp. DS3_6 DS3_6_6_length_119791_cov_35.281012, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 45620 36 100.0 30 .................................... TACAACGAAGCCATTCGGAAATTAGCAGCG 45686 36 100.0 30 .................................... TTGCTCATATTGGAATCAATGTCTTTCGCG 45752 36 100.0 30 .................................... CAGTAGCAACATAAACCCTAGTACCAATAA 45818 36 100.0 30 .................................... CAACCTTACAGAAGTTCTTCAAGAGCGGTT 45884 36 100.0 30 .................................... GGACGAGCAAATCTAACCGCTTCGGGCCAA 45950 36 100.0 30 .................................... CCGAAGGATAAGCCAATATTTGTACCAGAC 46016 36 100.0 30 .................................... GACTTCGAATGCTGAAGAACTAGCTGATCA 46082 36 100.0 30 .................................... GGGGCACCTCGATATACGGGTACCCCATCT 46148 36 100.0 30 .................................... CGAATTTAAGACGATGAAACTGCCGTATGG 46214 36 100.0 30 .................................... AGAGTTTATTCAGCATGATAGTACCAAATT 46280 36 100.0 30 .................................... TCAAATAGCCTCTTCGAAAGTTAAAGGAGG 46346 36 100.0 30 .................................... AGCGTGGCGTAGCGCTAACTTGTCATTTTT 46412 36 100.0 30 .................................... AAAAATTGGGGATTGGCAAGATTACGACTG 46478 36 100.0 30 .................................... TATTTCGCACTTCCAAAATCATAGCCATCA 46544 36 100.0 30 .................................... CGCCTGAACATTGCATCGATGGTTTGATCA 46610 36 100.0 30 .................................... GTTGGTGGCAGCGATTCATTGCTGACGTCC 46676 36 100.0 29 .................................... AACAATTGAAGCGGTGGAAGCTATAGCCG 46742 36 100.0 30 .................................... ACGTCGCCGCGAATTTTCCGCATTACCGTA 46808 36 100.0 30 .................................... TCGACAATTGTGACACGGGTTTCAACGTCA 46874 36 100.0 29 .................................... AACGGTGCTGCCAACTGGGTGCTCGCGCG 46940 36 100.0 30 .................................... TTGAGTTCTGATTGTTAGTTGTATCTTGGT 47006 36 100.0 30 .................................... CTTCATCTAATGATGAATTAACTAACAAGT 47072 36 100.0 29 .................................... AACGGTGCTGCCAACTGGGTGCTCGCGCG 47138 36 100.0 30 .................................... CTAACCACTGGACTGGCTGGAGGGGTCGCC 47204 36 100.0 30 .................................... CATCGTACCCTCACAAAAGCTAACGCCGGC 47270 36 100.0 30 .................................... CTTTTATGAAGAACTGTTTACACCGGTTAT 47336 36 100.0 30 .................................... TCTTCAAGGTCTTGTGTGGCAATAGCGTTT 47402 36 100.0 30 .................................... TCAATATAACTCGCATCATAATCAAGATTA 47468 36 100.0 30 .................................... AAGGTGAGCAAATCTTTGATGTTAGTCAGC 47534 36 100.0 30 .................................... ATCTCACTGATGTTATCGGCGATTTACGAG 47600 36 100.0 30 .................................... GGGATTGTGGGCTGACGATAGATATACGCT 47666 36 100.0 30 .................................... CTAACCTTGGCTGTGAATACTGGAGGCGTC 47732 36 100.0 30 .................................... GTAAAACCATCATTCGTCTTGGAGTCAATC 47798 36 100.0 30 .................................... CATATTGACGTTGTGAACGTTGCATTTCTG 47864 36 100.0 30 .................................... CTTACGTCAACGGTTATACCGTGCGCAAGG 47930 36 100.0 30 .................................... AAGGGTTAGCGCCACTTAATCCTGACAACT 47996 36 97.2 30 ................................A... AAAGGCTTACGTTCAGGCGATTGAATCCGG 48062 36 100.0 30 .................................... ACCCAGTTTCCTCGTTGCGCAGATGTTTGT 48128 36 100.0 30 .................................... CCGAGAAGGTCGGACGATCAACTACTTTCG 48194 36 100.0 30 .................................... AGGAAATTCGAGTTCTTCCCGCAATTGATG 48260 36 83.3 0 C.............C..............G..TTC. | ========== ====== ====== ====== ==================================== ============================== ================== 41 36 99.5 30 GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC # Left flank : AGCTTGATCTAGATAAACTTTTTCAACGTCTAATCTATAAGAGGATGGAGTTGTTGATTGAGAATCAGCGGCTTGTCGAACTGATCGATCAATCGCAACAAATGGCGATGTATTTACTTCAAGATCCATTTTTGAGCGACTTGCCAGTCACGGTTGAACCAGGTGGTAAGCTTGAACAAATCATGAAATACTGCAACGTTCATTTTGATGAGGCTGTCACGACAGAGTCAATCTCGAAGATTGAGGCGCTTATTCAGACGTTAACTAAATTGGAGGAAAAGAAACTTGTCATTCTTACAAATGTCAGTCATTATTTAAGTGCCAGAGATTTCTTTGCGGTGACTGAACAGATCGGCGATACAGAACTTCAGGTCATTCTCATCGAGTTCTCAAAAGTGAACCGAAAGAAATACTTTGAGAAATGCCAGTATATCTATATTGACGAGGACTTCGTTGATAGTCGTGAACTAGATTGATTAGGAGATTGTGTGAAAACAACG # Right flank : CAAACAGCAGTGAGACTAAACTGAAGCTAAACTTGTCAAAAAGTGCCTCATTTTGTGACAAAATAAGGTGTTTCACTATTTATTGTGTGAACCAAGCCTCAATATTTACAAAGCTGAACCTTTCAACGTTCAGCTTAAAAGCCGCCGTCTAAAGCAATATCGTAGTAACCACATACACTCATGCGGTGATATATCAATCAAAAACTAAGTGCTATCTAACTCCTCTTGTGATAGAATTCATTATATATGAAATCGCTTACACAACGAGGAGGAAGAACGACATGAAAAAACTAATAGTGCTCAGCGCCACACTTTTGGTCAGCATGGGGTTGGCCGCATGTAGTAGTGGATCGAGCTCTAGTTCGAGCAAGAGCAGCAGCACGACTAGCCAGACGAGCAATGCTAAGGTGAAGATTAATACCGGCGCCGATGCGAGTGCCAAGGTGCCGGCAGCCGGCACCTTAGTGATGCGTCAGCTTTATGCTGCACCACACGGCAAG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: F [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //