Array 1 69220-67051 **** Predicted by CRISPRDetect 2.4 *** >NZ_RZUI01000015.1 Bifidobacterium tissieri strain RST7 NODE_15_length_69329_cov_79.579940, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================================================================================================================= ================== 69219 29 100.0 32 ............................. TCTGCTGGTATGCGGTCATCATGCGCTGGTCA 69158 29 100.0 32 ............................. GCGACGAGATCGACGCCGATATCCTCAACCTC 69097 29 100.0 32 ............................. CACATGGCGCCGATGCGCATTCCGGTGACGCT 69036 29 100.0 32 ............................. CATAGGGATGATACCGCCACGCTTGTAACCGC 68975 29 100.0 32 ............................. GTCGCCGTCGTCATAGGTCGGGACCTCATCGG 68914 29 96.6 33 ............................A GGCATGTCCTTCAACCCCGAATCAACAATCAAG 68852 29 100.0 32 ............................. GTTCCGGGTTACGGTCTTAAATGGGACACGGG 68791 29 100.0 32 ............................. GCGGTGCCGGAAGTCTCGCGAACATCGCGTTC 68730 29 100.0 32 ............................. CCGTCAAGAATCGTATTGCCGGTTTCCTCGCT 68669 29 100.0 32 ............................. GAGCACCAGAACCCGTCCTCGAAGACCTCACC 68608 29 100.0 32 ............................. CTCCTCAAAAGTTAGTCCGCTGACCGCCCTCG 68547 29 100.0 32 ............................. CGATCCCCTCCTACGGGGAAATGCAGTGACGA 68486 29 100.0 32 ............................. CTGGGTTCGTCCCACTCGCTGCCGTAGTAGTC 68425 29 100.0 32 ............................. GGGACGCCGACTCGTGACGGGTACACGTTCAC 68364 29 100.0 32 ............................. GCGTCCGCGACCGTGTACGCGGATGAGGCCAC 68303 29 100.0 32 ............................. GAATCAGGTAACACGATCCCGCTCCTGTTCGG 68242 29 100.0 43 ............................. GACGGGTGGATGATCTCGATCGGCCCGAACGGCATGTGGAGTC 68170 29 100.0 32 ............................. CCCATTTGAGGGAGCGTGTGGGTGTGGAGGAT 68109 29 100.0 32 ............................. CTTTTTCCTTTCTTCCACTTGGACGCGCATCC 68048 29 100.0 32 ............................. CTCGCGGACAGTTCGGATACGGTCAGCGTGAC 67987 29 100.0 32 ............................. TTTGCCGCCGCGTGGCAGTATTCCTCGTCTGG 67926 29 96.6 32 ............................T TCTGCGCAGTATAGACCGGCGACCCATTGGAC 67865 29 100.0 32 ............................. ACTGCGCGATACCCGGCCGGGAGAGAGTCCTA 67804 29 100.0 32 ............................. CGTACCGGTCGTATGCTCCGGGCTGTGAATCG 67743 29 96.6 33 ............................T TCTCGTTGGACGGGACGGACGCGGTGGCGCGAA 67681 29 100.0 32 ............................. GTGCGCGGCGGCCGCACCATCATCGTCAGCGT 67620 29 96.6 32 .....T....................... TCCCGGAGCTGTTCGCGCTGCCACAACAGGCC 67559 29 93.1 32 .....T..............A........ GGGCCGGCGTTGACCCATCGGAGGGTAACCAT 67498 29 100.0 145 ............................. ATGGCGCAGCCGAGGCCGAGGCCGCCGAAGAGCAGCGCGAATATGCCGAGCTTGTTTTTCATGATGATTCATGGATAATCTGGGAGATGGGGGCCACGACTCCGGATACTGAGGATATTCGGAATTCGCGGCCCTTTCCGTTACC 67324 29 100.0 32 ............................. CTCTGGGAATCCTACAGGAACGGCGGCGCCAC 67263 29 100.0 31 ............................. TCAAGGCCAACAAAAAATCCAAGGCATCACA 67203 29 100.0 33 ............................. CCCATCCGCAACGGACACCCCCACAACGCCATC T [67177] 67140 29 96.6 32 ............................T GCGTCGTCGGATTCGAGTCAACTGGCGCGGGC 67079 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================================================================================================================================= ================== 34 29 99.3 36 GTTTGCCCCGCACACGCGGGGATGATCCG # Left flank : CCTGTCAACCATGCCCCAGGACATGGCGTCAACCATGCCCCGAGACATGCGTCAACTATCCGCTCGAACTAGACACCGGCAACAAGAAAACCGTGCAAGGATTCAAACA # Right flank : CGCAGATCATCAACCAGTGGGCGCGGTTCGTGGTGTCGGCGGCGGCAGACCGCGGAAGACTTCCGCGACGGAAGCGTCACTTGAGTGACGGCAACGTGTTCGAGCTGTCGTTCGACGGTAGAATATTCCGGATAAGCCAAACCGGGTCGAGGATGACAAGATCGGACTACTGGTCGGCCACATAAAACGTACAAACGTAACGTACCGCTACTGAGTTTGATCGAGGTGGTCGAGCGCATCGGCGTTATCAGGGGGCTTGGCCAACTACAAACTTCCCAGACCCAAAGCTATGGTCGGCCGGGCTCGCAGCTGGCCACCGTAGCTGGAGTGGTTCTGGGTATTTCCGTACTCCAACAATCGGGTCTGGGTATTTCTGTATCATGAACACCCCCAACACAGGGTCTTCGTGATACGGAAATACCCAGACTCAGTTATCTATACCGGTTTGACCCAGACTTATCGTCCGGGTATACCCAGACCCAAGTCCGTCGTGTCCGGGT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGCCCCGCACACGCGGGGATGATCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTTGCCCCGCACGCGCGGGGATGATCCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //