Array 1 376-1862 **** Predicted by CRISPRDetect 2.4 *** >NZ_AGBN01000058.1 Neisseria meningitidis Nm8187 contig00063, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 376 36 94.4 30 ........G...A....................... GCGGAACGGGTTGACAGACTGAATTTGAGT 442 36 97.2 30 ............A....................... ATCACTTTTAAAGGCGGCATCGGCTGGTTT 508 36 100.0 30 .................................... AGGGGTCGTGAATGGAGTTCTTGCAGTTCG 574 36 100.0 30 .................................... TAAGCGTTTCTTTTTTGGTCTGCTTCTGCT 640 36 100.0 30 .................................... AATCAGACCGACTTTACAACGAAGGTTTGA 706 36 100.0 30 .................................... TGCTACCAGCGACAACAGGCATTACGCCCA 772 36 100.0 30 .................................... TGAGAAAGATTTAAGAACTAAGTTCCCATC 838 36 100.0 30 .................................... TCAGCCTCAAATACATCCGCCAAATCGTTG 904 36 100.0 30 .................................... ACACAATCTCCGCCGTTCCAATCAAATGTG 970 36 100.0 30 .................................... CTGATGAAGATACAACCGCACTAACTTTAC 1036 36 100.0 30 .................................... AATGATGTATATAAAATGCCGTAAAAAATG 1102 36 100.0 30 .................................... CGTCTGAAGGTTTGCCCATCTCCTGACAGG 1168 36 100.0 30 .................................... TCGATTGTCTATGAAAGCACTTGATGATTT 1234 36 100.0 30 .................................... CTCTTCATTGAAGAAGTTATAAGCCTTTGT 1300 36 100.0 29 .................................... TTGGTAAAGGTTTCTGTTGCGACCCGAAT 1365 36 100.0 30 .................................... GCCTGCGTACTTGGTACGCTGGTCGCCTCC 1431 36 100.0 30 .................................... TTCATAGATCGATGCATGAGGTTTTCATGG 1497 36 100.0 30 .................................... AGGTCAAAGTGTCAGGCAAATTTAAAGGTG 1563 36 100.0 30 .................................... AAATCCATTTATCGCCCACCCTTTCCGGCC 1629 36 100.0 30 .................................... TGCTGAAATTATGGCAAGTATGGGGCAAAG 1695 36 100.0 30 .................................... TAGCAAACAAGGAATATTCAAAGTCCTTTA 1761 36 100.0 30 .................................... CGGCAATGCGGCGGCTGTGTTGGTTGGCGA 1827 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 23 36 99.6 30 GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Left flank : TTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGGTTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCTGG # Right flank : TACTTCGACGGGAAATCCTTATTTCATAAGGGTTTCCCGTTTTATTTGTTATGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACACAGTCTGTTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATTCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACGCCGGCTTGAAATGACGAAATCATTTTGTCGATGGCAGCCAAGGT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: F [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.40,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.68 Confidence: HIGH] # Array family : NA //