Array 1 15541-15766 **** Predicted by CRISPRDetect 2.4 *** >NZ_NTWL01000003.1 Bacillus cereus strain AFS009778 AFS009778_71_A3_Contig3_140411, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 15541 29 100.0 37 ............................. GCTGTATTATCTTTAACTTCTTTCTTCTCTAAATCTG 15607 29 100.0 36 ............................. ACATACGGTGATAAAACTACATCGTATCAGGTATAG 15672 29 100.0 37 ............................. GAATACTCTCACTAGGAGGTGTTGTGACGTTATGACG 15738 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ===================================== ================== 4 29 100.0 37 TTTAAATACATCTTATGTTTCTGTTCAAC # Left flank : ATATAGGGAAATACCTATCAACGTTTTGAAAAAAAAGACAAAAAAAGCGACGAAAAACGAAAAGAACCACCCAACGCCGCAAACGTACTTGGTGGTTCAATAAAAAATAACTAAATTTTTAGTAACCAACCACCTTGCGGTAGCTGTTACATAAGGCGAAGTGTTACCAGCACTTCGTCTTCTTTAGTTTATGCAAAAACTATTGTTATAATACTTCTACACATATTATAACATCAACTATAGTACATGTCATGCAGATTTGTTCACTATAGTTGGTAAAAGAGACCAAATTATTATCAAAACGAAATCAATTTTGTTCCTGTCTCAAAATACTTTGCAGGAGCATAGATTTTCCTACTCTTAATTCCCCTTTCTATGAAAAAACTTCTCTCTTTAAAAATTTTCCTTTAGCTTATCTATTGAGTTACTCGAAATCAATTCTAATTTAAGAATTTTGTTCAACAAGTTACGTACTTACGGTAAAATCAATAGACCAAAAT # Right flank : CACCGATTAAATCAACTTTTTATTACCTTCATATTTTATATAATACTATACTGCATATGAGTTTAGTGATTTTTTTACCAGCAGTTCATAAAAAAAATAAAATTCTCAAAAAGAAATAGTATAAGTCTTGAATTAACAAAGTTTATTAGATTCCCACTATCATTTCACTTGGTAAATTCACAAAAATAGGAGATCGCTATTATTTCTATACCCTATTTCAATCTCATCAAAGCTATATTCATTTAGCATTTTGATAATAGTAACTAAGTCTTCCCCCTCATTTATAATATTCCTAATTTCCTTTTCCATTTTTAATAAATTTGAGGGAGTAATCCCCCCCCCTAAAAGTAGATTTTTGATAATGATTTAAATATTTTTTACAGATTTTAAAAACTTTCGTCACTCGTTTCTCATTTACATCATAAAAAACAAACGCATAATTAGCATTCATTTGATTTTTCATTATTTTTTCTCCTTTAGATTAAATGGAATAAAAGAAT # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTAAATACATCTTATGTTTCTGTTCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [73.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 2 25635-24944 **** Predicted by CRISPRDetect 2.4 *** >NZ_NTWL01000003.1 Bacillus cereus strain AFS009778 AFS009778_71_A3_Contig3_140411, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 25634 30 100.0 36 .............................. ATTGCCTTAACTGTAAAGCTATATTCTTCAGCTTCT 25568 30 100.0 35 .............................. GGTAAATCGGGCAAATTGTCCATTGGGTCTTTTAT 25503 30 96.7 35 .....................C........ CTTGCTACACTTTCCAATAACCATGTCGGAATCCA 25438 30 96.7 37 .........A.................... TTTCAATTAGTCGTTTGTGATAAATGATTGCAAGTGC 25371 30 100.0 36 .............................. ATAAGTACAACGTCAAACTCTGTATATTCCCTTCTA 25305 30 100.0 37 .............................. CAAATGGTGGCTACCCGTGAAGGGTTTGAAATATGGT 25238 30 96.7 37 .........A.................... TGCTCTAAGACTACTGCATTCCCATACCCTCCAAATC 25171 30 93.3 36 ...A.....A.................... ATTTTATCTTCTAATGGTTTTCGTGGTCTTGGCATT 25105 30 93.3 36 .........A......A............. AAAGAAAAGGCAATGTGTGGTGCAACGAGTGTAAAA 25039 30 90.0 36 ......T..A......A............. TACAAATCTTATCATAACGTATGATTTAAAGAATTT 24973 30 76.7 0 A.....T.GA......A......A.....A | ========== ====== ====== ====== ============================== ===================================== ================== 11 30 94.9 36 GTTGAACAATAACATATGATGTATTTAAAC # Left flank : AAAAGTATATAATCCTTCTTAAACTAGTAGCTGAATGGATAATCCAAAGGTACATCCCTTAATGGGGATGTGCCTTTTTTCGTAGAAAGGGGAATTATTAATGGATAAAAAGAAAAAACAACGTGTTAGACGTGTAATTATTATAGGGATTGTCGCAATGATTTTATTGATATACAGTGGGAACGAATTTCAGGAGAAGAATGGAAGAATCTATGCTCCTGCAAAGTATTTCGAGACGGGAACAAAATTAGTTTCATTTTAATCTTTTTCATATTTTCATCGAACAATATGGGGTAATACGGAAGTTGCCGAACGTTTTACCAGATTATTTACCAACCTAATTAATTGGTGATAACATGTAAATGTAGATAAAGTAAGGAAATTCTGCATAAATTATAAGTGAATGAGATTTATATCAATTAGCTGGTAAAAAACTTATAAACCCACGTTTCTATAGTATAATAGTGGATACAGGAAATAAAGAGCCAGTATTATTCGGT # Right flank : GCTAAAAAATGTTATTGGTTTAGGAAGTAATATGGTTAAATAATAAAGTAGAAAGTATTATAATTTCGAAATAAAAAGCACACTCTTGATTTGAACTGCCCCCTATAAAATAGGCAGTTTAATAAGAGTTGTGCTTTTTTATTTAAAACGGAAATATAAGGTGGGGAGGATAGAGTGCTGAATGAGCTCAGTATAATTTAATTGTTTACATTTTTGTAAAATAAATAAATCGTATTATTTATTATAATATGATATCCTATTTTTAGGAGGTGTGAAAATTTGAATTTTGAGTTAATAGTTACAACTTTATTGAAAGAAGATCTTCACTATGAGGATAGTTTGCAATTAATTGGTAGTTTCATAAACAAAGTGATGCTTCAAAGTGAAAAATTAAAAGCCTTGCATGAAAGAAAAGGTTATAAAAATTATGTTTTTAGCAATTTTTATCCATTTGAAAAAGATAAAATATACAAAAGTGGCCGAGTGTATGTATTTCGATT # Questionable array : NO Score: 5.62 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.61, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAATAACATATGATGTATTTAAAC # Alternate repeat : GTTGAACAAAAACATATGATGTATTTAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [14-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //