Array 1 44897-47685 **** Predicted by CRISPRDetect 2.4 *** >NZ_LVCY01000008.1 Shewanella algae strain ACCC scaffold00008, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 44897 28 100.0 32 ............................ ATGTGACCTTAACTGAGCCAAAGTGGATTAAC 44957 28 100.0 32 ............................ AATCGGCTCAGGGACAACTCCGAGATGGTGCT 45017 28 100.0 32 ............................ AATTGATTGCACAGACTCAGTGCAACGTGCTT 45077 28 100.0 32 ............................ TTGCTGAGTTTCCTGCTGCAAGCCGTGAGACA 45137 28 100.0 32 ............................ ACTTGCCCAAACACGGCGCGAGGGCTTGAGCA 45197 28 100.0 32 ............................ AATGCCAGCCTTGGCGCAATCCATGAATTTGG 45257 28 100.0 32 ............................ TGATTGGTCGAATACGTCGCGGGATCGGTGCG 45317 28 100.0 32 ............................ TTGGTGGTATCGATAGGGATGCGCAGCTGTTG 45377 28 100.0 32 ............................ ATCATGGAATATTTCATGAAGAACAACCTGTT 45437 28 100.0 32 ............................ GGATTAATTCTGGCCCTTATCTACACGATAAT 45497 28 100.0 32 ............................ AAAGAAGCTAAGCCAATGGTGCAGTCTGTAGC 45557 28 100.0 32 ............................ ATTGTGGACATTCTCAACGCGCTGGCCGGGGC 45617 28 100.0 32 ............................ TTGTTCGCTGTCTCGGCGGTCAGGTTGGTAAG 45677 28 100.0 32 ............................ TGATACACTATCCGTAACGGGCCATGTAACAC 45737 28 96.4 32 ............T............... TAAGCAATTATAGTGCGCTGGCGGCTTAGGCT 45797 28 100.0 32 ............................ TTCACAGCCATCTCAACCAGACGTGAGTCAAT 45857 28 100.0 32 ............................ TGTTGAAGCATAGCAATGTCTGACTTGCTTGC 45917 28 100.0 33 ............................ CTGCTGCGTCTTTGATGATGAGCTCAGCGGTTA 45978 28 100.0 32 ............................ TTAATGAGATAGTCACCATCAGTGCTGGCGTA 46038 28 100.0 32 ............................ CATTTCTCTTCTCCCACTCCTTCGCAGCCATC 46098 28 100.0 32 ............................ ATCAATAGACACATTACTGCGATTGGCATTAA 46158 28 100.0 32 ............................ TTTATGAGGAAAGTTGTAAGTAACTCCAGGAG 46218 28 100.0 32 ............................ TTGGTCATCCATGAATGCCGTCATGTGTTTCG 46278 28 100.0 32 ............................ TCGGTGTGACATACGAAGTACTTGCCTATGTT 46338 28 100.0 32 ............................ TATCGATACCACCAAGGCACGCGCCGCGTTCC 46398 28 100.0 32 ............................ ACCAGGTTAGCACAGTGATAATTGTCAATATT 46458 28 100.0 32 ............................ TTGGGTTAGTGTTCGACAAGTGGGGGATGCCT 46518 28 100.0 32 ............................ CTTTATGAATATGACGTTGACAATACTTACTA 46578 28 100.0 32 ............................ TCTCATTTGAAATCCCTCGTCGCTGTGATAAT 46638 28 100.0 32 ............................ ATCAGTGCTGGCGTAGTAGCGACATACTCTTT 46698 28 100.0 32 ............................ AGAAATTACGACAAGGTGGAATATTTTAAATG 46758 28 100.0 32 ............................ TTTGGCTTCAATCATTGGGCCAGAGAAAGCTT 46818 28 100.0 32 ............................ TGTCACAGCGCAGTGCATCGCCCACTTGTGTG 46878 28 100.0 32 ............................ GGCATGGAAGGTATTCCGGTCATTACCGAGGT 46938 28 100.0 32 ............................ ACTGGCATTATCGGAAGGTAGGATCTACCAAA 46998 28 100.0 32 ............................ TATCGACACCACCAAGGCGCGCGCCGCGTTTC 47058 28 100.0 32 ............................ GTGAAACCTTGGTCAATTGGTGTAACGTAAGT 47118 28 100.0 32 ............................ ACTCAGCGATGCCGGTCGCTTCGGGGATCATC 47178 28 100.0 32 ............................ TACTGAACAGATAATTTTCATCACTAGCCGCT 47238 28 100.0 32 ............................ TCCAGCCGCCATAAACCACTCTGGAGAATTTG 47298 28 100.0 32 ............................ ATGCTGGCGATGTTGGCTGATAACACTCGTCC 47358 28 100.0 32 ............................ TCATCCGGTAACACATGCTCAGATAACCAAAA 47418 28 100.0 32 ............................ GCGCAAACAGGCGTCAAGAACCCGGCGCTTAA 47478 28 100.0 32 ............................ TTTCTCAGGCCGAACTGGCGGCGCTACTTGGC 47538 28 100.0 32 ............................ CTACTTTGGTGAAACGATAGCGATCCATAGCT 47598 28 96.4 32 ..........A................. TGGCGCAGATAACGTGGGTCCACCCATTTGTA 47658 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 47 28 99.8 32 GTTCACTGCCGCCCAGGCAGCTTAGAAA # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAGGCTGTTCACTGCCGCCCAGGCAGCTTAGAAAAGCAGATGGCTGCTAGTGATACATTATTACTG # Right flank : AGTTCTTCTGGTGATGACCTTTCCCCCGAATTTATCACTCGGCCCCAGCAAAATCCGAACGTCTTGCATTTGTGGGGCTGAAGAGGCCGAAACTGAGGTGATCTAAATAGCGGCCCGGCTCAAGGCAGCATGTCTACTCGAAGTAGTCTGCTGGCGCTGCGGCCTTTGTCGTCGCTGACCGATAACTGGAAGCGTCCTGCTCTGGGCGGGCGCCATTCCAGGGTTTGGCCCGGCAGGCTCTGCCCGAGCAGGCTGTTACCGGCAAACCAGTAGAGTATTTGGCTGTCGGAGGCGGCGTCGGCCTTGAGGGCGATGTGCTCATTGGCCACGCTTTGGCGCAGGCTGTAGGTGACGCCTTTCAAGGGAGAGCGGATAAGCGGGGCCGAGTAGCTGACCGCGACTCTTTGGCTGCAGGCGGCCGGAAGCTCCGGCGGCCTCCTGCGGGGTAAACCTGCCTGCTCGAACAGGGCCGCCAAGTCTGACGGCCAGAAGGCAAACAC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCCCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCCCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [51.7-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //