Array 1 67185-70339 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP008804.1 Moraxella catarrhalis strain 25240 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 67185 28 100.0 32 ............................ AAATTCTGCCCCGTTCTCGCTGTTTCGGTTGT 67245 28 100.0 32 ............................ GACCAGCAAAAGCGTGGCAACTTTTAGAGCAG 67305 28 100.0 32 ............................ AAGGTGAGATAATGATAAGAGTTGATAAGTGC 67365 28 100.0 32 ............................ TTTGACAATCATCGTATGTGGCTCAGGGGCAA 67425 28 100.0 33 ............................ CACCAAAACCTTGACACGGTCAGGATTTAGCAC 67486 28 100.0 33 ............................ ATTTTGATTTTTGAAGCATTGAGCGAATCTGAG 67547 28 100.0 32 ............................ AAACAAGTCGGTGAGATTATTAAGCCATTATT 67607 28 100.0 32 ............................ ATAGTTTCCGCCACAAAGCAACCGCCATACCT 67667 28 100.0 32 ............................ ATCATAGTTAATGACTTCTTGCACACCGTTAC 67727 28 100.0 32 ............................ AATTGGCGTACGCAGTGATTGGTCAAGATGGC 67787 28 100.0 32 ............................ GCACACACCTGACAGCCAACACTCAATCAATC 67847 28 100.0 32 ............................ TAAAAGCTCATAGTTAAGCTGAGTTGCGTGAA 67907 28 100.0 32 ............................ TGTTGAAAAAATCTTTAGTACGCAGGATAGAT 67967 28 100.0 32 ............................ AACTTACTGAGCTTTCGACTGTTCTGATGCGT 68027 28 100.0 33 ............................ ATGGCAGTATTATGAAACGGGCAAACTTATCAT 68088 28 100.0 32 ............................ GCACGAAATACACGCATTACCATGTTCGCTTG 68148 28 96.4 32 ...........T................ AACTAGGAGAAATCTCATGGCAAAAGTTGTAG 68208 28 100.0 32 ............................ TTGATGTACTAAAGTCGTGTTAATAACATAAT 68268 28 100.0 32 ............................ TTACCTGATGATACCATTTCCAATTTAACTTC 68328 28 100.0 32 ............................ AAAATGCTTATTAAAAAGCGCACACAAATCCT 68388 28 100.0 32 ............................ ATTGACCTTGTTGCCAAACTCATTGAAAAACA 68448 28 100.0 32 ............................ TTTTCCGTCGCTCTTAGAATTTGGATTTCAGT 68508 28 100.0 32 ............................ AATTATATTACAGTTGTGAACAGTCGAGAAAT 68568 28 100.0 32 ............................ AGAGCTGACCGCCCATTGGGTTTTTAGCACAT 68628 28 100.0 32 ............................ TAAAGGTGTTGGCAATGTTACTTATCATAAAT 68688 28 100.0 32 ............................ ATAGACGCTTTTTCAACTCGCAAACAAGAAAT 68748 28 100.0 32 ............................ TTGCTTTGTTGTTAACGCTCGGTTTGTCGTTG 68808 28 100.0 32 ............................ AGTCGAAAGCTCAGTAAGCGGTAATACTTCAA 68868 28 100.0 32 ............................ CAGCTGGCAGGCAAAGCAAGCACAGCGTCAGT 68928 28 100.0 33 ............................ TGTTGATGCTCCTATGTCGTATAGCACCCCGTC 68989 28 100.0 33 ............................ ATTTTTCTCAGAAGGCGGCCGCCTAGTTTTAAA 69050 28 100.0 32 ............................ AAACAAGTCGATAAGATTATTGAACCACTATT 69110 28 100.0 32 ............................ AATCAAATATCTGCTGATGAGATAAAACAAAC 69170 28 96.4 32 ...........T................ CACCCAAAGACATTTCAATTCAGTTACTTAGA 69230 28 100.0 33 ............................ ACTTACTGAGCTTTCAACAGTATTAATCCGTCT 69291 28 100.0 33 ............................ CTATTTACCCACCTTTCGTGAGAAGCCTATCGG 69352 28 100.0 32 ............................ CAAGATTTATGCAAGAGATGATGGCGAGATGG 69412 28 100.0 32 ............................ ATCGGTCGGTCATGGCGGTAAGCTAATTTTGG 69472 28 100.0 33 ............................ CATGTTCTCAGTGATAACACGCCCAACCACAAT 69533 28 100.0 32 ............................ AATATCAATATCATGTACAGTTTTCATTAAAT 69593 28 100.0 32 ............................ TAGGCAATGAGCCTGAAGTCAAAACATTCACC 69653 28 100.0 32 ............................ ATAATGAACAAATGAATATTATTCCGTTTGTT 69713 28 100.0 32 ............................ CCTAATTCAATCGATTCAAAACCAAAAATATT 69773 28 100.0 32 ............................ ACTGTAGATTATCAGGAAGACTGGGTAATGTT 69833 28 100.0 32 ............................ AATCATACTTGAGCAATACGAAAACAAGAAAA 69893 28 100.0 32 ............................ TAATAGAACCATCGGTGAGCGGATTAATCAAC 69953 28 100.0 32 ............................ ACTTGATTTAGTAGCTAAGCTTGATGTGTCAA 70013 28 100.0 32 ............................ GCCTTGGTGTTGTCAGTTTTTGAGCAGAACGA 70073 28 100.0 31 ............................ AAAAACCGTTGTGGATAAAATCGCTCCTTTA 70132 28 100.0 32 ............................ GAAAACATGGGCTTTTTATCGCCGTGCGGACT 70192 28 100.0 32 ............................ ATAATTAACAGTTGCACAACCAATCTTAAAGA 70252 28 100.0 32 ............................ ATTGACTGAATTTACCGCAGTTTCAATCGTTG 70312 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 53 28 99.9 32 CTTCACGACCGCACAGGTCGCTTAGAAA # Left flank : TGCCTGTGCCAAGTAAAATGACCGTCGTGTTGGCGATCGGAATATTATAATAGTGGTTTTGGTATTTCGTTTCGGTCAGGTATAAGATACGCCCATCTTTTTGCATGACTCGGCAATGCTCAAGATAAAATAAATTCGCCCGTTTGGAGTGTAAAATTGCTTTCAAATCGGTCGGTTTGAGCGTATTCATAATAATACAAATCCATGTTTAATGATTCAATTTTATCCTAACAATTTTCAACATCATTTAATATGATTTTATTGGATTATAAACTAAAAATAAATTTATACCAATCATTTTTTAATTGTATTTAGCGATTAAAATGTTTTAAGATAACCCAACCAGAAGATGGAAAAATAACTGATTGACCCTTTATTTTTTTACTATTTAAAAACTTGAATATTTTCAATAAGTTATAACATGAAGATTTTTGATTGGGTTTTTGACAAATTTTATCATAATGACTTGTTATTTCTTATTATTTTGGTTTATACTAACT # Right flank : ATTTTGTTCTATGGCTACGCTGATTATTTAAAATTTTTGTGCCAATCCCTTGAAAATTTTATCCTTAACCATTATGAAGATGGGGAATTTATATTAACTTTTTTGGGGCAATTTATGACCGAGCAAACCACCGAACAAACCACTATGGAAGAGATTATGGCTGAGACGACAACCGAGCAAGTCGAAGCACTTCATAGCCAAATCCAAGCGCTAGAAAATGAAGTCAAAGAAGCCAAAGAGACTGCCGCGCGTGCCAATGCCGAAAGCTATAATGCCCAACGCCGTATGGAACAAGAAACCGATAAAGCCAAAAAATTTGCACTACAAAAGTTTGCCAAAGAGCTTTTGGAGGTGGTTGACAACCTAGAGCGTGCCATTAAAGATGCTGAAGAGACAGGTGCAGATGACGCATCACTTAAAGGCATTCGCCTAACACATAAAGTACTGCTTAGCATCCTTGAGAAAAATGGCGTCGTGGCCGTGGGTAATGTCGGTGATAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACGACCGCACAGGTCGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTTCACGACCGCACAGGTCGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.40,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0.41 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //