Array 1 55292-59164 **** Predicted by CRISPRDetect 2.4 *** >NZ_VWTS01000014.1 Aeromonas veronii strain A136 contig00014, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 55292 28 100.0 33 ............................ TGCGTTGAACCCGCGAGCCAGTAGGTTGTTCCC 55353 28 100.0 33 ............................ TCAAAGAGAGGAATGAGCCGTGATTACAACTAG 55414 28 100.0 33 ............................ CATTGCGGATGCTCTTATCAAGGATTCTGGCAA 55475 28 100.0 33 ............................ CCATACTGATTCCACGGAAGCTGGAGAGGCTGC 55536 28 100.0 33 ............................ CGTGCTAGAAATCGTAAAGATTCTAAGCTGCGT 55597 28 100.0 33 ............................ TACTACGGCATTGAAGGGGCTGGCCACGCTGTC 55658 28 100.0 33 ............................ CAGCGGGGACATCTCCCCGTTGGGGAGACCGGG 55719 28 100.0 33 ............................ CAGGGTCAGGGAAAATATGAGGGTAGGGGTAAG 55780 28 100.0 33 ............................ CATGGCATCATCCAGACGCCACCCTGTTACTGT 55841 28 100.0 33 ............................ TCCTGGCCATAGTGGTGGAGCAACGCTCGGCCC 55902 28 100.0 33 ............................ CAGTACGAAACGCTGGAGGATGGCACGATAAGG 55963 28 100.0 33 ............................ TGTAACTCGCCCCATCCTACTGAGCATGCGAAG 56024 28 100.0 34 ............................ CAAGGAGGAAACATGGACGATTTGAGCTTGAGCG 56086 28 100.0 33 ............................ TTTACCCTTGCATTCTAACTCTTCCATCGTCTC 56147 28 100.0 33 ............................ TGAGTGGATCTCATTAAGATTCACTCACCTTGC 56208 28 100.0 33 ............................ TAATGCACCGCTACGACCGAGCCATCATGCAAG 56269 28 100.0 33 ............................ CGGCTTGAAGGAACCCCTCGGCAGTGACCTGGA 56330 28 100.0 33 ............................ TTGGTGAGCAGCCTGAGTATCAGCCGCCCGAGC 56391 28 100.0 33 ............................ TCTGGATATCACCTCCCCCATCGATCCGGATAC 56452 28 100.0 33 ............................ TCTGTTATCAGATTTCCAAGCGTCCACACGGGC 56513 28 100.0 33 ............................ CTGGCTGATCGTCTCGGTGACCCTGATGGAATC 56574 28 100.0 33 ............................ TAGCCCTCCGTGAGCTTGGTAAGCGTTCAGAAA 56635 28 100.0 33 ............................ CTCTTGCCCGATACGGGTGTCATTGTGATTCAT 56696 28 100.0 33 ............................ CTCGGTGATGAGTGTCGTGACGTCTTCGGCGTT 56757 28 100.0 33 ............................ CAGTCTGGGCTGTCAGGCAATGGCACCTATAGC 56818 28 100.0 33 ............................ TGTTGCATCTATTGGCTATGCCACTGCATACAA 56879 28 100.0 33 ............................ TAGCGTGACTGTCTGAACACGAATCGATACCCG 56940 28 100.0 33 ............................ CATGCTGTCAGCCACCTCACGGCGCATTGCATC 57001 28 100.0 33 ............................ CATCTATCCATGAGACATTGGTTCGATTGGAGA 57062 28 100.0 33 ............................ TCACGTCTCTCACCATGTTGGAAGGCAGCACGG 57123 28 100.0 33 ............................ CACACACCTTATCAATGCCCATCATTTTCTCCT 57184 28 100.0 33 ............................ TTCAGCCCTCAGGACTACTACAGCCACGTGACC 57245 28 100.0 33 ............................ CGGTGCCTATCTCGCGTAGGGATGAATTCGAGG 57306 28 100.0 33 ............................ CGCAGGGTTTGACGTCTACGTGCATGAGTGGTG 57367 28 100.0 33 ............................ TTCTCTCATTTCAGCAATTTCCAATGGTGCTGG 57428 28 100.0 33 ............................ TACATCCTTAGCATTGTGTGCAACAAGCGCTTG 57489 28 100.0 33 ............................ CCATATACGTCAGAGGCCAGCACAGACGGTAGC 57550 28 100.0 33 ............................ CCCTGTTGTGGTTTTTGATATCCCGATCATATT 57611 28 100.0 33 ............................ TCCCATGGGTGAGTTCGCCACCCTGACTCGCCT 57672 28 100.0 33 ............................ CGACGCTATCCACTGTGGATACGGCACGTTGAA 57733 28 100.0 33 ............................ CTGGCCGCCTCTCGGCGTCTCAGTGTCGCCAAG 57794 28 100.0 34 ............................ CGCACAGAGACAATTTTGGGTGCAGAAGAACCCA 57856 28 100.0 33 ............................ TCGTATATTGCGGCAATAACCCTGACGTGGTAA 57917 28 100.0 33 ............................ TGTGCCACAGAAGCAGTACGACCTGTATATCGA 57978 28 100.0 33 ............................ CTAATATCGACACGGGCGAGGAGTTCCATTTTG 58039 28 100.0 33 ............................ CTTGACCATATGGAGCTTAGCCGTAAGCATGGC 58100 28 100.0 33 ............................ CCAGGTGGCGGGCACCTTCGTTGACCCGATCAC 58161 28 100.0 33 ............................ CGACCCGTCCGCACTTATTTGTGGGCAAACATC 58222 28 100.0 33 ............................ CAGCGTGGCCAGCACCATCACCCCGCAGAGGTT 58283 28 100.0 33 ............................ CTACGGTCACACCAGCGTGCCGCCAGAGGGGTC 58344 28 100.0 33 ............................ CCCCATCGACCCCGCCACGCTCGACGACTTTTT 58405 28 100.0 33 ............................ TCGGTGCGGATGGATAACCTCTACACCGCTGGA 58466 28 100.0 33 ............................ CAACTTTGACGCACGTAACTTCGAAAGATGTCA 58527 28 100.0 33 ............................ TCAGGTGGGGGGCAGACATCCGCCCCCGTGTGA 58588 28 100.0 33 ............................ CCAGTCGTGCTCTGTTCGCCTAAAGCCTACGAG 58649 28 100.0 33 ............................ CGACCCCCCACTGAACTTCTCTCCTGTGTACGA 58710 28 100.0 33 ............................ TATAGCGGGTCCTTGAGCGTGGCATATGTAGTC 58771 28 100.0 33 ............................ CTACTATGGAGCCGTGTTGTGGTCAAACGCCAA 58832 28 100.0 33 ............................ TTGGCAGCCAGGGTCATTTGCATGCACCTTGCA 58893 28 96.4 33 ..........T................. CGAGCTGGACAGCCTCAAGGCCAGCCTGCTGCA 58954 28 96.4 33 .................A.......... TATCGCCGCCGTTATTCAGGCGACCGGCGCCGG 59015 28 96.4 33 ....G....................... TATCTCCGAGGTGGCAAAAACCAGTGCAGATGC 59076 28 96.4 33 ...........A................ CCATGCTGATAACCATCACCAGCCTACCAACCA 59137 28 71.4 0 .C...............A..A.CC.GCG | ========== ====== ====== ====== ============================ ================================== ================== 64 28 99.3 33 GTCTTCCCCACGCCCGTGGGGGTGTTTC # Left flank : GAACCTCTGCATCGATCTCGCCTTTTCCCTGACGCGTGAGATGGCGGGGCGTTATGAGAAGGCTCTGGTTTCATCCCGCTTTCGAGAGCGAGTGATAGAGCTGGATCTGCTGACTCGTTTGGCACGAGATATTCCGCAGTTATTGGGAGGGGCAAGTACTGATGCTGATAGTACTGGCTAATGATTTACCCCCTGCGGTACGAGGACGAATGAAGCTCTGGTTCATCGAGCCGAGGCCCAACGTCTTTGTATCTGGCATTAAAGACTCGGTCGCTGACACAGTGATCGAATACCTCTGCCAACACTGTTCACCGGCAGCTGGTGTGGTGATATTCAAGAGCATCGCCAAAACACCGGGCTATCAGATCCGTACCATAGGCTCACCGACCAAGACGATCTGTGAGATAAACGGCCTGCAGTTGGTGGTAGAAAAGCTACTCGACCAGTAAGCCAACCACAATCTATAGCTGGCTTGGCGCGATCTTTAACAATATATTGGT # Right flank : GTAACAAATATATCTGGGGAGGTTGTATATCTCTGTAGCAGTAATTGACTGACCTTAACTCAAGGCACAACAAACCAATTTCCCAACATCTGCGTATTCCGGTGAAGTTGAACAGTGATTCCGGAATCTGTGAACACCATTTCCGGAAAGTATGCGGACAGGGATTCTTCGAGCAGAAACTGAGCTTTGAGGGGAGGCATCTTTTCGACTCACCGAACAAGCCAGCAGCCAAGCGCAGCGCGGCAGTTGTGGATCCAAAACGTTGGAACAGGACGGTTCATCTGACATCAGAGTACGTGCACTGAAGTGTCCGGAATCGGTGTACACGCAAGCCGGAATCAGCGTTCATTTTCGACCGGAATATGCAAGGGTTACCTCTGCTAATATAATATATCGAACCATGACCGAATTTGATCGGGAAGAGGCTGGCAAATGGTTAGCCGCTCAACCCTGGGTGCTCTCATATCAGGTAGCCCCGCTAAGCGATGCCTGGTATGGCC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGCCCGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCACGCCCGTGGGGGTGTTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //