Array 1 127461-115737 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJHAK010000003.1 Psychrobacter namhaensis isolate Psychrobacter namhaensis SW-242, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 127460 32 100.0 33 ................................ CCTGATCCATTCGACGAGCCAAAACGCTATTGG 127395 32 100.0 33 ................................ AAATAACTTTTGAGCAGTCGTAGCGCGTGTTTC 127330 32 100.0 32 ................................ CTTATCTAAAAATATGTGATTGCTGCCACGAC 127266 32 100.0 32 ................................ AGTTTGTCAAACAAATCGCTTTACTGGAGCAG 127202 32 100.0 38 ................................ CTATGCTATGGCTTGATGGTGATATGGTCAAAGGTATG 127132 32 100.0 33 ................................ GGATGCTTTAGCTAGATTGCAAGGTGGATTTGA 127067 32 100.0 33 ................................ TTGAATAGCAAAGGCCATCTGAGCATCAAGCGC 127002 32 100.0 34 ................................ GTTGCGATGTGGTTATAATACCTACTAGGTAGTT 126936 32 100.0 33 ................................ GCTAAAGTGTCAGTATTAAAGCTGCTTTTTACA 126871 32 100.0 33 ................................ AGCAGCTCCATAGCAGCGATAGCAGCGTCTTTA 126806 32 100.0 35 ................................ GTATATGCGAACATAGCGTTACTGATTAGGCAAAC 126739 32 100.0 34 ................................ TTATAGCAGGTAGTAATACTATCTATTTACCGCC 126673 32 100.0 33 ................................ TACAAAGGCGCGATGATGCGTAATAGCTGGAAT 126608 32 100.0 32 ................................ GTACTTTACGCGCACCTGATACATAAGCCTTA 126544 32 100.0 33 ................................ TTTATTGGTCATGGCTAAATGAGCCTCAAAGCC 126479 32 100.0 32 ................................ ACCTACACTAAAATCAACAGTTGTGATCTCAA 126415 32 100.0 33 ................................ ACCGTCGTCGTCTTGCTCACCATCTTGACTATC 126350 32 100.0 32 ................................ TAGTTACAGCGCATTAACAATATCTGCGTCTA 126286 32 100.0 32 ................................ CAATCCCATGTAACCTTGCCGTTTTCGTCCAG 126222 32 100.0 35 ................................ TGTTGATACATTACTGACTAACTGCTCACCGTTTG 126155 32 100.0 33 ................................ TCAGCAAGTAGCAGTAGGATTAACTTTCGCATT 126090 32 100.0 34 ................................ AAAATGTACCAGCGTCTCGTCATCATCTAGCGGA 126024 32 100.0 32 ................................ TTTTAGACCAACCATTAGTCTCGTATACACAA 125960 32 100.0 33 ................................ CTAAGTGCGCTGCAGCTCTTGCTGCAACACTAA 125895 32 100.0 34 ................................ ATAATGACAACCTAGCTGAACGCAAATATCTTTA 125829 32 100.0 35 ................................ TGCTGTGCTTTCAATAATGACGATACCGTTGTTTG 125762 32 100.0 33 ................................ CGATCTGAACCGTGTCTTTGCGGTTGGACGCAC 125697 32 100.0 33 ................................ TATCCCCGCGCTCCAGCATAGCCCTGCACAAAT 125632 32 100.0 33 ................................ AGGCTTATAGCTACCAGTCAGCTTGTGGTCATA 125567 32 100.0 33 ................................ CCACGTAAGTTGCACATAACCCATACCCACATG 125502 32 100.0 34 ................................ ACGGCCATTGGTTGCTTGGGCCTTATCAAGACCA 125436 32 100.0 35 ................................ TTTGTCGTCCGTCATCGCATCAAACACGCGGCTAG 125369 32 100.0 33 ................................ AAGCGTCATCTCGCTAAAGTCGTCATTGATTAG 125304 32 100.0 36 ................................ TTATGAGCATCAATAGCAGATTGCACCCATGCAGAC 125236 32 100.0 32 ................................ GCCTTGCCAAAACCTATCAGTGGCAGGCAATC 125172 32 100.0 32 ................................ GTCATAGATGCCGCTAAAACCAAACGCTATCC 125108 32 100.0 32 ................................ ATTAAATCAATCATTTAGCGTTAAGGCCTTGC 125044 32 100.0 34 ................................ GGTACAGCATTGCTGAATCCCGAAATGGCAGGTA 124978 32 100.0 34 ................................ TAATTAAAGATAATAAAGACGGTGACGGCCTTGT 124912 32 100.0 33 ................................ GATATAGTTGATGTTAGATACCCAAAAGACAGC 124847 32 100.0 33 ................................ GTACTGCGGCGAGGAGTTAGGCGAAAAATGGGA 124782 32 100.0 34 ................................ ATCTGTAAGCCTCCTTAGTAGTGTTCGTATATCA 124716 32 100.0 32 ................................ TTTAATATGGTTGAGATATCCAAGAAGAACCG 124652 32 100.0 33 ................................ GGATGAGTGCGATAAGTATGAGGTGAGTGATGA 124587 32 100.0 32 ................................ AAAAAGGCACGAATAGCGATGATTTGGATCAG 124523 32 100.0 34 ................................ TTTTGTTGAGATCCGCATTTTTGGCGCTGTCTTA 124457 32 100.0 35 ................................ TTTAACACGCTCGCCTAATGTTTTCATGAAAATAC 124390 32 100.0 32 ................................ CGCTATAGACCAAGAAGTCTATCGGTCGGGGC 124326 32 100.0 33 ................................ GATCAATTTTTGCTTTAACATAGCAATCCCCTT 124261 32 100.0 32 ................................ TTAGTTAGCTTTCTAGGTGTTAGTGCATGGTA 124197 32 100.0 33 ................................ ATGTAATGCTAGTATGTTTTTATCACTAGATAA 124132 32 100.0 33 ................................ TGTAGCAACCTCAGCCCTAGAACCCAACCTTAC 124067 32 100.0 32 ................................ TTATCACCAAAGCCTGTATCACCTGCGACGCT 124003 32 100.0 33 ................................ ACTACCAAAGCTCATTTTGTGCCCTCTACTGGA 123938 32 100.0 35 ................................ GACTCAAAGTCGTTATCCGAAAGTCAGCAAGACAG 123871 32 100.0 33 ................................ TTAGATGGTATCAATGCAGATGATGGCACAACC 123806 32 100.0 33 ................................ TCTACAACCTGCGATTTTGGCTAGAGAAAAACA 123741 32 100.0 33 ................................ ATGGCTGGTGGTTGGAAACGTGAACGACAGATC 123676 32 100.0 32 ................................ TTGGTGCCATAGATGGCGCTTGACACTGCTAA 123612 32 100.0 34 ................................ TACTGTCAACTCAGTTGTCTGGCTTAATGATGTG 123546 32 100.0 32 ................................ GTATTGAAGTGGCAATCACGTTCCCTGATGAT 123482 32 100.0 32 ................................ ACAGATTACAAGGTTATGGACGTTGTTCAGAT 123418 32 100.0 33 ................................ AAGATTGCCGATAGCCGAGGTCGTGAGTTTATC 123353 32 100.0 34 ................................ TTTTAGACCAACCATTAGTCTCGTATACACAAGC 123287 32 100.0 33 ................................ TTTGCCGTCCTTTGCTCTTTGTATTAATCGGTC 123222 32 100.0 35 ................................ TATCAGCCCAAGCGCAGGGTGGGTTGTTATGACGG 123155 32 100.0 33 ................................ CAATCCCTCATTAACCAGTAACCAATGATTGTG 123090 32 100.0 33 ................................ GTCATACTCTCTCTTAATCTTTGCTCGCAATTC 123025 32 100.0 33 ................................ CCACAGAAACGCGCTGAGAACAAACCAAACGGT 122960 32 100.0 32 ................................ ATTAACCTAGTCACTGGTAAATCAATCGGTCT 122896 32 100.0 34 ................................ ACCGTTGACGCCTTTTATGATGTAGTCGCCAAAA 122830 32 100.0 33 ................................ TGAACCGATACTGGCTACCCTATGTAGTACGAA 122765 32 100.0 33 ................................ GCATGTGCCTAGTATCTGCTTACCCGCTTTGAC 122700 32 100.0 35 ................................ ATCTTTGCGTCCTTGCTCAATCATTCCCCATGCTC 122633 32 100.0 34 ................................ ATTAAAAATATTGGTCACAGCCATTGCGCCAAAG 122567 32 100.0 33 ................................ CAAAGCGACCAAGCGGGCGCAGCAAGCGATTTT 122502 32 100.0 33 ................................ ACTTGCACATCACCACCAACTTTGTCACCTCGA 122437 32 100.0 34 ................................ GTATATTTGAACCTTTACACCTTGAAACGATGTT 122371 32 100.0 34 ................................ GACAGTGAGTATTTGGTCTTGCATCGCGTGCAAC 122305 32 100.0 33 ................................ ACGTAGCATTGAGCCTGCATTAGCACGTTTGCC 122240 32 100.0 34 ................................ AGGCTAACTACAATATAAAAAGGAAGCTAGGATG 122174 32 100.0 33 ................................ TAACTTAGGTCAGGGCATTGGTTTCGCTAAAGC 122109 32 100.0 34 ................................ TACAGACACCAAAGCTACACGTAAGAGGTAGTGG 122043 32 100.0 32 ................................ ACTTGATGGCTTAGTTGGTTTATCACCTATCA 121979 32 100.0 34 ................................ ACAATATCAGTATCTTATGGCGTTTTTGCGAGTC 121913 32 100.0 33 ................................ TCAGGAATTGGACGGTAACGGTTATGCGGAGAT 121848 32 100.0 34 ................................ GACAAGGGCAACCGAGGGGGCTTTATCACTCAAA 121782 32 100.0 33 ................................ ACTGGGAATTGAGTTAACAAACTCTCTGAATTT 121717 32 100.0 34 ................................ GATATCCTGCTCGTCATCAATAACCTCGTTATCT 121651 32 100.0 33 ................................ GCACCAATCAAGCTAACGAGAATAATAATATTC 121586 32 100.0 33 ................................ TTACGAAACCTACATTATCGCAACATCATCTTA 121521 32 100.0 33 ................................ TATGATATTCAAACTTAAACTGGATCCCCAGTC 121456 32 100.0 32 ................................ TGTGGTCTAAATTCAACGGTAAAGCGGTTTTT 121392 32 100.0 34 ................................ GATATCCTGCTCGTCATCAATAACCTCGTTATCT 121326 32 100.0 33 ................................ GCACCAATCAAGCTAACGAGAATAATAATATTC 121261 32 100.0 33 ................................ TTACGAAACCTACATTATCGCAACATCATCTTA 121196 32 100.0 33 ................................ TATGATATTCAAACTTAAACTGGATCCCCAGTC 121131 32 100.0 32 ................................ TGTGGTCTAAATTCAACGGTAAAGCGGTTTTT 121067 32 100.0 33 ................................ GTGAGCCGTGCTGCAACTTCGCCATTGCAGCCG 121002 32 100.0 33 ................................ CCATTCTTTCGGTAACGTCCGCTTGCCGTCATG 120937 32 100.0 33 ................................ AACCCAGCTACTACCGTCTACCATGACTAGGCC 120872 32 100.0 34 ................................ TGAGCTACCTATAGCAGCCACGCACAGATTGCAG 120806 32 100.0 34 ................................ TCTGCCGTACCTGTAAGCCCAAGCTCATCAATCG 120740 32 100.0 34 ................................ CTATTACTATTTATCTGCATATTGACGTTATTTA 120674 32 100.0 33 ................................ CATTATTTGCGTGAACTAAACTTCCAATTTCGC 120609 32 100.0 32 ................................ TGAATGACATCGAGCAAGACGAAGCCACTATA 120545 32 100.0 33 ................................ CATTATTTGCGTGAACTAAACTTCCAATTTCGC 120480 32 100.0 34 ................................ AATGCTTACAGAGGTACAGGGCAAAATCGGATTA 120414 32 100.0 32 ................................ AGTCTAGAGATGCGCCGTATCGATATGACCAG 120350 32 100.0 32 ................................ CGCTACCTACGCAAGCCATTGAGATTTTAGAG 120286 32 100.0 33 ................................ CCGCGACTAGAAGCCATGCGTCTTTCTCCATTA 120221 32 100.0 33 ................................ TCGGCTATACCTAACTGCCCACCTGTGGCTGTG 120156 32 100.0 33 ................................ TCCGGTATGCCTACTTACAAGCAGGTTATTTAA 120091 32 100.0 34 ................................ GGTTGTCAGCCCCTCTTTTTTTGAAGGTAGAAAC 120025 32 100.0 32 ................................ ACATTATCGTTATGCTTTTTGATAAATCCGCC 119961 32 100.0 34 ................................ AGGAATACGAGCAGTTAGCGCAGGGCGTAGCAAG 119895 32 100.0 33 ................................ CAGACGAGCCGATTAGCGACTATACGACCTACG 119830 32 100.0 34 ................................ GATCAATTTTTGCTTTAACATATCGCTCTCCTTA 119764 32 100.0 32 ................................ GCACTGATTGCCCAATCGCTTATGAGACAGCA 119700 32 100.0 33 ................................ CAAGCGGTGCGTCATCAATATATTTATCAAGCG 119635 32 100.0 35 ................................ GTGACCATCTTGCAGCAACTCACCCAGCTCAGTGA 119568 32 100.0 33 ................................ TCTCAATTGAACGCTGGATTAAATAGCGCCAAT 119503 32 100.0 33 ................................ TGACGGTATGGCGATTAACTGAGGGCGTTAGAG 119438 32 100.0 33 ................................ TCATGAGTGGGTTGGTTCTGGTGGTTGTCTTGA 119373 32 100.0 33 ................................ ATCCTCACCGTTGCAATGATGTGAACCTTGCTT 119308 32 100.0 33 ................................ CATTCGCGCTGATCGTTATTCCAATAATCATGT 119243 32 100.0 35 ................................ GGTTTTAGAACCACCGGGGGGCAAGTTAAAGATAA 119176 32 100.0 34 ................................ TGCCACTGGCTGCTGAGGCTGTAAGGCGATTTGT 119110 32 100.0 33 ................................ TTAATAACTATCGCTCAGTCAAACAGGGTACAA 119045 32 100.0 34 ................................ ATAAATATCCTAAAAAAAGAACCCATCTGACTTT 118979 32 100.0 32 ................................ CTACTGTGAAATGAAACTATATCTTATAACAA 118915 32 100.0 34 ................................ GGACCTGCTCAGTAGGTTTGTCTTTGTAAAGGTA 118849 32 100.0 35 ................................ ACAGCACAAGACTTAGCCAATTACGACACTATTAT 118782 32 100.0 34 ................................ CGCTATTAGTACACATGTCATAAATGCTCATAAT 118716 32 100.0 34 ................................ CTGCACGACTGAGCCATCGTCTTTATATAGCTTG 118650 32 100.0 32 ................................ CTGATCCAAGTCGTCGCTATTCGTGCCTTTTT 118586 32 100.0 35 ................................ TGCAATCTTGTCTTTAACGCGCTCATCTATTAGTT 118519 32 100.0 32 ................................ ACCCGTTTGGCCAATGTGTCTAGATCTTGTTC 118455 32 100.0 33 ................................ ATAGATAACGCTTGTGTCGTTGCCGTCACGCAA 118390 32 100.0 35 ................................ AGCTCTTCTCGGACGCACGGCAACCTCAACATCGG 118323 32 100.0 32 ................................ TTTGGACCGACCCTCACGGCAACACCAAACAA 118259 32 100.0 32 ................................ GCCTTGGCAGTACACTTGCATCAACAACAAGC 118195 32 100.0 33 ................................ TTTGTACTCAATCTCAATACGAGCTTTTAATGA 118130 32 100.0 32 ................................ AACGGTGACGCTCAAGCGGCCAGTCAAGCCTA 118066 32 100.0 35 ................................ AAAGCACTGTTAGCTACCGCTGACAGCAAGCCGCC 117999 32 100.0 34 ................................ CACACAGCGTGTAAAATAATATTAATTTGAACAA 117933 32 100.0 34 ................................ CCCTTTATGTTTGAAATACAGATGTTTGTTTAGA 117867 32 100.0 33 ................................ ACGTACGTAATCTGTAGTATATGTGTCGGACTG 117802 32 100.0 36 ................................ GCTACGAGTTAAACGAGCAATAAAAAACCCTGACCA 117734 32 100.0 35 ................................ TTGACCTGTCTCAGTAGTGCCAGCGGTCATGTCAA 117667 32 100.0 33 ................................ CCAGTTACTAGCATCATAGCCACGACCTAACCA 117602 32 100.0 33 ................................ ACCAATATCATGTTTATTAATCGTGTTACTCAT 117537 32 100.0 32 ................................ AAGCGACTATCGTTAATAGTCTCACTATCGAG 117473 32 100.0 33 ................................ TGCTGCTACTTTTGCCATGACTGGTAAATTAGC 117408 32 100.0 34 ................................ TTTTGCTGATTAGTCATACCGTCATCTTCTGCGA 117342 32 100.0 33 ................................ ATGGTCTGGGTTATACCAAGCATGGTCAGGATT 117277 32 100.0 34 ................................ GGTTTTGCCCTCAATGGCAGCGTCACCAAGTTTG 117211 32 100.0 34 ................................ GTCAGACGCTCTATACTCGTCCGTATAGCCTTGC 117145 32 100.0 33 ................................ TAAGTCGATGTTGTGAAAGCTCATACTGGTAAC 117080 32 100.0 34 ................................ ACGCTCAGAAGGGTTCAGGTTTGACCAATAGTTG 117014 32 100.0 33 ................................ TAAGTTTGTTTGTTGAAAGCCTGTCAGTTGCCT 116949 32 100.0 34 ................................ AATTATAAAAAAGAATTTATGCAAACAGAAAAGT 116883 32 100.0 33 ................................ AATGAAGTACCAGTAATAGGCCTTGCCGCTAAG 116818 32 100.0 33 ................................ AACAACCATATTGATTGTCGGCCTACTGTCGCG 116753 32 100.0 36 ................................ CCTGCTAACGACGAAAGCCGTATTGATAGCGTCAAG 116685 32 100.0 34 ................................ ATGAACGAGTCAAAGGCGTTGGCAGTACAGGTCG 116619 32 100.0 34 ................................ TTCTGCGTTACTTATCGCGAATGTTCGCACACGG 116553 32 100.0 33 ................................ TTTATGATCGATATAAACGCTGTAAGTGACCGG 116488 32 100.0 33 ................................ CATCAGCCCAATTCAGCTCCATTGGTCTCTCAG 116423 32 100.0 33 ................................ TCTTCATTGACGAGTTTTTCAAGCAAGTTAAAG 116358 32 100.0 35 ................................ GATGCAAATTGGATTTTAGAGCGTTGAGAATTAAG 116291 32 100.0 35 ................................ CTCTACATACCAAGTGCCAAGTTCTTCACGCGACG 116224 32 100.0 33 ................................ TGCTACGTGCTATGAGCGTACTAGACGCTAAGG 116159 32 100.0 34 ................................ ATAATACGTCACCCTCTCAAATCCCTGCATTACG 116093 32 100.0 34 ................................ GCCTAAGCCCTGCTCAACGAACCAACCACTCCAG 116027 32 96.9 33 ..........................C..... GATGTAACCGTTGACCTTAGCCACCTCTTTGAT 115962 32 96.9 32 ..........................C..... AACAAAGACAGCTTGGCAAGTTATCCGCATAA 115898 32 96.9 33 ..........................C..... AATTATGCAAAAGACGTGCTGGTATAGATTGCA 115833 32 96.9 33 ..........................C..... ATCGCGCACAGACTGCAATGCTTTAATCTCAAG 115768 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ====================================== ================== 180 32 99.9 33 GTCGCACCCATCACGGGTGCGTGGATTGAAAC # Left flank : CACCTCCAGTGCTAAGCGTCTGCGCCACATTGCCAAGCACTGCTTAAACTATGGGCAGCGGGTACAATACTCGGTGTTTGAAATAGAAGTCAATCCTGCCGAATGGACGGCACTAAGAGCAAAGCTCGAAGACATCATTAACCCTGATATTGATAGTTTGCGTTACTATTATCTTGGTAAAAACTGGCAAAACAAAGTAGAACACATTGGCGCAAAACCTGTGCTAGACTTAAACGATGTACTGCTTTTTTAGTCATGATAACCACAGTAAAACCTATTATTTGACTGTCATAAGGTCAATGCGAACCTATAGCGTACATAAAATCTCTAGGAGACTCGCAAAGGGGTCGTGATGCTACTTAAAAACTTGATTTTAATACTTTTATTTTTACACATTAAAAATTTGGCAAGCGATATGCTTGCCAAATTCGCCGATGGTTTACAGGTTCGCAAATTCCAAGGTTTAATCGTAACCTTATTAGGGACTTAGACCATGGGCT # Right flank : GTATTTTTTTTGCTAATCAATAAAAAAGAGGCTGTAGTAGATAAGGATTAAATATCACACCATTTTCTCAGAGTTTTAAGCTGATGAGACGATGCCCCCTAGTTAAATCTGAACTCGCTCACATCCAATGCATTGTAACTTCGATAGCTGTCAGTATAAAAAAGCTATCAGGCTTGATTTTACGCTTGATGACAGGCATGAGAGTGGTCTGTTTGGTGTCTGCTACAACAGGGGGGATAGACATTATCGTTTCGTTTGAGGATACCAAACACGGCTCTTTTGCCTTTGCGTACACTGCTAAAGTAACTCTCATTTAATTCGATCTCACCCTCAAAAAGCTCATCGGCTTCACCCTAAAAACTAACTTGGGAGATTTTATCGAGCAGTCTGACGATAATAGTAAAACCCTATCCGCCTTGGCATTTTATAGATTGACCCCTAGTCTATTTTGGTTGTTCTCAAACTCCATATATCTAATTATCCTTCAGTTGGCTTATCAA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCATCACGGGTGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTCACGGGTGCGTGGATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.70,-4.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,9.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //